RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 TGP01266 2768 aa4.41□□□□□ -1.7
HERPUD1-209ENST00000564678 A0A0G2JQZ4 141 aa4.4□□□□□ -1.7
HERPUD1-209ENST00000564678 ZNF861PO60384 105 aa4.4□□□□□ -1.7
HERPUD1-209ENST00000564678 PSORS1C2Q9UIG4 136 aa4.4□□□□□ -1.7
HERPUD1-209ENST00000564678 K7EQZ3 153 aa4.4□□□□□ -1.71
HERPUD1-209ENST00000564678 H7BZZ5 65 aa4.39□□□□□ -1.71
HERPUD1-209ENST00000564678 Q8N1X5 172 aa4.39□□□□□ -1.71
HERPUD1-209ENST00000564678 TMEM254Q8TBM7 123 aa4.38□□□□□ -1.71
HERPUD1-209ENST00000564678 HCG22E2RYF7 251 aa4.38□□□□□ -1.71
HERPUD1-209ENST00000564678 J3KT08 172 aa4.38□□□□□ -1.71
HERPUD1-209ENST00000564678 LINC00472Q9H8W2 130 aa4.38□□□□□ -1.71
HERPUD1-209ENST00000564678 LCE6AA0A183 80 aa4.36□□□□□ -1.71
HERPUD1-209ENST00000564678 LINC00313P59037 77 aa4.36□□□□□ -1.71
HERPUD1-209ENST00000564678 PRR15Q8IV56 129 aa4.36□□□□□ -1.71
HERPUD1-209ENST00000564678 SNURFQ9Y675 71 aa4.36□□□□□ -1.71
HERPUD1-209ENST00000564678 DNAH8Q96JB1 4490 aa4.36□□□□□ -1.71
HERPUD1-209ENST00000564678 A8MWP4 228 aa4.36□□□□□ -1.71
HERPUD1-209ENST00000564678 IGLV7-43P04211 117 aa4.35□□□□□ -1.71
HERPUD1-209ENST00000564678 ATP5EP56381 51 aaPredicted RBP4.35□□□□□ -1.71
HERPUD1-209ENST00000564678 DEFB116Q30KQ4 102 aa4.35□□□□□ -1.71
HERPUD1-209ENST00000564678 SRRM2Q9UQ35 2752 aaKnown RBP4.34□□□□□ -1.71
HERPUD1-209ENST00000564678 NDUFB1O75438 58 aa4.34□□□□□ -1.72
HERPUD1-209ENST00000564678 KRTAP29-1A8MX34 341 aaPredicted RBP4.33□□□□□ -1.72
HERPUD1-209ENST00000564678 ALMS1Q8TCU4 4167 aa4.33□□□□□ -1.72
HERPUD1-209ENST00000564678 KRTAP10-2P60368 255 aa4.33□□□□□ -1.72
HERPUD1-209ENST00000564678 Q6ZSA8 131 aa4.33□□□□□ -1.72
HERPUD1-209ENST00000564678 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
HERPUD1-209ENST00000564678 FRAS1Q86XX4 4008 aa4.32□□□□□ -1.72
HERPUD1-209ENST00000564678 IGLV7-46A0A075B6I9 117 aa4.32□□□□□ -1.72
HERPUD1-209ENST00000564678 DNAH5Q8TE73 4624 aa4.32□□□□□ -1.72
HERPUD1-209ENST00000564678 MOBPQ13875 183 aa4.31□□□□□ -1.72
HERPUD1-209ENST00000564678 CASC2Q6XLA1 102 aa4.31□□□□□ -1.72
HERPUD1-209ENST00000564678 SSBP3-AS1Q7Z2R9 100 aa4.31□□□□□ -1.72
HERPUD1-209ENST00000564678 Q96NJ1 140 aa4.31□□□□□ -1.72
HERPUD1-209ENST00000564678 SERP1Q9Y6X1 66 aa4.31□□□□□ -1.72
HERPUD1-209ENST00000564678 DNAH11Q96DT5 4516 aa4.31□□□□□ -1.72
HERPUD1-209ENST00000564678 WFDC13Q8IUB5 93 aa4.31□□□□□ -1.72
HERPUD1-209ENST00000564678 SACSQ9NZJ4 4579 aa4.31□□□□□ -1.72
HERPUD1-209ENST00000564678 ZCCHC13Q8WW36 166 aaKnown RBP4.3□□□□□ -1.72
HERPUD1-209ENST00000564678 H3BPC8 53 aa4.3□□□□□ -1.72
HERPUD1-209ENST00000564678 HRCT1Q6UXD1 115 aa4.3□□□□□ -1.72
HERPUD1-209ENST00000564678 HYDINQ4G0P3 5121 aa4.29□□□□□ -1.72
HERPUD1-209ENST00000564678 KRTAP16-1A8MUX0 517 aa4.29□□□□□ -1.72
HERPUD1-209ENST00000564678 ANAPC11Q9NYG5 84 aa4.29□□□□□ -1.72
HERPUD1-209ENST00000564678 A8MUN3 132 aa4.29□□□□□ -1.72
HERPUD1-209ENST00000564678 MMP24-AS1A0A0U1RRL7 71 aa4.28□□□□□ -1.72
HERPUD1-209ENST00000564678 hDV103S1A0JD37 113 aa4.28□□□□□ -1.72
HERPUD1-209ENST00000564678 KRTAP10-1P60331 282 aa4.28□□□□□ -1.72
HERPUD1-209ENST00000564678 ASB16-AS1Q495Z4 193 aa4.28□□□□□ -1.72
HERPUD1-209ENST00000564678 TP53AIP1Q9HCN2 124 aa4.27□□□□□ -1.73
HERPUD1-209ENST00000564678 FAT2Q9NYQ8 4349 aa4.26□□□□□ -1.73
HERPUD1-209ENST00000564678 A0A1B0GVX0 72 aa4.26□□□□□ -1.73
HERPUD1-209ENST00000564678 FAM229BQ4G0N7 80 aa4.26□□□□□ -1.73
HERPUD1-209ENST00000564678 C8orf17Q9NRJ1 99 aa4.26□□□□□ -1.73
HERPUD1-209ENST00000564678 PKD1P98161 4303 aa4.26□□□□□ -1.73
HERPUD1-209ENST00000564678 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
HERPUD1-209ENST00000564678 Q5XG85 94 aa4.24□□□□□ -1.73
HERPUD1-209ENST00000564678 H0Y9P7 68 aa4.24□□□□□ -1.73
HERPUD1-209ENST00000564678 LINC00208Q96KT6 92 aa4.24□□□□□ -1.73
HERPUD1-209ENST00000564678 TRAV22A0A0B4J277 110 aa4.23□□□□□ -1.73
HERPUD1-209ENST00000564678 KMT2CQ8NEZ4 4911 aaKnown RBP4.23□□□□□ -1.73
HERPUD1-209ENST00000564678 MRPL34Q9BQ48 92 aaKnown RBP4.23□□□□□ -1.73
HERPUD1-209ENST00000564678 CYP4F30PQ9H0H9 118 aa4.23□□□□□ -1.73
HERPUD1-209ENST00000564678 LRP1BQ9NZR2 4599 aa4.22□□□□□ -1.73
HERPUD1-209ENST00000564678 SPANXA2-OT1Q8N9U9 137 aa4.21□□□□□ -1.73
HERPUD1-209ENST00000564678 KRTAP13-2Q52LG2 175 aa4.21□□□□□ -1.74
HERPUD1-209ENST00000564678 C1orf64Q8NEQ6 169 aa4.21□□□□□ -1.74
HERPUD1-209ENST00000564678 KRTAP1-4P0C5Y4 121 aa4.2□□□□□ -1.74
HERPUD1-209ENST00000564678 ADM2Q7Z4H4 148 aa4.2□□□□□ -1.74
HERPUD1-209ENST00000564678 VPS13BQ7Z7G8 4022 aa4.19□□□□□ -1.74
HERPUD1-209ENST00000564678 SPINK6Q6UWN8 80 aa4.19□□□□□ -1.74
HERPUD1-209ENST00000564678 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
HERPUD1-209ENST00000564678 CAMK2N1Q7Z7J9 78 aa4.19□□□□□ -1.74
HERPUD1-209ENST00000564678 LIMD2Q9BT23 127 aa4.19□□□□□ -1.74
HERPUD1-209ENST00000564678 KRTAP19-1Q8IUB9 90 aa4.17□□□□□ -1.74
HERPUD1-209ENST00000564678 FP248Q71RG6 208 aaPredicted RBP4.17□□□□□ -1.74
HERPUD1-209ENST00000564678 PKHD1P08F94 4074 aa4.16□□□□□ -1.74
HERPUD1-209ENST00000564678 SPINK1P00995 79 aa4.16□□□□□ -1.74
HERPUD1-209ENST00000564678 RYR2Q92736 4967 aa4.16□□□□□ -1.74
HERPUD1-209ENST00000564678 A0A1B0GVY2 172 aa4.15□□□□□ -1.75
HERPUD1-209ENST00000564678 TYMSOSQ8TAI1 123 aa4.15□□□□□ -1.75
HERPUD1-209ENST00000564678 RYR3Q15413 4870 aa4.15□□□□□ -1.75
HERPUD1-209ENST00000564678 RPS29P62273 56 aaKnown RBP4.14□□□□□ -1.75
HERPUD1-209ENST00000564678 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
HERPUD1-209ENST00000564678 SPAG11AQ6PDA7 123 aa4.14□□□□□ -1.75
HERPUD1-209ENST00000564678 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
HERPUD1-209ENST00000564678 Q8N9P0 234 aaPredicted RBP4.14□□□□□ -1.75
HERPUD1-209ENST00000564678 KRTAP13-3Q3SY46 172 aa4.12□□□□□ -1.75
HERPUD1-209ENST00000564678 DYNC1H1Q14204 4646 aaKnown RBP4.11□□□□□ -1.75
HERPUD1-209ENST00000564678 IGKV2-30P06310 120 aa4.11□□□□□ -1.75
HERPUD1-209ENST00000564678 Q1T7F1 81 aa4.11□□□□□ -1.75
HERPUD1-209ENST00000564678 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
HERPUD1-209ENST00000564678 Q5W150 140 aa4.1□□□□□ -1.75
HERPUD1-209ENST00000564678 PCOTHQ58A44 107 aa4.1□□□□□ -1.75
HERPUD1-209ENST00000564678 LINC00304Q8N9R0 145 aa4.1□□□□□ -1.75
HERPUD1-209ENST00000564678 LCA10Q71F78 164 aa4.09□□□□□ -1.75
HERPUD1-209ENST00000564678 SMR3BP02814 79 aaPredicted RBP4.09□□□□□ -1.76
HERPUD1-209ENST00000564678 KRTAP10-4P60372 401 aaPredicted RBP4.07□□□□□ -1.76
HERPUD1-209ENST00000564678 APOBP04114 4563 aaKnown RBP4.07□□□□□ -1.76
HERPUD1-209ENST00000564678 A6NED7 52 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms