RNA–Protein interactions for RNA: ENST00000564674.5

DENND4A-206, Transcript of DENN domain containing 4A, humanhuman

TSL 1 (best)

Gene DENND4A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-206ENST00000564674 WWC2-AS2Q96NR7 200 aa10.96□□□□□ -0.66
DENND4A-206ENST00000564674 DNAH3Q8TD57 4116 aa10.96□□□□□ -0.66
DENND4A-206ENST00000564674 RBM12B-AS1Q9P1G2 102 aa10.94□□□□□ -0.66
DENND4A-206ENST00000564674 CDC42SE1Q9NRR8 79 aa10.94□□□□□ -0.66
DENND4A-206ENST00000564674 SPACA4Q8TDM5 124 aa10.93□□□□□ -0.66
DENND4A-206ENST00000564674 Q6ZR54 194 aa10.93□□□□□ -0.66
DENND4A-206ENST00000564674 LINC01558Q9Y6Z2 57 aa10.93□□□□□ -0.66
DENND4A-206ENST00000564674 FBN3Q75N90 2809 aa10.92□□□□□ -0.66
DENND4A-206ENST00000564674 PLECQ15149 4684 aaKnown RBP10.92□□□□□ -0.66
DENND4A-206ENST00000564674 DNHD1Q96M86 4753 aa10.91□□□□□ -0.66
DENND4A-206ENST00000564674 Q6ZRN7 208 aaPredicted RBP10.89□□□□□ -0.67
DENND4A-206ENST00000564674 ASB16-AS1Q495Z4 193 aa10.88□□□□□ -0.67
DENND4A-206ENST00000564674 A6NN06 94 aa10.88□□□□□ -0.67
DENND4A-206ENST00000564674 RTL8CO15255 209 aa10.88□□□□□ -0.67
DENND4A-206ENST00000564674 A0A087WTM6 91 aa10.86□□□□□ -0.67
DENND4A-206ENST00000564674 MEGF8Q7Z7M0 2845 aa10.85□□□□□ -0.67
DENND4A-206ENST00000564674 IGLV5-52A0A0A0MRZ9 124 aa10.85□□□□□ -0.67
DENND4A-206ENST00000564674 ZNF706Q9Y5V0 76 aaPredicted RBP10.85□□□□□ -0.67
DENND4A-206ENST00000564674 ZNF861PO60384 105 aa10.84□□□□□ -0.67
DENND4A-206ENST00000564674 PRAC1Q96KF2 57 aa10.83□□□□□ -0.68
DENND4A-206ENST00000564674 LINC00483Q53H64 154 aa10.82□□□□□ -0.68
DENND4A-206ENST00000564674 DNAH8Q96JB1 4490 aa10.78□□□□□ -0.68
DENND4A-206ENST00000564674 PLAC8Q9NZF1 115 aa10.77□□□□□ -0.69
DENND4A-206ENST00000564674 ADM2Q7Z4H4 148 aa10.76□□□□□ -0.69
DENND4A-206ENST00000564674 ACYP2P14621 99 aa10.75□□□□□ -0.69
DENND4A-206ENST00000564674 C7orf65Q6ZTY9 151 aa10.75□□□□□ -0.69
DENND4A-206ENST00000564674 IGKV2D-30A0A075B6S6 120 aa10.73□□□□□ -0.69
DENND4A-206ENST00000564674 IGKV2-30P06310 120 aa10.73□□□□□ -0.69
DENND4A-206ENST00000564674 NUPR2A6NF83 97 aa10.72□□□□□ -0.69
DENND4A-206ENST00000564674 KMT2AQ03164 3969 aa10.72□□□□□ -0.69
DENND4A-206ENST00000564674 A0A1B0GU69 56 aa10.7□□□□□ -0.7
DENND4A-206ENST00000564674 LINC00313P59037 77 aa10.7□□□□□ -0.7
DENND4A-206ENST00000564674 STARD9Q9P2P6 4700 aa10.7□□□□□ -0.7
DENND4A-206ENST00000564674 IGLV7-43P04211 117 aa10.69□□□□□ -0.7
DENND4A-206ENST00000564674 SPINK1P00995 79 aa10.69□□□□□ -0.7
DENND4A-206ENST00000564674 KRTAP13-3Q3SY46 172 aa10.64□□□□□ -0.71
DENND4A-206ENST00000564674 DNAH17Q9UFH2 4485 aa10.64□□□□□ -0.71
DENND4A-206ENST00000564674 LY6G6CO95867 125 aa10.62□□□□□ -0.71
DENND4A-206ENST00000564674 HECTD4Q9Y4D8 3996 aa10.6□□□□□ -0.71
DENND4A-206ENST00000564674 C1orf134Q5TEV5 83 aa10.57□□□□□ -0.72
DENND4A-206ENST00000564674 DMAC1Q96GE9 116 aa10.57□□□□□ -0.72
DENND4A-206ENST00000564674 FAM229AH3BQW9 127 aa10.56□□□□□ -0.72
DENND4A-206ENST00000564674 DNAH2Q9P225 4427 aa10.53□□□□□ -0.72
DENND4A-206ENST00000564674 KRTAP10-2P60368 255 aa10.53□□□□□ -0.72
DENND4A-206ENST00000564674 Q8N1X5 172 aa10.52□□□□□ -0.73
DENND4A-206ENST00000564674 C8orf87E5RJ46 101 aa10.52□□□□□ -0.73
DENND4A-206ENST00000564674 MIR22HGQ0VDD5 57 aa10.52□□□□□ -0.73
DENND4A-206ENST00000564674 DNAH6Q9C0G6 4158 aa10.52□□□□□ -0.73
DENND4A-206ENST00000564674 KRTAP13-2Q52LG2 175 aa10.51□□□□□ -0.73
DENND4A-206ENST00000564674 SSBP3-AS1Q7Z2R9 100 aa10.5□□□□□ -0.73
DENND4A-206ENST00000564674 VPS13DQ5THJ4 4388 aa10.5□□□□□ -0.73
DENND4A-206ENST00000564674 PRKDCP78527 4128 aaKnown RBP10.49□□□□□ -0.73
DENND4A-206ENST00000564674 DNAH11Q96DT5 4516 aa10.46□□□□□ -0.74
DENND4A-206ENST00000564674 UQCR11O14957 56 aa10.45□□□□□ -0.74
DENND4A-206ENST00000564674 DYNC2H1Q8NCM8 4307 aaKnown RBP10.43□□□□□ -0.74
DENND4A-206ENST00000564674 FLG2Q5D862 2391 aaPredicted RBP10.42□□□□□ -0.74
DENND4A-206ENST00000564674 C4orf48Q5BLP8 95 aa10.39□□□□□ -0.75
DENND4A-206ENST00000564674 SPATA8Q6RVD6 105 aa10.39□□□□□ -0.75
DENND4A-206ENST00000564674 ALMS1Q8TCU4 4167 aa10.37□□□□□ -0.75
DENND4A-206ENST00000564674 LRP1BQ9NZR2 4599 aa10.36□□□□□ -0.75
DENND4A-206ENST00000564674 KRTAP16-1A8MUX0 517 aa10.35□□□□□ -0.75
DENND4A-206ENST00000564674 PLA2G1BP04054 148 aaKnown RBP10.35□□□□□ -0.75
DENND4A-206ENST00000564674 KRTAP10-1P60331 282 aa10.35□□□□□ -0.75
DENND4A-206ENST00000564674 CSAG1Q6PB30 78 aa10.35□□□□□ -0.75
DENND4A-206ENST00000564674 TYMSOSQ8TAI1 123 aa10.3□□□□□ -0.76
DENND4A-206ENST00000564674 LINC01554Q52M75 96 aa10.29□□□□□ -0.76
DENND4A-206ENST00000564674 C9orf92A6NGG3 77 aa10.28□□□□□ -0.76
DENND4A-206ENST00000564674 KRTAP1-4P0C5Y4 121 aa10.23□□□□□ -0.77
DENND4A-206ENST00000564674 DNAH5Q8TE73 4624 aa10.23□□□□□ -0.77
DENND4A-206ENST00000564674 DMBT1Q9UGM3 2413 aaPredicted RBP10.23□□□□□ -0.77
DENND4A-206ENST00000564674 SMR3BP02814 79 aaPredicted RBP10.18□□□□□ -0.78
DENND4A-206ENST00000564674 CRIPTQ9P021 101 aa10.18□□□□□ -0.78
DENND4A-206ENST00000564674 KRTAP21-3Q3LHN1 58 aa10.17□□□□□ -0.78
DENND4A-206ENST00000564674 VPS13BQ7Z7G8 4022 aa10.17□□□□□ -0.78
DENND4A-206ENST00000564674 Q6ZSA8 131 aa10.11□□□□□ -0.79
DENND4A-206ENST00000564674 HYDINQ4G0P3 5121 aa10.09□□□□□ -0.79
DENND4A-206ENST00000564674 H0YAA0 97 aa10.07□□□□□ -0.8
DENND4A-206ENST00000564674 LINC00304Q8N9R0 145 aa10.07□□□□□ -0.8
DENND4A-206ENST00000564674 FAT2Q9NYQ8 4349 aa10.06□□□□□ -0.8
DENND4A-206ENST00000564674 A0A1B0GU33 70 aa10.01□□□□□ -0.81
DENND4A-206ENST00000564674 H3BS24 57 aa9.97□□□□□ -0.81
DENND4A-206ENST00000564674 KRTAP3-1Q9BYR8 98 aa9.95□□□□□ -0.82
DENND4A-206ENST00000564674 PKHD1P08F94 4074 aa9.94□□□□□ -0.82
DENND4A-206ENST00000564674 A8MUU9 505 aa9.91□□□□□ -0.82
DENND4A-206ENST00000564674 PKD1P98161 4303 aa9.9□□□□□ -0.82
DENND4A-206ENST00000564674 FAT1Q14517 4588 aa9.9□□□□□ -0.82
DENND4A-206ENST00000564674 H1FX-AS1Q4G0G2 97 aa9.88□□□□□ -0.83
DENND4A-206ENST00000564674 A0A0D9SG42 100 aa9.84□□□□□ -0.83
DENND4A-206ENST00000564674 KRTAP25-1Q3LHN0 102 aa9.82□□□□□ -0.84
DENND4A-206ENST00000564674 COX6B2Q6YFQ2 88 aa9.77□□□□□ -0.84
DENND4A-206ENST00000564674 KMT2CQ8NEZ4 4911 aaKnown RBP9.75□□□□□ -0.85
DENND4A-206ENST00000564674 K7ERS5 55 aa9.75□□□□□ -0.85
DENND4A-206ENST00000564674 C20orf166-AS1Q96NR2 134 aa9.74□□□□□ -0.85
DENND4A-206ENST00000564674 ROMO1P60602 79 aa9.66□□□□□ -0.86
DENND4A-206ENST00000564674 DYNC1H1Q14204 4646 aaKnown RBP9.65□□□□□ -0.86
DENND4A-206ENST00000564674 MYCBP2O75592 4640 aa9.63□□□□□ -0.87
DENND4A-206ENST00000564674 SACSQ9NZJ4 4579 aa9.6□□□□□ -0.87
DENND4A-206ENST00000564674 RPS29P62273 56 aaKnown RBP9.59□□□□□ -0.87
DENND4A-206ENST00000564674 KRTAP13-4Q3LI77 160 aa9.58□□□□□ -0.88
DENND4A-206ENST00000564674 C10orf95Q9H7T3 257 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms