RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 CIRBP-AS1Q8TBR5 109 aa10.89□□□□□ -0.67
GDE1-203ENST00000564172 A0A087X002 238 aa10.88□□□□□ -0.67
GDE1-203ENST00000564172 A0A1B0GVY2 172 aa10.87□□□□□ -0.67
GDE1-203ENST00000564172 H0Y9J4 135 aa10.86□□□□□ -0.67
GDE1-203ENST00000564172 LINC00313P59037 77 aa10.86□□□□□ -0.67
GDE1-203ENST00000564172 LINC01558Q9Y6Z2 57 aa10.85□□□□□ -0.67
GDE1-203ENST00000564172 PSORS1C2Q9UIG4 136 aa10.85□□□□□ -0.67
GDE1-203ENST00000564172 PLA2G1BP04054 148 aaKnown RBP10.83□□□□□ -0.68
GDE1-203ENST00000564172 DEFB105AQ8NG35 78 aa10.83□□□□□ -0.68
GDE1-203ENST00000564172 CASC2Q6XLA1 102 aa10.82□□□□□ -0.68
GDE1-203ENST00000564172 KRTAP13-1Q8IUC0 172 aa10.82□□□□□ -0.68
GDE1-203ENST00000564172 Q8N377 158 aa10.82□□□□□ -0.68
GDE1-203ENST00000564172 IGLV5-48A0A075B6I7 105 aa10.81□□□□□ -0.68
GDE1-203ENST00000564172 PKHD1P08F94 4074 aa10.81□□□□□ -0.68
GDE1-203ENST00000564172 DSCR10P59022 87 aa10.8□□□□□ -0.68
GDE1-203ENST00000564172 C1orf137Q5JT78 98 aa10.79□□□□□ -0.68
GDE1-203ENST00000564172 LRP1BQ9NZR2 4599 aa10.78□□□□□ -0.68
GDE1-203ENST00000564172 COA5Q86WW8 74 aa10.76□□□□□ -0.69
GDE1-203ENST00000564172 DYNC1H1Q14204 4646 aaKnown RBP10.73□□□□□ -0.69
GDE1-203ENST00000564172 K7EQZ3 153 aa10.73□□□□□ -0.69
GDE1-203ENST00000564172 ZNF861PO60384 105 aa10.73□□□□□ -0.69
GDE1-203ENST00000564172 SRRM2Q9UQ35 2752 aaKnown RBP10.72□□□□□ -0.69
GDE1-203ENST00000564172 RYR3Q15413 4870 aa10.71□□□□□ -0.69
GDE1-203ENST00000564172 SPRR4Q96PI1 79 aa10.71□□□□□ -0.69
GDE1-203ENST00000564172 IGLV7-43P04211 117 aa10.7□□□□□ -0.7
GDE1-203ENST00000564172 PRAC1Q96KF2 57 aa10.7□□□□□ -0.7
GDE1-203ENST00000564172 IGLV7-46A0A075B6I9 117 aa10.69□□□□□ -0.7
GDE1-203ENST00000564172 A0A1W2PNM2 257 aa10.69□□□□□ -0.7
GDE1-203ENST00000564172 SPRR1BP22528 89 aa10.68□□□□□ -0.7
GDE1-203ENST00000564172 Q8NBF4 154 aa10.68□□□□□ -0.7
GDE1-203ENST00000564172 SPINK7P58062 85 aa10.67□□□□□ -0.7
GDE1-203ENST00000564172 H0Y9P7 68 aa10.65□□□□□ -0.7
GDE1-203ENST00000564172 ZNF706Q9Y5V0 76 aaPredicted RBP10.61□□□□□ -0.71
GDE1-203ENST00000564172 LINC00483Q53H64 154 aa10.6□□□□□ -0.71
GDE1-203ENST00000564172 APOBP04114 4563 aaKnown RBP10.59□□□□□ -0.71
GDE1-203ENST00000564172 KRTAP29-1A8MX34 341 aaPredicted RBP10.59□□□□□ -0.71
GDE1-203ENST00000564172 SPAG11AQ6PDA7 123 aa10.59□□□□□ -0.71
GDE1-203ENST00000564172 VPS13BQ7Z7G8 4022 aa10.58□□□□□ -0.72
GDE1-203ENST00000564172 IGLV8-61A0A075B6I0 122 aa10.58□□□□□ -0.72
GDE1-203ENST00000564172 SMR3BP02814 79 aaPredicted RBP10.57□□□□□ -0.72
GDE1-203ENST00000564172 ADM2Q7Z4H4 148 aa10.56□□□□□ -0.72
GDE1-203ENST00000564172 ANAPC11Q9NYG5 84 aa10.55□□□□□ -0.72
GDE1-203ENST00000564172 RPL37AP61513 92 aaKnown RBP10.54□□□□□ -0.72
GDE1-203ENST00000564172 IGFL1Q6UW32 110 aa10.54□□□□□ -0.72
GDE1-203ENST00000564172 A0A0G2JQZ4 141 aa10.53□□□□□ -0.72
GDE1-203ENST00000564172 WFDC13Q8IUB5 93 aa10.53□□□□□ -0.72
GDE1-203ENST00000564172 RETNLBQ9BQ08 111 aa10.51□□□□□ -0.73
GDE1-203ENST00000564172 IGLV9-49A0A0B4J1Y8 123 aa10.5□□□□□ -0.73
GDE1-203ENST00000564172 FAT1Q14517 4588 aa10.49□□□□□ -0.73
GDE1-203ENST00000564172 DEFB116Q30KQ4 102 aa10.46□□□□□ -0.73
GDE1-203ENST00000564172 KRTAP10-4P60372 401 aaPredicted RBP10.45□□□□□ -0.74
GDE1-203ENST00000564172 SPINK6Q6UWN8 80 aa10.44□□□□□ -0.74
GDE1-203ENST00000564172 CDK2AP2O75956 126 aa10.43□□□□□ -0.74
GDE1-203ENST00000564172 KRTAP1-4P0C5Y4 121 aa10.42□□□□□ -0.74
GDE1-203ENST00000564172 SPATA8Q6RVD6 105 aa10.38□□□□□ -0.75
GDE1-203ENST00000564172 HRES1P13985 223 aa10.38□□□□□ -0.75
GDE1-203ENST00000564172 A0A087WSZ3 146 aa10.37□□□□□ -0.75
GDE1-203ENST00000564172 HSPG2P98160 4391 aa10.36□□□□□ -0.75
GDE1-203ENST00000564172 KRTAP13-2Q52LG2 175 aa10.36□□□□□ -0.75
GDE1-203ENST00000564172 SSBP3-AS1Q7Z2R9 100 aa10.36□□□□□ -0.75
GDE1-203ENST00000564172 FAM229AH3BQW9 127 aa10.35□□□□□ -0.75
GDE1-203ENST00000564172 CSAG1Q6PB30 78 aa10.34□□□□□ -0.75
GDE1-203ENST00000564172 EPPK1P58107 5090 aaKnown RBP10.32□□□□□ -0.76
GDE1-203ENST00000564172 TP53AIP1Q9HCN2 124 aa10.31□□□□□ -0.76
GDE1-203ENST00000564172 RYR1P21817 5038 aa10.3□□□□□ -0.76
GDE1-203ENST00000564172 IGHV6-1A0A0B4J1U7 121 aa10.29□□□□□ -0.76
GDE1-203ENST00000564172 A8MWP4 228 aa10.29□□□□□ -0.76
GDE1-203ENST00000564172 Q5VSD8 79 aa10.29□□□□□ -0.76
GDE1-203ENST00000564172 PCOTHQ58A44 107 aa10.27□□□□□ -0.76
GDE1-203ENST00000564172 KRTAP17-1Q9BYP8 105 aa10.26□□□□□ -0.77
GDE1-203ENST00000564172 KIAA1109Q2LD37 5005 aa10.25□□□□□ -0.77
GDE1-203ENST00000564172 TYMSOSQ8TAI1 123 aa10.25□□□□□ -0.77
GDE1-203ENST00000564172 LINC00472Q9H8W2 130 aa10.23□□□□□ -0.77
GDE1-203ENST00000564172 ROMO1P60602 79 aa10.22□□□□□ -0.77
GDE1-203ENST00000564172 Q8N1X5 172 aa10.19□□□□□ -0.78
GDE1-203ENST00000564172 MMP24-AS1A0A0U1RRL7 71 aa10.18□□□□□ -0.78
GDE1-203ENST00000564172 Q96NJ1 140 aa10.18□□□□□ -0.78
GDE1-203ENST00000564172 MIR22HGQ0VDD5 57 aa10.17□□□□□ -0.78
GDE1-203ENST00000564172 UQCR11O14957 56 aa10.15□□□□□ -0.78
GDE1-203ENST00000564172 PKHD1L1Q86WI1 4243 aa10.15□□□□□ -0.79
GDE1-203ENST00000564172 A0A1B0GU69 56 aa10.12□□□□□ -0.79
GDE1-203ENST00000564172 NOTCH2NLQ7Z3S9 236 aa10.12□□□□□ -0.79
GDE1-203ENST00000564172 LINC00304Q8N9R0 145 aa10.12□□□□□ -0.79
GDE1-203ENST00000564172 SPINK1P00995 79 aa10.11□□□□□ -0.79
GDE1-203ENST00000564172 ACYP2P14621 99 aa10.1□□□□□ -0.79
GDE1-203ENST00000564172 LRP1Q07954 4544 aaKnown RBP10.07□□□□□ -0.8
GDE1-203ENST00000564172 RPS29P62273 56 aaKnown RBP10.05□□□□□ -0.8
GDE1-203ENST00000564172 FLG2Q5D862 2391 aaPredicted RBP10.04□□□□□ -0.8
GDE1-203ENST00000564172 KRTAP25-1Q3LHN0 102 aa10.03□□□□□ -0.8
GDE1-203ENST00000564172 KRTAP10-8P60410 259 aa10.03□□□□□ -0.8
GDE1-203ENST00000564172 KRTAP4-5Q9BYR2 181 aa9.99□□□□□ -0.81
GDE1-203ENST00000564172 A0A0A0MQY5 61 aa9.98□□□□□ -0.81
GDE1-203ENST00000564172 A0A1B0GVX0 72 aa9.98□□□□□ -0.81
GDE1-203ENST00000564172 FAT3Q8TDW7 4589 aa9.98□□□□□ -0.81
GDE1-203ENST00000564172 TNXBP22105 4242 aa9.98□□□□□ -0.81
GDE1-203ENST00000564172 DMAC1Q96GE9 116 aa9.95□□□□□ -0.82
GDE1-203ENST00000564172 C8orf17Q9NRJ1 99 aa9.94□□□□□ -0.82
GDE1-203ENST00000564172 MYCBP2O75592 4640 aa9.94□□□□□ -0.82
GDE1-203ENST00000564172 BIRC6Q9NR09 4857 aa9.93□□□□□ -0.82
GDE1-203ENST00000564172 MT1HL1P0DM35 61 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms