RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 NOTCH2NLQ7Z3S9 236 aa7.73□□□□□ -1.17
CCDC187-201ENST00000563590 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.73□□□□□ -1.17
CCDC187-201ENST00000563590 C14orf177Q52M58 125 aa7.72□□□□□ -1.17
CCDC187-201ENST00000563590 ACYP2P14621 99 aa7.72□□□□□ -1.17
CCDC187-201ENST00000563590 APLNQ9ULZ1 77 aa7.72□□□□□ -1.17
CCDC187-201ENST00000563590 H3BS24 57 aa7.7□□□□□ -1.18
CCDC187-201ENST00000563590 IGLV5-52A0A0A0MRZ9 124 aa7.7□□□□□ -1.18
CCDC187-201ENST00000563590 DMBT1Q9UGM3 2413 aaPredicted RBP7.69□□□□□ -1.18
CCDC187-201ENST00000563590 CMYA5Q8N3K9 4069 aa7.69□□□□□ -1.18
CCDC187-201ENST00000563590 SPRR1BP22528 89 aa7.68□□□□□ -1.18
CCDC187-201ENST00000563590 IGKV2D-30A0A075B6S6 120 aa7.67□□□□□ -1.18
CCDC187-201ENST00000563590 IGKV2-30P06310 120 aa7.67□□□□□ -1.18
CCDC187-201ENST00000563590 LINC01554Q52M75 96 aa7.66□□□□□ -1.18
CCDC187-201ENST00000563590 RTL8CO15255 209 aa7.66□□□□□ -1.18
CCDC187-201ENST00000563590 MIR22HGQ0VDD5 57 aa7.65□□□□□ -1.19
CCDC187-201ENST00000563590 Q5W150 140 aa7.64□□□□□ -1.19
CCDC187-201ENST00000563590 FLG2Q5D862 2391 aaPredicted RBP7.63□□□□□ -1.19
CCDC187-201ENST00000563590 Q96NJ1 140 aa7.61□□□□□ -1.19
CCDC187-201ENST00000563590 PSORS1C2Q9UIG4 136 aa7.61□□□□□ -1.19
CCDC187-201ENST00000563590 C1orf134Q5TEV5 83 aa7.61□□□□□ -1.19
CCDC187-201ENST00000563590 CSAG1Q6PB30 78 aa7.61□□□□□ -1.19
CCDC187-201ENST00000563590 Q6ZR54 194 aa7.6□□□□□ -1.19
CCDC187-201ENST00000563590 LYSTQ99698 3801 aa7.6□□□□□ -1.19
CCDC187-201ENST00000563590 UQCR11O14957 56 aa7.6□□□□□ -1.19
CCDC187-201ENST00000563590 WWC2-AS2Q96NR7 200 aa7.59□□□□□ -1.19
CCDC187-201ENST00000563590 A0A087WTM6 91 aa7.58□□□□□ -1.2
CCDC187-201ENST00000563590 ZNF706Q9Y5V0 76 aaPredicted RBP7.58□□□□□ -1.2
CCDC187-201ENST00000563590 MEGF8Q7Z7M0 2845 aa7.58□□□□□ -1.2
CCDC187-201ENST00000563590 SPACA4Q8TDM5 124 aa7.58□□□□□ -1.2
CCDC187-201ENST00000563590 DNAH3Q8TD57 4116 aa7.58□□□□□ -1.2
CCDC187-201ENST00000563590 ASB16-AS1Q495Z4 193 aa7.57□□□□□ -1.2
CCDC187-201ENST00000563590 HUWE1Q7Z6Z7 4374 aaKnown RBP7.57□□□□□ -1.2
CCDC187-201ENST00000563590 DNAH9Q9NYC9 4486 aa7.57□□□□□ -1.2
CCDC187-201ENST00000563590 PLAC8Q9NZF1 115 aa7.57□□□□□ -1.2
CCDC187-201ENST00000563590 SMR3BP02814 79 aaPredicted RBP7.55□□□□□ -1.2
CCDC187-201ENST00000563590 KRTAP13-1Q8IUC0 172 aa7.54□□□□□ -1.2
CCDC187-201ENST00000563590 DNHD1Q96M86 4753 aa7.5□□□□□ -1.21
CCDC187-201ENST00000563590 PLA2G1BP04054 148 aaKnown RBP7.47□□□□□ -1.21
CCDC187-201ENST00000563590 Q8N1X5 172 aa7.47□□□□□ -1.21
CCDC187-201ENST00000563590 CRIPTQ9P021 101 aa7.47□□□□□ -1.21
CCDC187-201ENST00000563590 FAM229AH3BQW9 127 aa7.46□□□□□ -1.21
CCDC187-201ENST00000563590 ZNF861PO60384 105 aa7.44□□□□□ -1.22
CCDC187-201ENST00000563590 KRTAP10-2P60368 255 aa7.44□□□□□ -1.22
CCDC187-201ENST00000563590 LINC00483Q53H64 154 aa7.43□□□□□ -1.22
CCDC187-201ENST00000563590 DMAC1Q96GE9 116 aa7.42□□□□□ -1.22
CCDC187-201ENST00000563590 SPATA8Q6RVD6 105 aa7.41□□□□□ -1.22
CCDC187-201ENST00000563590 DNAH7Q8WXX0 4024 aa7.39□□□□□ -1.23
CCDC187-201ENST00000563590 KRTAP13-3Q3SY46 172 aa7.37□□□□□ -1.23
CCDC187-201ENST00000563590 IGLV7-43P04211 117 aa7.36□□□□□ -1.23
CCDC187-201ENST00000563590 Q6ZRN7 208 aaPredicted RBP7.36□□□□□ -1.23
CCDC187-201ENST00000563590 DNAH8Q96JB1 4490 aa7.36□□□□□ -1.23
CCDC187-201ENST00000563590 FRAS1Q86XX4 4008 aa7.35□□□□□ -1.23
CCDC187-201ENST00000563590 C9orf92A6NGG3 77 aa7.35□□□□□ -1.23
CCDC187-201ENST00000563590 PLECQ15149 4684 aaKnown RBP7.33□□□□□ -1.24
CCDC187-201ENST00000563590 PRKDCP78527 4128 aaKnown RBP7.33□□□□□ -1.24
CCDC187-201ENST00000563590 SSBP3-AS1Q7Z2R9 100 aa7.32□□□□□ -1.24
CCDC187-201ENST00000563590 KRTAP21-3Q3LHN1 58 aa7.32□□□□□ -1.24
CCDC187-201ENST00000563590 ALMS1Q8TCU4 4167 aa7.3□□□□□ -1.24
CCDC187-201ENST00000563590 TYMSOSQ8TAI1 123 aa7.3□□□□□ -1.24
CCDC187-201ENST00000563590 KRTAP10-1P60331 282 aa7.28□□□□□ -1.24
CCDC187-201ENST00000563590 K7ERS5 55 aa7.27□□□□□ -1.25
CCDC187-201ENST00000563590 DYNC2H1Q8NCM8 4307 aaKnown RBP7.23□□□□□ -1.25
CCDC187-201ENST00000563590 HECTD4Q9Y4D8 3996 aa7.2□□□□□ -1.26
CCDC187-201ENST00000563590 DNAH17Q9UFH2 4485 aa7.2□□□□□ -1.26
CCDC187-201ENST00000563590 A0A1B0GU33 70 aa7.19□□□□□ -1.26
CCDC187-201ENST00000563590 SPINT4Q6UDR6 99 aa7.19□□□□□ -1.26
CCDC187-201ENST00000563590 STARD9Q9P2P6 4700 aa7.18□□□□□ -1.26
CCDC187-201ENST00000563590 VPS13DQ5THJ4 4388 aa7.16□□□□□ -1.26
CCDC187-201ENST00000563590 KRTAP25-1Q3LHN0 102 aa7.15□□□□□ -1.26
CCDC187-201ENST00000563590 A0A0D9SG42 100 aa7.14□□□□□ -1.27
CCDC187-201ENST00000563590 ROMO1P60602 79 aa7.13□□□□□ -1.27
CCDC187-201ENST00000563590 LINC00304Q8N9R0 145 aa7.12□□□□□ -1.27
CCDC187-201ENST00000563590 Q6ZSA8 131 aa7.12□□□□□ -1.27
CCDC187-201ENST00000563590 DNAH2Q9P225 4427 aa7.12□□□□□ -1.27
CCDC187-201ENST00000563590 KRTAP13-2Q52LG2 175 aa7.11□□□□□ -1.27
CCDC187-201ENST00000563590 KMT2AQ03164 3969 aa7.11□□□□□ -1.27
CCDC187-201ENST00000563590 H0YAA0 97 aa7.1□□□□□ -1.27
CCDC187-201ENST00000563590 KRTAP16-1A8MUX0 517 aa7.1□□□□□ -1.27
CCDC187-201ENST00000563590 A8MUU9 505 aa7.08□□□□□ -1.28
CCDC187-201ENST00000563590 DNAH11Q96DT5 4516 aa7.05□□□□□ -1.28
CCDC187-201ENST00000563590 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
CCDC187-201ENST00000563590 DNAH6Q9C0G6 4158 aa7.02□□□□□ -1.29
CCDC187-201ENST00000563590 LRP1BQ9NZR2 4599 aa6.95□□□□□ -1.3
CCDC187-201ENST00000563590 DNAH5Q8TE73 4624 aa6.94□□□□□ -1.3
CCDC187-201ENST00000563590 KRTAP1-4P0C5Y4 121 aa6.92□□□□□ -1.3
CCDC187-201ENST00000563590 C10orf95Q9H7T3 257 aa6.91□□□□□ -1.3
CCDC187-201ENST00000563590 NDUFAF8A1L188 74 aa6.9□□□□□ -1.3
CCDC187-201ENST00000563590 COX6B2Q6YFQ2 88 aa6.9□□□□□ -1.3
CCDC187-201ENST00000563590 P0C880 135 aa6.87□□□□□ -1.31
CCDC187-201ENST00000563590 HYDINQ4G0P3 5121 aa6.86□□□□□ -1.31
CCDC187-201ENST00000563590 RPL37P61927 97 aaKnown RBP6.85□□□□□ -1.31
CCDC187-201ENST00000563590 FAT1Q14517 4588 aa6.84□□□□□ -1.31
CCDC187-201ENST00000563590 VPS13BQ7Z7G8 4022 aa6.83□□□□□ -1.32
CCDC187-201ENST00000563590 Q5VSD8 79 aa6.82□□□□□ -1.32
CCDC187-201ENST00000563590 KRTAP3-1Q9BYR8 98 aa6.79□□□□□ -1.32
CCDC187-201ENST00000563590 A0A1B0GVY2 172 aa6.77□□□□□ -1.32
CCDC187-201ENST00000563590 MYCBP2O75592 4640 aa6.75□□□□□ -1.33
CCDC187-201ENST00000563590 PKD1P98161 4303 aa6.72□□□□□ -1.33
CCDC187-201ENST00000563590 TPRXLQ17RH7 258 aa6.72□□□□□ -1.33
CCDC187-201ENST00000563590 KMT2CQ8NEZ4 4911 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms