RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 VCANP13611 3396 aa2.07□□□□□ -2.08
CHD9-206ENST00000562791 KALRNO60229 2985 aa2.07□□□□□ -2.08
CHD9-206ENST00000562791 DEFB124Q8NES8 71 aa2.07□□□□□ -2.08
CHD9-206ENST00000562791 FBN1P35555 2871 aaKnown RBP2.07□□□□□ -2.08
CHD9-206ENST00000562791 FAM208BQ5VWN6 2430 aa2.07□□□□□ -2.08
CHD9-206ENST00000562791 EPG5Q9HCE0 2579 aa2.06□□□□□ -2.08
CHD9-206ENST00000562791 UNC80Q8N2C7 3258 aa2.06□□□□□ -2.08
CHD9-206ENST00000562791 MAP1AP78559 2803 aaPredicted RBP2.06□□□□□ -2.08
CHD9-206ENST00000562791 OTOGLQ3ZCN5 2332 aa2.06□□□□□ -2.08
CHD9-206ENST00000562791 PIEZO1Q92508 2521 aa2.06□□□□□ -2.08
CHD9-206ENST00000562791 VPS13DQ5THJ4 4388 aa2.06□□□□□ -2.08
CHD9-206ENST00000562791 ITPR1Q14643 2758 aa2.05□□□□□ -2.08
CHD9-206ENST00000562791 DSPP15924 2871 aaKnown RBP2.05□□□□□ -2.08
CHD9-206ENST00000562791 BOD1L1Q8NFC6 3051 aa2.05□□□□□ -2.08
CHD9-206ENST00000562791 EP300Q09472 2414 aaPredicted RBP2.05□□□□□ -2.08
CHD9-206ENST00000562791 A0A096LNI7 61 aa2.05□□□□□ -2.08
CHD9-206ENST00000562791 KRTAP12-1P59990 96 aa2.05□□□□□ -2.08
CHD9-206ENST00000562791 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
CHD9-206ENST00000562791 KRTAP13-4Q3LI77 160 aa2.05□□□□□ -2.08
CHD9-206ENST00000562791 UBR5O95071 2799 aaPredicted RBP2.04□□□□□ -2.08
CHD9-206ENST00000562791 REV3LO60673 3130 aa2.04□□□□□ -2.08
CHD9-206ENST00000562791 AKAP13Q12802 2813 aa2.04□□□□□ -2.08
CHD9-206ENST00000562791 EYSQ5T1H1 3165 aa2.04□□□□□ -2.08
CHD9-206ENST00000562791 CSPG4Q6UVK1 2322 aa2.04□□□□□ -2.08
CHD9-206ENST00000562791 ABCA12Q86UK0 2595 aa2.04□□□□□ -2.08
CHD9-206ENST00000562791 TRIOO75962 3097 aa2.04□□□□□ -2.08
CHD9-206ENST00000562791 ITPR3Q14573 2671 aa2.04□□□□□ -2.08
CHD9-206ENST00000562791 XIRP2A4UGR9 3374 aa2.03□□□□□ -2.08
CHD9-206ENST00000562791 FRYQ5TBA9 3013 aa2.03□□□□□ -2.08
CHD9-206ENST00000562791 HECTD1Q9ULT8 2610 aa2.03□□□□□ -2.08
CHD9-206ENST00000562791 A0A0D9SG42 100 aa2.03□□□□□ -2.08
CHD9-206ENST00000562791 DNAH12Q6ZR08 3092 aa2.03□□□□□ -2.08
CHD9-206ENST00000562791 KIAA1109Q2LD37 5005 aa2.03□□□□□ -2.08
CHD9-206ENST00000562791 AKAP9Q99996 3911 aa2.02□□□□□ -2.09
CHD9-206ENST00000562791 HTTP42858 3142 aa2.02□□□□□ -2.09
CHD9-206ENST00000562791 ROS1P08922 2347 aa2.02□□□□□ -2.09
CHD9-206ENST00000562791 DMDP11532 3685 aa2.02□□□□□ -2.09
CHD9-206ENST00000562791 SPART-AS1P0CW21 52 aa2.02□□□□□ -2.09
CHD9-206ENST00000562791 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
CHD9-206ENST00000562791 Q5VSD8 79 aa2.02□□□□□ -2.09
CHD9-206ENST00000562791 SPINK6Q6UWN8 80 aa2.02□□□□□ -2.09
CHD9-206ENST00000562791 USP34Q70CQ2 3546 aa2.02□□□□□ -2.09
CHD9-206ENST00000562791 SETD2Q9BYW2 2564 aaPredicted RBP2.01□□□□□ -2.09
CHD9-206ENST00000562791 SPEGQ15772 3267 aa2□□□□□ -2.09
CHD9-206ENST00000562791 CRYBG3Q68DQ2 2970 aa2□□□□□ -2.09
CHD9-206ENST00000562791 DNHD1Q96M86 4753 aa2□□□□□ -2.09
CHD9-206ENST00000562791 DCHS1Q96JQ0 3298 aa2□□□□□ -2.09
CHD9-206ENST00000562791 NBPF19A0A087WUL8 3843 aa2□□□□□ -2.09
CHD9-206ENST00000562791 LRBAP50851 2863 aa1.99□□□□□ -2.09
CHD9-206ENST00000562791 VWFP04275 2813 aa1.99□□□□□ -2.09
CHD9-206ENST00000562791 ZNF292O60281 2723 aa1.98□□□□□ -2.09
CHD9-206ENST00000562791 CREBBPQ92793 2442 aa1.98□□□□□ -2.09
CHD9-206ENST00000562791 M0QZ58 72 aa1.98□□□□□ -2.09
CHD9-206ENST00000562791 GCN1Q92616 2671 aaKnown RBP1.98□□□□□ -2.09
CHD9-206ENST00000562791 COL12A1Q99715 3063 aa1.98□□□□□ -2.09
CHD9-206ENST00000562791 NCOR2Q9Y618 2525 aa1.97□□□□□ -2.09
CHD9-206ENST00000562791 CHD9Q3L8U1 2897 aa1.97□□□□□ -2.09
CHD9-206ENST00000562791 SPG11Q96JI7 2443 aa1.97□□□□□ -2.09
CHD9-206ENST00000562791 DNAH11Q96DT5 4516 aa1.97□□□□□ -2.09
CHD9-206ENST00000562791 HELZ2Q9BYK8 2649 aaKnown RBP1.97□□□□□ -2.09
CHD9-206ENST00000562791 C5orf42Q9H799 3197 aa1.96□□□□□ -2.1
CHD9-206ENST00000562791 RIF1Q5UIP0 2472 aaKnown RBP1.96□□□□□ -2.1
CHD9-206ENST00000562791 F8P00451 2351 aa1.96□□□□□ -2.1
CHD9-206ENST00000562791 CELSR3Q9NYQ7 3312 aa1.96□□□□□ -2.1
CHD9-206ENST00000562791 ANKHD1Q8IWZ3 2542 aaKnown RBP1.96□□□□□ -2.1
CHD9-206ENST00000562791 MUC6Q6W4X9 2439 aa1.96□□□□□ -2.1
CHD9-206ENST00000562791 JMJD1CQ15652 2540 aa1.95□□□□□ -2.1
CHD9-206ENST00000562791 DNAH14Q0VDD8 3507 aa1.95□□□□□ -2.1
CHD9-206ENST00000562791 NBASA2RRP1 2371 aa1.94□□□□□ -2.1
CHD9-206ENST00000562791 DMXL1Q9Y485 3027 aa1.94□□□□□ -2.1
CHD9-206ENST00000562791 NF1P21359 2839 aa1.94□□□□□ -2.1
CHD9-206ENST00000562791 HTN3P15516 51 aa1.94□□□□□ -2.1
CHD9-206ENST00000562791 PRRC2CQ9Y520 2896 aaKnown RBP1.94□□□□□ -2.1
CHD9-206ENST00000562791 CELSR1Q9NYQ6 3014 aa1.93□□□□□ -2.1
CHD9-206ENST00000562791 LAMA1P25391 3075 aa1.93□□□□□ -2.1
CHD9-206ENST00000562791 CCDC168Q8NDH2 2452 aa1.93□□□□□ -2.1
CHD9-206ENST00000562791 MUC2Q02817 5179 aa1.93□□□□□ -2.1
CHD9-206ENST00000562791 HIVEP3Q5T1R4 2406 aa1.93□□□□□ -2.1
CHD9-206ENST00000562791 FREM2Q5SZK8 3169 aa1.93□□□□□ -2.1
CHD9-206ENST00000562791 SRRM2Q9UQ35 2752 aaKnown RBP1.92□□□□□ -2.1
CHD9-206ENST00000562791 EP400Q96L91 3159 aa1.92□□□□□ -2.1
CHD9-206ENST00000562791 COL6A5A8TX70 2615 aa1.92□□□□□ -2.1
CHD9-206ENST00000562791 DNAH1Q9P2D7 4330 aa1.92□□□□□ -2.1
CHD9-206ENST00000562791 SPENQ96T58 3664 aaKnown RBP1.91□□□□□ -2.1
CHD9-206ENST00000562791 MUC3AQ02505 3323 aa1.91□□□□□ -2.1
CHD9-206ENST00000562791 DMXL2Q8TDJ6 3036 aa1.91□□□□□ -2.1
CHD9-206ENST00000562791 MYCBP2O75592 4640 aa1.9□□□□□ -2.1
CHD9-206ENST00000562791 RYR3Q15413 4870 aa1.9□□□□□ -2.11
CHD9-206ENST00000562791 MEGF8Q7Z7M0 2845 aa1.9□□□□□ -2.11
CHD9-206ENST00000562791 DEFB135Q30KP9 77 aa1.9□□□□□ -2.11
CHD9-206ENST00000562791 CRCT1Q9UGL9 99 aa1.9□□□□□ -2.11
CHD9-206ENST00000562791 ATMQ13315 3056 aa1.9□□□□□ -2.11
CHD9-206ENST00000562791 TACC2O95359 2948 aa1.9□□□□□ -2.11
CHD9-206ENST00000562791 TTC28Q96AY4 2481 aa1.9□□□□□ -2.11
CHD9-206ENST00000562791 RYR1P21817 5038 aa1.89□□□□□ -2.11
CHD9-206ENST00000562791 FRAS1Q86XX4 4008 aa1.88□□□□□ -2.11
CHD9-206ENST00000562791 WDFY3Q8IZQ1 3526 aa1.88□□□□□ -2.11
CHD9-206ENST00000562791 CSMD1Q96PZ7 3565 aa1.88□□□□□ -2.11
CHD9-206ENST00000562791 DEFB4AO15263 64 aa1.88□□□□□ -2.11
CHD9-206ENST00000562791 LAMA5O15230 3695 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms