RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 NBDYA0A0U1RRE5 68 aa8.51□□□□□ -1.05
GTF3C1-203ENST00000562609 RTL8CO15255 209 aa8.5□□□□□ -1.05
GTF3C1-203ENST00000562609 FBN3Q75N90 2809 aa8.5□□□□□ -1.05
GTF3C1-203ENST00000562609 NUPR2A6NF83 97 aa8.49□□□□□ -1.05
GTF3C1-203ENST00000562609 ASB16-AS1Q495Z4 193 aa8.48□□□□□ -1.05
GTF3C1-203ENST00000562609 VPS13DQ5THJ4 4388 aa8.48□□□□□ -1.05
GTF3C1-203ENST00000562609 C8orf17Q9NRJ1 99 aa8.47□□□□□ -1.05
GTF3C1-203ENST00000562609 KRTAP11-1Q8IUC1 163 aa8.46□□□□□ -1.05
GTF3C1-203ENST00000562609 DNAH2Q9P225 4427 aa8.46□□□□□ -1.06
GTF3C1-203ENST00000562609 PANO1I0J062 215 aa8.45□□□□□ -1.06
GTF3C1-203ENST00000562609 RETNLBQ9BQ08 111 aa8.44□□□□□ -1.06
GTF3C1-203ENST00000562609 CSAG1Q6PB30 78 aa8.44□□□□□ -1.06
GTF3C1-203ENST00000562609 Q6ZRN7 208 aaPredicted RBP8.44□□□□□ -1.06
GTF3C1-203ENST00000562609 IGHV6-1A0A0B4J1U7 121 aa8.43□□□□□ -1.06
GTF3C1-203ENST00000562609 SPRR1BP22528 89 aa8.42□□□□□ -1.06
GTF3C1-203ENST00000562609 Q96NJ1 140 aa8.42□□□□□ -1.06
GTF3C1-203ENST00000562609 SPATA8Q6RVD6 105 aa8.42□□□□□ -1.06
GTF3C1-203ENST00000562609 A0A1B0GU69 56 aa8.41□□□□□ -1.06
GTF3C1-203ENST00000562609 C14orf177Q52M58 125 aa8.41□□□□□ -1.06
GTF3C1-203ENST00000562609 ACYP2P14621 99 aa8.39□□□□□ -1.07
GTF3C1-203ENST00000562609 A0A087X002 238 aa8.39□□□□□ -1.07
GTF3C1-203ENST00000562609 MRPL34Q9BQ48 92 aaKnown RBP8.39□□□□□ -1.07
GTF3C1-203ENST00000562609 HECTD4Q9Y4D8 3996 aa8.38□□□□□ -1.07
GTF3C1-203ENST00000562609 MIR22HGQ0VDD5 57 aa8.37□□□□□ -1.07
GTF3C1-203ENST00000562609 A0A1B0GVX0 72 aa8.36□□□□□ -1.07
GTF3C1-203ENST00000562609 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
GTF3C1-203ENST00000562609 NOTCH2NLQ7Z3S9 236 aa8.35□□□□□ -1.07
GTF3C1-203ENST00000562609 A0A087WTM6 91 aa8.34□□□□□ -1.07
GTF3C1-203ENST00000562609 FRAS1Q86XX4 4008 aa8.34□□□□□ -1.07
GTF3C1-203ENST00000562609 CDK2AP2O75956 126 aa8.33□□□□□ -1.08
GTF3C1-203ENST00000562609 LY6G6CO95867 125 aa8.33□□□□□ -1.08
GTF3C1-203ENST00000562609 Q5W150 140 aa8.33□□□□□ -1.08
GTF3C1-203ENST00000562609 IGLV9-49A0A0B4J1Y8 123 aa8.32□□□□□ -1.08
GTF3C1-203ENST00000562609 UQCR11O14957 56 aa8.32□□□□□ -1.08
GTF3C1-203ENST00000562609 DNAH6Q9C0G6 4158 aa8.3□□□□□ -1.08
GTF3C1-203ENST00000562609 ALMS1Q8TCU4 4167 aa8.29□□□□□ -1.08
GTF3C1-203ENST00000562609 HYDINQ4G0P3 5121 aa8.28□□□□□ -1.08
GTF3C1-203ENST00000562609 DMAC1Q96GE9 116 aa8.27□□□□□ -1.09
GTF3C1-203ENST00000562609 DNAH17Q9UFH2 4485 aa8.27□□□□□ -1.09
GTF3C1-203ENST00000562609 DNAH8Q96JB1 4490 aa8.27□□□□□ -1.09
GTF3C1-203ENST00000562609 SPACA4Q8TDM5 124 aa8.26□□□□□ -1.09
GTF3C1-203ENST00000562609 C1orf134Q5TEV5 83 aa8.25□□□□□ -1.09
GTF3C1-203ENST00000562609 KRTAP13-3Q3SY46 172 aa8.25□□□□□ -1.09
GTF3C1-203ENST00000562609 ZNF861PO60384 105 aa8.23□□□□□ -1.09
GTF3C1-203ENST00000562609 DNAH11Q96DT5 4516 aa8.22□□□□□ -1.09
GTF3C1-203ENST00000562609 IGLV5-52A0A0A0MRZ9 124 aa8.21□□□□□ -1.09
GTF3C1-203ENST00000562609 ZNF706Q9Y5V0 76 aaPredicted RBP8.21□□□□□ -1.09
GTF3C1-203ENST00000562609 DNAH5Q8TE73 4624 aa8.19□□□□□ -1.1
GTF3C1-203ENST00000562609 KRTAP13-1Q8IUC0 172 aa8.18□□□□□ -1.1
GTF3C1-203ENST00000562609 ANAPC11Q9NYG5 84 aa8.18□□□□□ -1.1
GTF3C1-203ENST00000562609 PSORS1C2Q9UIG4 136 aa8.18□□□□□ -1.1
GTF3C1-203ENST00000562609 SPINK6Q6UWN8 80 aa8.17□□□□□ -1.1
GTF3C1-203ENST00000562609 KRTAP10-2P60368 255 aa8.16□□□□□ -1.1
GTF3C1-203ENST00000562609 ROMO1P60602 79 aa8.13□□□□□ -1.11
GTF3C1-203ENST00000562609 WWC2-AS2Q96NR7 200 aa8.13□□□□□ -1.11
GTF3C1-203ENST00000562609 FAT2Q9NYQ8 4349 aa8.1□□□□□ -1.11
GTF3C1-203ENST00000562609 LRP1BQ9NZR2 4599 aa8.09□□□□□ -1.11
GTF3C1-203ENST00000562609 PKD1P98161 4303 aa8.08□□□□□ -1.12
GTF3C1-203ENST00000562609 KRTAP25-1Q3LHN0 102 aa8.08□□□□□ -1.12
GTF3C1-203ENST00000562609 IGLV7-43P04211 117 aa8.08□□□□□ -1.12
GTF3C1-203ENST00000562609 LINC00483Q53H64 154 aa8.08□□□□□ -1.12
GTF3C1-203ENST00000562609 CIRBP-AS1Q8TBR5 109 aa8.07□□□□□ -1.12
GTF3C1-203ENST00000562609 IGKV2-30P06310 120 aa8.04□□□□□ -1.12
GTF3C1-203ENST00000562609 PKHD1P08F94 4074 aa8.04□□□□□ -1.12
GTF3C1-203ENST00000562609 FAM229AH3BQW9 127 aa8.03□□□□□ -1.12
GTF3C1-203ENST00000562609 KRTAP10-1P60331 282 aa8.02□□□□□ -1.13
GTF3C1-203ENST00000562609 SACSQ9NZJ4 4579 aa8.01□□□□□ -1.13
GTF3C1-203ENST00000562609 A8MUU9 505 aa8□□□□□ -1.13
GTF3C1-203ENST00000562609 KRTAP21-3Q3LHN1 58 aa7.99□□□□□ -1.13
GTF3C1-203ENST00000562609 SPINK1P00995 79 aa7.98□□□□□ -1.13
GTF3C1-203ENST00000562609 LINC00304Q8N9R0 145 aa7.98□□□□□ -1.13
GTF3C1-203ENST00000562609 VPS13BQ7Z7G8 4022 aa7.97□□□□□ -1.13
GTF3C1-203ENST00000562609 IGKV2D-30A0A075B6S6 120 aa7.96□□□□□ -1.14
GTF3C1-203ENST00000562609 P0C880 135 aa7.93□□□□□ -1.14
GTF3C1-203ENST00000562609 H0YAA0 97 aa7.93□□□□□ -1.14
GTF3C1-203ENST00000562609 FLG2Q5D862 2391 aaPredicted RBP7.93□□□□□ -1.14
GTF3C1-203ENST00000562609 CRIPTQ9P021 101 aa7.92□□□□□ -1.14
GTF3C1-203ENST00000562609 Q6ZSA8 131 aa7.91□□□□□ -1.14
GTF3C1-203ENST00000562609 KMT2CQ8NEZ4 4911 aaKnown RBP7.88□□□□□ -1.15
GTF3C1-203ENST00000562609 DYNC1H1Q14204 4646 aaKnown RBP7.84□□□□□ -1.16
GTF3C1-203ENST00000562609 FAT1Q14517 4588 aa7.83□□□□□ -1.16
GTF3C1-203ENST00000562609 KRTAP13-2Q52LG2 175 aa7.83□□□□□ -1.16
GTF3C1-203ENST00000562609 Q8N1X5 172 aa7.83□□□□□ -1.16
GTF3C1-203ENST00000562609 SMR3BP02814 79 aaPredicted RBP7.82□□□□□ -1.16
GTF3C1-203ENST00000562609 KRTAP16-1A8MUX0 517 aa7.81□□□□□ -1.16
GTF3C1-203ENST00000562609 SSBP3-AS1Q7Z2R9 100 aa7.79□□□□□ -1.16
GTF3C1-203ENST00000562609 TYMSOSQ8TAI1 123 aa7.79□□□□□ -1.16
GTF3C1-203ENST00000562609 A0A1B0GU33 70 aa7.78□□□□□ -1.16
GTF3C1-203ENST00000562609 KRTAP1-4P0C5Y4 121 aa7.77□□□□□ -1.17
GTF3C1-203ENST00000562609 RYR2Q92736 4967 aa7.77□□□□□ -1.17
GTF3C1-203ENST00000562609 H1FX-AS1Q4G0G2 97 aa7.71□□□□□ -1.17
GTF3C1-203ENST00000562609 APOBP04114 4563 aaKnown RBP7.71□□□□□ -1.18
GTF3C1-203ENST00000562609 SPINT4Q6UDR6 99 aa7.7□□□□□ -1.18
GTF3C1-203ENST00000562609 K7ERS5 55 aa7.69□□□□□ -1.18
GTF3C1-203ENST00000562609 A0A1B0GVY2 172 aa7.66□□□□□ -1.18
GTF3C1-203ENST00000562609 NDUFAF8A1L188 74 aa7.64□□□□□ -1.19
GTF3C1-203ENST00000562609 RYR3Q15413 4870 aa7.63□□□□□ -1.19
GTF3C1-203ENST00000562609 C20orf166-AS1Q96NR2 134 aa7.58□□□□□ -1.2
GTF3C1-203ENST00000562609 TPRXLQ17RH7 258 aa7.56□□□□□ -1.2
GTF3C1-203ENST00000562609 LRP1Q07954 4544 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 937.8 ms