RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 CD164Q04900 197 aa4.48□□□□□ -1.69
GINS3-204ENST00000561952 VPS25Q9BRG1 176 aa4.48□□□□□ -1.69
GINS3-204ENST00000561952 FAM240AA0A1B0GVK7 77 aa4.47□□□□□ -1.69
GINS3-204ENST00000561952 F8WEM9 126 aa4.47□□□□□ -1.69
GINS3-204ENST00000561952 C1orf195Q5TG92 126 aa4.47□□□□□ -1.69
GINS3-204ENST00000561952 ORMDL1Q9P0S3 153 aa4.47□□□□□ -1.69
GINS3-204ENST00000561952 hADV29S1A0JD25 119 aa4.46□□□□□ -1.7
GINS3-204ENST00000561952 TMEM256-PLSCR3K7ERE1 68 aa4.46□□□□□ -1.7
GINS3-204ENST00000561952 Q6ZQY7 126 aa4.46□□□□□ -1.7
GINS3-204ENST00000561952 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.7
GINS3-204ENST00000561952 ACYP1P07311 99 aa4.44□□□□□ -1.7
GINS3-204ENST00000561952 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.44□□□□□ -1.7
GINS3-204ENST00000561952 JMJD7-PLA2G4BH0Y9G9 81 aa4.43□□□□□ -1.7
GINS3-204ENST00000561952 Q5XG85 94 aa4.43□□□□□ -1.7
GINS3-204ENST00000561952 RPL37P61927 97 aaKnown RBP4.42□□□□□ -1.7
GINS3-204ENST00000561952 KRTAP19-2Q3LHN2 52 aa4.42□□□□□ -1.7
GINS3-204ENST00000561952 IGFL1Q6UW32 110 aa4.42□□□□□ -1.7
GINS3-204ENST00000561952 SIGMAR1Q99720 223 aa4.42□□□□□ -1.7
GINS3-204ENST00000561952 MT1HP80294 61 aa4.41□□□□□ -1.7
GINS3-204ENST00000561952 TRBV7-7A0A0K0K1E9 115 aa4.4□□□□□ -1.71
GINS3-204ENST00000561952 LOC110117498A0A087WWA1 95 aa4.39□□□□□ -1.71
GINS3-204ENST00000561952 CCKP06307 115 aa4.39□□□□□ -1.71
GINS3-204ENST00000561952 SCGB1A1P11684 91 aa4.39□□□□□ -1.71
GINS3-204ENST00000561952 C21orf62-AS1Q17RA5 79 aa4.39□□□□□ -1.71
GINS3-204ENST00000561952 Q6JHZ5 121 aa4.39□□□□□ -1.71
GINS3-204ENST00000561952 COX6B2Q6YFQ2 88 aa4.39□□□□□ -1.71
GINS3-204ENST00000561952 C14orf132Q9NPU4 83 aa4.39□□□□□ -1.71
GINS3-204ENST00000561952 PDE6GP18545 87 aa4.38□□□□□ -1.71
GINS3-204ENST00000561952 FLGP20930 4061 aaPredicted RBP4.38□□□□□ -1.71
GINS3-204ENST00000561952 M0R2T5 61 aa4.37□□□□□ -1.71
GINS3-204ENST00000561952 MT-ATP8P03928 68 aa4.37□□□□□ -1.71
GINS3-204ENST00000561952 NDUFV3P56181 108 aaKnown RBP4.37□□□□□ -1.71
GINS3-204ENST00000561952 RBM3P98179 157 aaKnown RBP4.37□□□□□ -1.71
GINS3-204ENST00000561952 Q6Q795 121 aa4.37□□□□□ -1.71
GINS3-204ENST00000561952 Q6ZQT0 140 aa4.37□□□□□ -1.71
GINS3-204ENST00000561952 TRBV7-4A0A0J9YYF1 115 aa4.36□□□□□ -1.71
GINS3-204ENST00000561952 LINC00643Q86TS7 51 aa4.36□□□□□ -1.71
GINS3-204ENST00000561952 IMUPQ9GZP8 106 aa4.35□□□□□ -1.71
GINS3-204ENST00000561952 A0A1B0GV72 72 aa4.34□□□□□ -1.71
GINS3-204ENST00000561952 DSCR8Q96T75 97 aa4.34□□□□□ -1.71
GINS3-204ENST00000561952 LINC00846Q9NV44 126 aa4.34□□□□□ -1.71
GINS3-204ENST00000561952 PCP4P48539 62 aa4.33□□□□□ -1.72
GINS3-204ENST00000561952 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
GINS3-204ENST00000561952 ATP11AUNQ6ZP68 121 aa4.33□□□□□ -1.72
GINS3-204ENST00000561952 Q96NJ1 140 aa4.33□□□□□ -1.72
GINS3-204ENST00000561952 A0A087WSZ3 146 aa4.32□□□□□ -1.72
GINS3-204ENST00000561952 A0A1B0GW54 56 aa4.32□□□□□ -1.72
GINS3-204ENST00000561952 CRCT1Q9UGL9 99 aa4.32□□□□□ -1.72
GINS3-204ENST00000561952 Q75L30 129 aa4.31□□□□□ -1.72
GINS3-204ENST00000561952 SS18L2Q9UHA2 77 aa4.31□□□□□ -1.72
GINS3-204ENST00000561952 FSIP2Q5CZC0 6907 aa4.3□□□□□ -1.72
GINS3-204ENST00000561952 ATP5EP2Q5VTU8 51 aa4.3□□□□□ -1.72
GINS3-204ENST00000561952 DSCR10P59022 87 aa4.29□□□□□ -1.72
GINS3-204ENST00000561952 UBL5Q9BZL1 73 aa4.29□□□□□ -1.72
GINS3-204ENST00000561952 Q6ZVQ6 151 aa4.27□□□□□ -1.73
GINS3-204ENST00000561952 A0A1W2PNM2 257 aa4.26□□□□□ -1.73
GINS3-204ENST00000561952 CXCL6P80162 114 aa4.26□□□□□ -1.73
GINS3-204ENST00000561952 A8MUU9 505 aa4.25□□□□□ -1.73
GINS3-204ENST00000561952 HIST1H4AP62805 103 aaKnown RBP4.25□□□□□ -1.73
GINS3-204ENST00000561952 DEFB116Q30KQ4 102 aa4.25□□□□□ -1.73
GINS3-204ENST00000561952 C20orf166-AS1Q96NR2 134 aa4.25□□□□□ -1.73
GINS3-204ENST00000561952 IGKV3D-7A0A0C4DH55 119 aa4.24□□□□□ -1.73
GINS3-204ENST00000561952 IGKV4-1P06312 121 aa4.24□□□□□ -1.73
GINS3-204ENST00000561952 FAM236AA0A1B0GUQ0 79 aa4.22□□□□□ -1.73
GINS3-204ENST00000561952 FAM236BA0A1B0GV22 79 aa4.22□□□□□ -1.73
GINS3-204ENST00000561952 IGHV6-1A0A0B4J1U7 121 aa4.21□□□□□ -1.74
GINS3-204ENST00000561952 FAM236DA0A1B0GTK5 79 aa4.21□□□□□ -1.74
GINS3-204ENST00000561952 FAM236CP0DP71 79 aa4.21□□□□□ -1.74
GINS3-204ENST00000561952 LINC00313P59037 77 aa4.21□□□□□ -1.74
GINS3-204ENST00000561952 NREPQ16612 68 aa4.21□□□□□ -1.74
GINS3-204ENST00000561952 NOTCH2NLQ7Z3S9 236 aa4.21□□□□□ -1.74
GINS3-204ENST00000561952 ANAPC13Q9BS18 74 aa4.21□□□□□ -1.74
GINS3-204ENST00000561952 KRTAP16-1A8MUX0 517 aa4.19□□□□□ -1.74
GINS3-204ENST00000561952 ATOX1O00244 68 aa4.19□□□□□ -1.74
GINS3-204ENST00000561952 A0A087WVE0 104 aa4.18□□□□□ -1.74
GINS3-204ENST00000561952 BPY2O14599 106 aa4.17□□□□□ -1.74
GINS3-204ENST00000561952 LINC00472Q9H8W2 130 aa4.17□□□□□ -1.74
GINS3-204ENST00000561952 A0A1B0GVX0 72 aa4.14□□□□□ -1.75
GINS3-204ENST00000561952 UQCRQO14949 82 aa4.14□□□□□ -1.75
GINS3-204ENST00000561952 HRES1P13985 223 aa4.14□□□□□ -1.75
GINS3-204ENST00000561952 COX7CP15954 63 aa4.14□□□□□ -1.75
GINS3-204ENST00000561952 SMIM20Q8N5G0 67 aa4.14□□□□□ -1.75
GINS3-204ENST00000561952 SERP2Q8N6R1 65 aa4.14□□□□□ -1.75
GINS3-204ENST00000561952 RBM12B-AS1Q9P1G2 102 aa4.14□□□□□ -1.75
GINS3-204ENST00000561952 TRAV7A0A075B6U4 112 aa4.12□□□□□ -1.75
GINS3-204ENST00000561952 C8orf87E5RJ46 101 aa4.12□□□□□ -1.75
GINS3-204ENST00000561952 CCDC179H3BU77 68 aa4.12□□□□□ -1.75
GINS3-204ENST00000561952 J3KT08 172 aa4.12□□□□□ -1.75
GINS3-204ENST00000561952 Q8N9L7 120 aa4.12□□□□□ -1.75
GINS3-204ENST00000561952 K7EQZ3 153 aa4.1□□□□□ -1.75
GINS3-204ENST00000561952 MT2AP02795 61 aa4.1□□□□□ -1.75
GINS3-204ENST00000561952 USH2AO75445 5202 aa4.09□□□□□ -1.75
GINS3-204ENST00000561952 A8MWP4 228 aa4.09□□□□□ -1.75
GINS3-204ENST00000561952 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
GINS3-204ENST00000561952 MPLKIPQ8TAP9 179 aa4.09□□□□□ -1.75
GINS3-204ENST00000561952 ZCCHC13Q8WW36 166 aaKnown RBP4.09□□□□□ -1.75
GINS3-204ENST00000561952 NDUFB1O75438 58 aa4.08□□□□□ -1.76
GINS3-204ENST00000561952 MT1FP04733 61 aa4.08□□□□□ -1.76
GINS3-204ENST00000561952 PRR15Q8IV56 129 aa4.08□□□□□ -1.76
GINS3-204ENST00000561952 OCR1Q9BZK8 76 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms