RNA–Protein interactions for RNA: ENST00000561610.1

PPP4C-202, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4C, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-202ENST00000561610 SS18L2Q9UHA2 77 aa10.41□□□□□ -0.74
PPP4C-202ENST00000561610 COX7CP15954 63 aa10.4□□□□□ -0.74
PPP4C-202ENST00000561610 RBM3P98179 157 aaKnown RBP10.4□□□□□ -0.74
PPP4C-202ENST00000561610 LINC00846Q9NV44 126 aa10.4□□□□□ -0.74
PPP4C-202ENST00000561610 A0A087WSZ3 146 aa10.39□□□□□ -0.75
PPP4C-202ENST00000561610 KRTAP13-3Q3SY46 172 aa10.39□□□□□ -0.75
PPP4C-202ENST00000561610 DSCR8Q96T75 97 aa10.39□□□□□ -0.75
PPP4C-202ENST00000561610 A0A1W2PNM2 257 aa10.37□□□□□ -0.75
PPP4C-202ENST00000561610 C9orf92A6NGG3 77 aa10.37□□□□□ -0.75
PPP4C-202ENST00000561610 ASB16-AS1Q495Z4 193 aa10.33□□□□□ -0.76
PPP4C-202ENST00000561610 LCE2AQ5TA79 106 aaPredicted RBP10.33□□□□□ -0.76
PPP4C-202ENST00000561610 SERP2Q8N6R1 65 aa10.33□□□□□ -0.76
PPP4C-202ENST00000561610 Q6ZQT0 140 aa10.33□□□□□ -0.76
PPP4C-202ENST00000561610 IGKV3D-7A0A0C4DH55 119 aa10.32□□□□□ -0.76
PPP4C-202ENST00000561610 TRBV7-4A0A0J9YYF1 115 aa10.32□□□□□ -0.76
PPP4C-202ENST00000561610 SMIM20Q8N5G0 67 aa10.31□□□□□ -0.76
PPP4C-202ENST00000561610 CXCL6P80162 114 aa10.27□□□□□ -0.77
PPP4C-202ENST00000561610 TMEM258P61165 79 aa10.26□□□□□ -0.77
PPP4C-202ENST00000561610 XP32Q5T750 250 aa10.25□□□□□ -0.77
PPP4C-202ENST00000561610 A0A1B0GW54 56 aa10.22□□□□□ -0.77
PPP4C-202ENST00000561610 IGKV4-1P06312 121 aa10.2□□□□□ -0.78
PPP4C-202ENST00000561610 SEC61BP60468 96 aaKnown RBP10.2□□□□□ -0.78
PPP4C-202ENST00000561610 DEFB116Q30KQ4 102 aa10.2□□□□□ -0.78
PPP4C-202ENST00000561610 J3KT08 172 aa10.19□□□□□ -0.78
PPP4C-202ENST00000561610 SVIPQ8NHG7 77 aa10.19□□□□□ -0.78
PPP4C-202ENST00000561610 Q96NJ1 140 aa10.19□□□□□ -0.78
PPP4C-202ENST00000561610 RPS28P62857 69 aaKnown RBP10.18□□□□□ -0.78
PPP4C-202ENST00000561610 Q6ZVQ6 151 aa10.18□□□□□ -0.78
PPP4C-202ENST00000561610 FSIP2Q5CZC0 6907 aa10.18□□□□□ -0.78
PPP4C-202ENST00000561610 MUC17Q685J3 4493 aa10.18□□□□□ -0.78
PPP4C-202ENST00000561610 A0A087WVE0 104 aa10.17□□□□□ -0.78
PPP4C-202ENST00000561610 CRCT1Q9UGL9 99 aa10.17□□□□□ -0.78
PPP4C-202ENST00000561610 TRAV7A0A075B6U4 112 aa10.15□□□□□ -0.78
PPP4C-202ENST00000561610 LINC00472Q9H8W2 130 aa10.11□□□□□ -0.79
PPP4C-202ENST00000561610 DSCR10P59022 87 aa10.09□□□□□ -0.79
PPP4C-202ENST00000561610 PCOTHQ58A44 107 aa10.08□□□□□ -0.8
PPP4C-202ENST00000561610 IGHV6-1A0A0B4J1U7 121 aa10.07□□□□□ -0.8
PPP4C-202ENST00000561610 NDUFC1O43677 76 aa10.07□□□□□ -0.8
PPP4C-202ENST00000561610 RPL37P61927 97 aaKnown RBP10.07□□□□□ -0.8
PPP4C-202ENST00000561610 NREPQ16612 68 aa10.06□□□□□ -0.8
PPP4C-202ENST00000561610 LINC00313P59037 77 aa10.05□□□□□ -0.8
PPP4C-202ENST00000561610 ATP5EP56381 51 aaPredicted RBP10.03□□□□□ -0.8
PPP4C-202ENST00000561610 KLKP1Q107X0 134 aa10.03□□□□□ -0.8
PPP4C-202ENST00000561610 LCE2DQ5TA82 110 aaPredicted RBP10.03□□□□□ -0.8
PPP4C-202ENST00000561610 NDUFB1O75438 58 aa10.02□□□□□ -0.81
PPP4C-202ENST00000561610 A0A1B0GVX0 72 aa10□□□□□ -0.81
PPP4C-202ENST00000561610 ATP11AUNQ6ZP68 121 aa9.99□□□□□ -0.81
PPP4C-202ENST00000561610 C20orf197Q8N268 126 aa9.99□□□□□ -0.81
PPP4C-202ENST00000561610 FAM236DA0A1B0GTK5 79 aa9.98□□□□□ -0.81
PPP4C-202ENST00000561610 BPY2O14599 106 aa9.98□□□□□ -0.81
PPP4C-202ENST00000561610 FAM236CP0DP71 79 aa9.98□□□□□ -0.81
PPP4C-202ENST00000561610 Q75L30 129 aa9.98□□□□□ -0.81
PPP4C-202ENST00000561610 C8orf87E5RJ46 101 aa9.96□□□□□ -0.82
PPP4C-202ENST00000561610 NOTCH2NLQ7Z3S9 236 aa9.96□□□□□ -0.82
PPP4C-202ENST00000561610 KRTAP4-1Q9BYQ7 146 aa9.96□□□□□ -0.82
PPP4C-202ENST00000561610 A8MWP4 228 aa9.93□□□□□ -0.82
PPP4C-202ENST00000561610 C20orf166-AS1Q96NR2 134 aa9.92□□□□□ -0.82
PPP4C-202ENST00000561610 A8MUU9 505 aa9.91□□□□□ -0.82
PPP4C-202ENST00000561610 CYSTM1Q9H1C7 97 aa9.91□□□□□ -0.82
PPP4C-202ENST00000561610 SERP1Q9Y6X1 66 aa9.91□□□□□ -0.82
PPP4C-202ENST00000561610 H7BZZ5 65 aa9.89□□□□□ -0.83
PPP4C-202ENST00000561610 KRTAP16-1A8MUX0 517 aa9.88□□□□□ -0.83
PPP4C-202ENST00000561610 C8orf17Q9NRJ1 99 aa9.87□□□□□ -0.83
PPP4C-202ENST00000561610 PRR15Q8IV56 129 aa9.85□□□□□ -0.83
PPP4C-202ENST00000561610 TMEM254Q8TBM7 123 aa9.84□□□□□ -0.83
PPP4C-202ENST00000561610 K7EQZ3 153 aa9.82□□□□□ -0.84
PPP4C-202ENST00000561610 OCR1Q9BZK8 76 aa9.82□□□□□ -0.84
PPP4C-202ENST00000561610 C5orf47Q569G3 176 aa9.8□□□□□ -0.84
PPP4C-202ENST00000561610 SNURFQ9Y675 71 aa9.79□□□□□ -0.84
PPP4C-202ENST00000561610 Q8N9L7 120 aa9.78□□□□□ -0.84
PPP4C-202ENST00000561610 MMP24-AS1A0A0U1RRL7 71 aa9.76□□□□□ -0.85
PPP4C-202ENST00000561610 SMIM26A0A096LP01 95 aa9.75□□□□□ -0.85
PPP4C-202ENST00000561610 NDUFS5O43920 106 aa9.75□□□□□ -0.85
PPP4C-202ENST00000561610 hDV103S1A0JD37 113 aa9.74□□□□□ -0.85
PPP4C-202ENST00000561610 WFDC13Q8IUB5 93 aa9.73□□□□□ -0.85
PPP4C-202ENST00000561610 MRPL34Q9BQ48 92 aaKnown RBP9.73□□□□□ -0.85
PPP4C-202ENST00000561610 COX6B2Q6YFQ2 88 aa9.72□□□□□ -0.85
PPP4C-202ENST00000561610 HCG22E2RYF7 251 aa9.71□□□□□ -0.86
PPP4C-202ENST00000561610 Q8N9P0 234 aaPredicted RBP9.71□□□□□ -0.86
PPP4C-202ENST00000561610 ZCCHC13Q8WW36 166 aaKnown RBP9.7□□□□□ -0.86
PPP4C-202ENST00000561610 CASC2Q6XLA1 102 aa9.68□□□□□ -0.86
PPP4C-202ENST00000561610 KRTAP9-7A8MTY7 169 aa9.66□□□□□ -0.86
PPP4C-202ENST00000561610 H3BPC8 53 aa9.64□□□□□ -0.87
PPP4C-202ENST00000561610 MP68P56378 58 aa9.61□□□□□ -0.87
PPP4C-202ENST00000561610 KRTAP19-2Q3LHN2 52 aa9.59□□□□□ -0.87
PPP4C-202ENST00000561610 LCE2CQ5TA81 110 aa9.57□□□□□ -0.88
PPP4C-202ENST00000561610 SPINK7P58062 85 aa9.56□□□□□ -0.88
PPP4C-202ENST00000561610 C4orf26Q17RF5 130 aa9.55□□□□□ -0.88
PPP4C-202ENST00000561610 RBM12B-AS1Q9P1G2 102 aa9.54□□□□□ -0.88
PPP4C-202ENST00000561610 CYP4F30PQ9H0H9 118 aa9.53□□□□□ -0.88
PPP4C-202ENST00000561610 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.52□□□□□ -0.89
PPP4C-202ENST00000561610 M0R2T5 61 aa9.52□□□□□ -0.89
PPP4C-202ENST00000561610 HRES1P13985 223 aa9.5□□□□□ -0.89
PPP4C-202ENST00000561610 MT1HP80294 61 aa9.5□□□□□ -0.89
PPP4C-202ENST00000561610 SPANXA2-OT1Q8N9U9 137 aa9.49□□□□□ -0.89
PPP4C-202ENST00000561610 IGKV2D-30A0A075B6S6 120 aa9.47□□□□□ -0.89
PPP4C-202ENST00000561610 IGKV2-30P06310 120 aa9.47□□□□□ -0.89
PPP4C-202ENST00000561610 TRAV22A0A0B4J277 110 aa9.46□□□□□ -0.9
PPP4C-202ENST00000561610 Q5W150 140 aa9.46□□□□□ -0.9
PPP4C-202ENST00000561610 TP53AIP1Q9HCN2 124 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms