RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 FLG2Q5D862 2391 aaPredicted RBP9.67□□□□□ -0.86
AP4E1-205ENST00000561393 ACYP2P14621 99 aa9.66□□□□□ -0.86
AP4E1-205ENST00000561393 COA5Q86WW8 74 aa9.66□□□□□ -0.86
AP4E1-205ENST00000561393 FBN3Q75N90 2809 aa9.62□□□□□ -0.87
AP4E1-205ENST00000561393 KRTAP29-1A8MX34 341 aaPredicted RBP9.6□□□□□ -0.87
AP4E1-205ENST00000561393 FP248Q71RG6 208 aaPredicted RBP9.59□□□□□ -0.87
AP4E1-205ENST00000561393 NOTCH2NLQ7Z3S9 236 aa9.58□□□□□ -0.88
AP4E1-205ENST00000561393 A8MUN3 132 aa9.57□□□□□ -0.88
AP4E1-205ENST00000561393 PMAIP1Q13794 54 aa9.57□□□□□ -0.88
AP4E1-205ENST00000561393 SRRM2Q9UQ35 2752 aaKnown RBP9.57□□□□□ -0.88
AP4E1-205ENST00000561393 SPANXA2-OT1Q8N9U9 137 aa9.56□□□□□ -0.88
AP4E1-205ENST00000561393 Q8N9P0 234 aaPredicted RBP9.52□□□□□ -0.89
AP4E1-205ENST00000561393 ATP11AUNQ6ZP68 121 aa9.52□□□□□ -0.89
AP4E1-205ENST00000561393 KRTAP13-2Q52LG2 175 aa9.52□□□□□ -0.89
AP4E1-205ENST00000561393 MEGF8Q7Z7M0 2845 aa9.5□□□□□ -0.89
AP4E1-205ENST00000561393 CYP4F30PQ9H0H9 118 aa9.48□□□□□ -0.89
AP4E1-205ENST00000561393 A0A1B0GU69 56 aa9.48□□□□□ -0.89
AP4E1-205ENST00000561393 HUWE1Q7Z6Z7 4374 aaKnown RBP9.48□□□□□ -0.89
AP4E1-205ENST00000561393 IGLV7-46A0A075B6I9 117 aa9.47□□□□□ -0.89
AP4E1-205ENST00000561393 Q8N1X5 172 aa9.46□□□□□ -0.89
AP4E1-205ENST00000561393 Q6ZSA8 131 aa9.46□□□□□ -0.9
AP4E1-205ENST00000561393 HRES1P13985 223 aa9.45□□□□□ -0.9
AP4E1-205ENST00000561393 Q5VSD8 79 aa9.44□□□□□ -0.9
AP4E1-205ENST00000561393 Q5W150 140 aa9.43□□□□□ -0.9
AP4E1-205ENST00000561393 COL7A1Q02388 2944 aa9.43□□□□□ -0.9
AP4E1-205ENST00000561393 ZCCHC13Q8WW36 166 aaKnown RBP9.43□□□□□ -0.9
AP4E1-205ENST00000561393 CSMD3Q7Z407 3707 aa9.4□□□□□ -0.9
AP4E1-205ENST00000561393 J3QL48 77 aa9.38□□□□□ -0.91
AP4E1-205ENST00000561393 ASB16-AS1Q495Z4 193 aa9.33□□□□□ -0.92
AP4E1-205ENST00000561393 KRTAP1-4P0C5Y4 121 aa9.31□□□□□ -0.92
AP4E1-205ENST00000561393 Q1T7F1 81 aa9.29□□□□□ -0.92
AP4E1-205ENST00000561393 K7ERS5 55 aa9.26□□□□□ -0.93
AP4E1-205ENST00000561393 DNAH9Q9NYC9 4486 aa9.26□□□□□ -0.93
AP4E1-205ENST00000561393 SPINK7P58062 85 aa9.22□□□□□ -0.93
AP4E1-205ENST00000561393 RBM12B-AS1Q9P1G2 102 aa9.17□□□□□ -0.94
AP4E1-205ENST00000561393 UQCR11O14957 56 aa9.17□□□□□ -0.94
AP4E1-205ENST00000561393 RPS29P62273 56 aaKnown RBP9.14□□□□□ -0.95
AP4E1-205ENST00000561393 DMAC1Q96GE9 116 aa9.13□□□□□ -0.95
AP4E1-205ENST00000561393 PLECQ15149 4684 aaKnown RBP9.12□□□□□ -0.95
AP4E1-205ENST00000561393 LINC01558Q9Y6Z2 57 aa9.12□□□□□ -0.95
AP4E1-205ENST00000561393 A8MU10 97 aa9.11□□□□□ -0.95
AP4E1-205ENST00000561393 Q5VV11 94 aa9.1□□□□□ -0.95
AP4E1-205ENST00000561393 DNHD1Q96M86 4753 aa9.1□□□□□ -0.95
AP4E1-205ENST00000561393 MIR22HGQ0VDD5 57 aa9.09□□□□□ -0.95
AP4E1-205ENST00000561393 ANK2Q01484 3957 aa9.08□□□□□ -0.96
AP4E1-205ENST00000561393 KTN1-AS1Q86SY8 53 aa9.08□□□□□ -0.96
AP4E1-205ENST00000561393 Q75L30 129 aa9.05□□□□□ -0.96
AP4E1-205ENST00000561393 A0A1B0GVY2 172 aa9.04□□□□□ -0.96
AP4E1-205ENST00000561393 DNAH10Q8IVF4 4471 aa9.04□□□□□ -0.96
AP4E1-205ENST00000561393 H3BS24 57 aa9.02□□□□□ -0.97
AP4E1-205ENST00000561393 CDC42SE1Q9NRR8 79 aa9.02□□□□□ -0.97
AP4E1-205ENST00000561393 COX6B2Q6YFQ2 88 aa8.99□□□□□ -0.97
AP4E1-205ENST00000561393 PRKDCP78527 4128 aaKnown RBP8.96□□□□□ -0.97
AP4E1-205ENST00000561393 STARD9Q9P2P6 4700 aa8.94□□□□□ -0.98
AP4E1-205ENST00000561393 KRTAP16-1A8MUX0 517 aa8.93□□□□□ -0.98
AP4E1-205ENST00000561393 A8MUU9 505 aa8.9□□□□□ -0.98
AP4E1-205ENST00000561393 DNAH1Q9P2D7 4330 aa8.9□□□□□ -0.99
AP4E1-205ENST00000561393 A0A1B0GU33 70 aa8.89□□□□□ -0.99
AP4E1-205ENST00000561393 C20orf166-AS1Q96NR2 134 aa8.89□□□□□ -0.99
AP4E1-205ENST00000561393 A0A0D9SG42 100 aa8.88□□□□□ -0.99
AP4E1-205ENST00000561393 CMYA5Q8N3K9 4069 aa8.85□□□□□ -0.99
AP4E1-205ENST00000561393 S4R3F8 94 aa8.84□□□□□ -0.99
AP4E1-205ENST00000561393 DNAH3Q8TD57 4116 aa8.82□□□□□ -1
AP4E1-205ENST00000561393 DNAH11Q96DT5 4516 aa8.82□□□□□ -1
AP4E1-205ENST00000561393 VPS13DQ5THJ4 4388 aa8.82□□□□□ -1
AP4E1-205ENST00000561393 RPL37P61927 97 aaKnown RBP8.81□□□□□ -1
AP4E1-205ENST00000561393 LCA10Q71F78 164 aa8.8□□□□□ -1
AP4E1-205ENST00000561393 KRTAP13-3Q3SY46 172 aa8.79□□□□□ -1
AP4E1-205ENST00000561393 SEC61BP60468 96 aaKnown RBP8.79□□□□□ -1
AP4E1-205ENST00000561393 LINC01554Q52M75 96 aa8.78□□□□□ -1
AP4E1-205ENST00000561393 CSAG1Q6PB30 78 aa8.76□□□□□ -1.01
AP4E1-205ENST00000561393 PRAC1Q96KF2 57 aa8.75□□□□□ -1.01
AP4E1-205ENST00000561393 KRTAP10-8P60410 259 aa8.73□□□□□ -1.01
AP4E1-205ENST00000561393 XP32Q5T750 250 aa8.73□□□□□ -1.01
AP4E1-205ENST00000561393 LYSTQ99698 3801 aa8.73□□□□□ -1.01
AP4E1-205ENST00000561393 A6NN06 94 aa8.72□□□□□ -1.01
AP4E1-205ENST00000561393 SPINT4Q6UDR6 99 aa8.71□□□□□ -1.01
AP4E1-205ENST00000561393 KMT2AQ03164 3969 aa8.71□□□□□ -1.02
AP4E1-205ENST00000561393 DNAH5Q8TE73 4624 aa8.69□□□□□ -1.02
AP4E1-205ENST00000561393 SPATA8Q6RVD6 105 aa8.66□□□□□ -1.02
AP4E1-205ENST00000561393 DNAH17Q9UFH2 4485 aa8.64□□□□□ -1.03
AP4E1-205ENST00000561393 H1FX-AS1Q4G0G2 97 aa8.63□□□□□ -1.03
AP4E1-205ENST00000561393 KRTAP10-4P60372 401 aaPredicted RBP8.58□□□□□ -1.04
AP4E1-205ENST00000561393 ADM2Q7Z4H4 148 aa8.57□□□□□ -1.04
AP4E1-205ENST00000561393 DNAH7Q8WXX0 4024 aa8.56□□□□□ -1.04
AP4E1-205ENST00000561393 ALMS1Q8TCU4 4167 aa8.55□□□□□ -1.04
AP4E1-205ENST00000561393 DNAH2Q9P225 4427 aa8.55□□□□□ -1.04
AP4E1-205ENST00000561393 LRP1BQ9NZR2 4599 aa8.54□□□□□ -1.04
AP4E1-205ENST00000561393 FAT1Q14517 4588 aa8.53□□□□□ -1.04
AP4E1-205ENST00000561393 R4GN34 69 aa8.51□□□□□ -1.05
AP4E1-205ENST00000561393 M0R2T5 61 aa8.51□□□□□ -1.05
AP4E1-205ENST00000561393 TPRXLQ17RH7 258 aa8.5□□□□□ -1.05
AP4E1-205ENST00000561393 DYNC1H1Q14204 4646 aaKnown RBP8.48□□□□□ -1.05
AP4E1-205ENST00000561393 DYNC2H1Q8NCM8 4307 aaKnown RBP8.46□□□□□ -1.06
AP4E1-205ENST00000561393 DNAH8Q96JB1 4490 aa8.45□□□□□ -1.06
AP4E1-205ENST00000561393 CRIPTQ9P021 101 aa8.45□□□□□ -1.06
AP4E1-205ENST00000561393 M0QZ58 72 aa8.43□□□□□ -1.06
AP4E1-205ENST00000561393 MT1HL1P0DM35 61 aa8.38□□□□□ -1.07
AP4E1-205ENST00000561393 KRTAP3-1Q9BYR8 98 aa8.36□□□□□ -1.07
AP4E1-205ENST00000561393 CAMK2N1Q7Z7J9 78 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms