RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 KRTAP24-1Q3LI83 254 aa9.82□□□□□ -0.84
TPM1-228ENST00000560975 ADM2Q7Z4H4 148 aa9.82□□□□□ -0.84
TPM1-228ENST00000560975 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.79□□□□□ -0.84
TPM1-228ENST00000560975 WWC2-AS2Q96NR7 200 aa9.77□□□□□ -0.84
TPM1-228ENST00000560975 DNAH7Q8WXX0 4024 aa9.77□□□□□ -0.85
TPM1-228ENST00000560975 ACYP2P14621 99 aa9.77□□□□□ -0.85
TPM1-228ENST00000560975 C8orf87E5RJ46 101 aa9.75□□□□□ -0.85
TPM1-228ENST00000560975 LINC00483Q53H64 154 aa9.75□□□□□ -0.85
TPM1-228ENST00000560975 RETNLBQ9BQ08 111 aa9.75□□□□□ -0.85
TPM1-228ENST00000560975 ALMS1Q8TCU4 4167 aa9.74□□□□□ -0.85
TPM1-228ENST00000560975 FRAS1Q86XX4 4008 aa9.73□□□□□ -0.85
TPM1-228ENST00000560975 MGAM2Q2M2H8 2515 aa9.72□□□□□ -0.85
TPM1-228ENST00000560975 KRTAP13-3Q3SY46 172 aa9.72□□□□□ -0.85
TPM1-228ENST00000560975 A0A1B0GU69 56 aa9.7□□□□□ -0.86
TPM1-228ENST00000560975 APLNQ9ULZ1 77 aa9.7□□□□□ -0.86
TPM1-228ENST00000560975 ZNF706Q9Y5V0 76 aaPredicted RBP9.7□□□□□ -0.86
TPM1-228ENST00000560975 SPACA4Q8TDM5 124 aa9.69□□□□□ -0.86
TPM1-228ENST00000560975 PSORS1C2Q9UIG4 136 aa9.69□□□□□ -0.86
TPM1-228ENST00000560975 DNAH8Q96JB1 4490 aa9.69□□□□□ -0.86
TPM1-228ENST00000560975 CIRBP-AS1Q8TBR5 109 aa9.66□□□□□ -0.86
TPM1-228ENST00000560975 DMAC1Q96GE9 116 aa9.65□□□□□ -0.87
TPM1-228ENST00000560975 NBDYA0A0U1RRE5 68 aa9.64□□□□□ -0.87
TPM1-228ENST00000560975 PLA2G1BP04054 148 aaKnown RBP9.64□□□□□ -0.87
TPM1-228ENST00000560975 PLECQ15149 4684 aaKnown RBP9.62□□□□□ -0.87
TPM1-228ENST00000560975 IGLV5-52A0A0A0MRZ9 124 aa9.62□□□□□ -0.87
TPM1-228ENST00000560975 ZNF861PO60384 105 aa9.61□□□□□ -0.87
TPM1-228ENST00000560975 Q6ZRN7 208 aaPredicted RBP9.61□□□□□ -0.87
TPM1-228ENST00000560975 LINC01554Q52M75 96 aa9.6□□□□□ -0.87
TPM1-228ENST00000560975 SPATA8Q6RVD6 105 aa9.6□□□□□ -0.87
TPM1-228ENST00000560975 MIR22HGQ0VDD5 57 aa9.59□□□□□ -0.87
TPM1-228ENST00000560975 RTL8CO15255 209 aa9.57□□□□□ -0.88
TPM1-228ENST00000560975 UQCR11O14957 56 aa9.55□□□□□ -0.88
TPM1-228ENST00000560975 C4orf48Q5BLP8 95 aa9.55□□□□□ -0.88
TPM1-228ENST00000560975 HECTD4Q9Y4D8 3996 aa9.52□□□□□ -0.89
TPM1-228ENST00000560975 FAM229AH3BQW9 127 aa9.52□□□□□ -0.89
TPM1-228ENST00000560975 IGKV2-30P06310 120 aa9.51□□□□□ -0.89
TPM1-228ENST00000560975 A0A087WTM6 91 aa9.51□□□□□ -0.89
TPM1-228ENST00000560975 IGKV2D-30A0A075B6S6 120 aa9.49□□□□□ -0.89
TPM1-228ENST00000560975 CSAG1Q6PB30 78 aa9.49□□□□□ -0.89
TPM1-228ENST00000560975 DYNC2H1Q8NCM8 4307 aaKnown RBP9.48□□□□□ -0.89
TPM1-228ENST00000560975 DNAH17Q9UFH2 4485 aa9.48□□□□□ -0.89
TPM1-228ENST00000560975 IGLV7-43P04211 117 aa9.44□□□□□ -0.9
TPM1-228ENST00000560975 TGP01266 2768 aa9.43□□□□□ -0.9
TPM1-228ENST00000560975 SPINK1P00995 79 aa9.42□□□□□ -0.9
TPM1-228ENST00000560975 MEGF8Q7Z7M0 2845 aa9.4□□□□□ -0.91
TPM1-228ENST00000560975 H3BS24 57 aa9.38□□□□□ -0.91
TPM1-228ENST00000560975 SSBP3-AS1Q7Z2R9 100 aa9.38□□□□□ -0.91
TPM1-228ENST00000560975 VPS13DQ5THJ4 4388 aa9.38□□□□□ -0.91
TPM1-228ENST00000560975 STARD9Q9P2P6 4700 aa9.36□□□□□ -0.91
TPM1-228ENST00000560975 FBN3Q75N90 2809 aa9.36□□□□□ -0.91
TPM1-228ENST00000560975 DNAH2Q9P225 4427 aa9.35□□□□□ -0.91
TPM1-228ENST00000560975 KMT2AQ03164 3969 aa9.35□□□□□ -0.91
TPM1-228ENST00000560975 NUPR2A6NF83 97 aa9.34□□□□□ -0.91
TPM1-228ENST00000560975 KRTAP16-1A8MUX0 517 aa9.34□□□□□ -0.91
TPM1-228ENST00000560975 Q8N1X5 172 aa9.31□□□□□ -0.92
TPM1-228ENST00000560975 KRTAP13-2Q52LG2 175 aa9.3□□□□□ -0.92
TPM1-228ENST00000560975 DNAH11Q96DT5 4516 aa9.25□□□□□ -0.93
TPM1-228ENST00000560975 DNAH6Q9C0G6 4158 aa9.24□□□□□ -0.93
TPM1-228ENST00000560975 Q6ZSA8 131 aa9.18□□□□□ -0.94
TPM1-228ENST00000560975 H0YAA0 97 aa9.17□□□□□ -0.94
TPM1-228ENST00000560975 C1orf134Q5TEV5 83 aa9.16□□□□□ -0.94
TPM1-228ENST00000560975 PRKDCP78527 4128 aaKnown RBP9.16□□□□□ -0.94
TPM1-228ENST00000560975 FLG2Q5D862 2391 aaPredicted RBP9.16□□□□□ -0.94
TPM1-228ENST00000560975 TYMSOSQ8TAI1 123 aa9.14□□□□□ -0.95
TPM1-228ENST00000560975 LY6G6CO95867 125 aa9.14□□□□□ -0.95
TPM1-228ENST00000560975 A8MUU9 505 aa9.13□□□□□ -0.95
TPM1-228ENST00000560975 DNAH5Q8TE73 4624 aa9.12□□□□□ -0.95
TPM1-228ENST00000560975 LRP1BQ9NZR2 4599 aa9.11□□□□□ -0.95
TPM1-228ENST00000560975 LINC00304Q8N9R0 145 aa9.11□□□□□ -0.95
TPM1-228ENST00000560975 KRTAP10-2P60368 255 aa9.11□□□□□ -0.95
TPM1-228ENST00000560975 KRTAP25-1Q3LHN0 102 aa9.1□□□□□ -0.95
TPM1-228ENST00000560975 CRIPTQ9P021 101 aa9.07□□□□□ -0.96
TPM1-228ENST00000560975 KRTAP1-4P0C5Y4 121 aa9.06□□□□□ -0.96
TPM1-228ENST00000560975 A0A1B0GU33 70 aa9.05□□□□□ -0.96
TPM1-228ENST00000560975 ROMO1P60602 79 aa8.99□□□□□ -0.97
TPM1-228ENST00000560975 VPS13BQ7Z7G8 4022 aa8.98□□□□□ -0.97
TPM1-228ENST00000560975 KRTAP10-1P60331 282 aa8.98□□□□□ -0.97
TPM1-228ENST00000560975 H1FX-AS1Q4G0G2 97 aa8.98□□□□□ -0.97
TPM1-228ENST00000560975 KRTAP3-1Q9BYR8 98 aa8.94□□□□□ -0.98
TPM1-228ENST00000560975 C9orf92A6NGG3 77 aa8.94□□□□□ -0.98
TPM1-228ENST00000560975 K7ERS5 55 aa8.85□□□□□ -0.99
TPM1-228ENST00000560975 FAT2Q9NYQ8 4349 aa8.84□□□□□ -0.99
TPM1-228ENST00000560975 PKD1P98161 4303 aa8.84□□□□□ -0.99
TPM1-228ENST00000560975 COX6B2Q6YFQ2 88 aa8.83□□□□□ -1
TPM1-228ENST00000560975 P0C880 135 aa8.79□□□□□ -1
TPM1-228ENST00000560975 DMBT1Q9UGM3 2413 aaPredicted RBP8.77□□□□□ -1.01
TPM1-228ENST00000560975 C20orf166-AS1Q96NR2 134 aa8.75□□□□□ -1.01
TPM1-228ENST00000560975 HYDINQ4G0P3 5121 aa8.74□□□□□ -1.01
TPM1-228ENST00000560975 A0A0D9SG42 100 aa8.71□□□□□ -1.02
TPM1-228ENST00000560975 RPS29P62273 56 aaKnown RBP8.67□□□□□ -1.02
TPM1-228ENST00000560975 SPINT4Q6UDR6 99 aa8.66□□□□□ -1.02
TPM1-228ENST00000560975 SMR3BP02814 79 aaPredicted RBP8.65□□□□□ -1.02
TPM1-228ENST00000560975 RPL37P61927 97 aaKnown RBP8.64□□□□□ -1.03
TPM1-228ENST00000560975 TPRXLQ17RH7 258 aa8.63□□□□□ -1.03
TPM1-228ENST00000560975 KRTAP13-4Q3LI77 160 aa8.63□□□□□ -1.03
TPM1-228ENST00000560975 PKHD1P08F94 4074 aa8.61□□□□□ -1.03
TPM1-228ENST00000560975 C10orf95Q9H7T3 257 aa8.61□□□□□ -1.03
TPM1-228ENST00000560975 SACSQ9NZJ4 4579 aa8.6□□□□□ -1.03
TPM1-228ENST00000560975 KRTAP10-6P60371 365 aaPredicted RBP8.58□□□□□ -1.04
TPM1-228ENST00000560975 FAT1Q14517 4588 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms