RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 ZFYVE16Q7Z3T8 1539 aa-2.34□□□□□ -2.78
PSMA4-221ENST00000560842 SPEGQ15772 3267 aa-2.35□□□□□ -2.79
PSMA4-221ENST00000560842 SMIM11AP58511 58 aa-2.35□□□□□ -2.79
PSMA4-221ENST00000560842 ITSN2Q9NZM3 1697 aa-2.35□□□□□ -2.79
PSMA4-221ENST00000560842 ACYP1P07311 99 aa-2.36□□□□□ -2.79
PSMA4-221ENST00000560842 CLTCQ00610 1675 aaKnown RBP-2.37□□□□□ -2.79
PSMA4-221ENST00000560842 MT1FP04733 61 aa-2.37□□□□□ -2.79
PSMA4-221ENST00000560842 SARNPP82979 210 aaKnown RBP-2.37□□□□□ -2.79
PSMA4-221ENST00000560842 SMARCA2P51531 1590 aa-2.37□□□□□ -2.79
PSMA4-221ENST00000560842 PLIN4Q96Q06 1357 aa-2.37□□□□□ -2.79
PSMA4-221ENST00000560842 LINC00587B1AMM8 73 aa-2.38□□□□□ -2.79
PSMA4-221ENST00000560842 S100A10P60903 97 aa-2.38□□□□□ -2.79
PSMA4-221ENST00000560842 ITSN1Q15811 1721 aa-2.38□□□□□ -2.79
PSMA4-221ENST00000560842 DPY30Q9C005 99 aa-2.38□□□□□ -2.79
PSMA4-221ENST00000560842 NOP10Q9NPE3 64 aaKnown RBP-2.38□□□□□ -2.79
PSMA4-221ENST00000560842 KIF1AQ12756 1690 aa-2.38□□□□□ -2.79
PSMA4-221ENST00000560842 FANCAO15360 1455 aa-2.39□□□□□ -2.79
PSMA4-221ENST00000560842 RPS27P42677 84 aaKnown RBP-2.39□□□□□ -2.79
PSMA4-221ENST00000560842 RPS27LQ71UM5 84 aaKnown RBP-2.39□□□□□ -2.79
PSMA4-221ENST00000560842 FRYLO94915 3013 aa-2.39□□□□□ -2.79
PSMA4-221ENST00000560842 A0A1B0GUL6 1792 aa-2.4□□□□□ -2.79
PSMA4-221ENST00000560842 ZC3H13Q5T200 1668 aaKnown RBP-2.41□□□□□ -2.79
PSMA4-221ENST00000560842 M0QZ58 72 aa-2.41□□□□□ -2.8
PSMA4-221ENST00000560842 NDUFB1O75438 58 aa-2.41□□□□□ -2.8
PSMA4-221ENST00000560842 PEA15Q15121 130 aa-2.41□□□□□ -2.8
PSMA4-221ENST00000560842 ATP10BO94823 1461 aa-2.41□□□□□ -2.8
PSMA4-221ENST00000560842 SPART-AS1P0CW21 52 aa-2.42□□□□□ -2.8
PSMA4-221ENST00000560842 BVES-AS1Q5T3Y7 98 aa-2.42□□□□□ -2.8
PSMA4-221ENST00000560842 DIP2BQ9P265 1576 aa-2.42□□□□□ -2.8
PSMA4-221ENST00000560842 ARFGEF2Q9Y6D5 1785 aa-2.43□□□□□ -2.8
PSMA4-221ENST00000560842 PLCH1Q4KWH8 1693 aa-2.43□□□□□ -2.8
PSMA4-221ENST00000560842 A8MTW9 85 aa-2.43□□□□□ -2.8
PSMA4-221ENST00000560842 S100PP25815 95 aa-2.43□□□□□ -2.8
PSMA4-221ENST00000560842 TJP1Q07157 1748 aa-2.43□□□□□ -2.8
PSMA4-221ENST00000560842 TMEM131LA2VDJ0 1609 aa-2.43□□□□□ -2.8
PSMA4-221ENST00000560842 KIAA0586Q9BVV6 1533 aa-2.43□□□□□ -2.8
PSMA4-221ENST00000560842 H3BUA1 57 aa-2.44□□□□□ -2.8
PSMA4-221ENST00000560842 RPS29P62273 56 aaKnown RBP-2.44□□□□□ -2.8
PSMA4-221ENST00000560842 CEP350Q5VT06 3117 aa-2.44□□□□□ -2.8
PSMA4-221ENST00000560842 LRRIQ1Q96JM4 1722 aa-2.45□□□□□ -2.8
PSMA4-221ENST00000560842 CCNB3Q8WWL7 1395 aa-2.45□□□□□ -2.8
PSMA4-221ENST00000560842 DEFB131BA0A096LNP1 70 aa-2.45□□□□□ -2.8
PSMA4-221ENST00000560842 IFI27P40305 119 aaPredicted RBP-2.45□□□□□ -2.8
PSMA4-221ENST00000560842 PCNTO95613 3336 aa-2.45□□□□□ -2.8
PSMA4-221ENST00000560842 CENPEQ02224 2701 aa-2.46□□□□□ -2.8
PSMA4-221ENST00000560842 NEXMIFQ5QGS0 1516 aa-2.46□□□□□ -2.8
PSMA4-221ENST00000560842 M0QY20 66 aa-2.46□□□□□ -2.8
PSMA4-221ENST00000560842 NDUFA4O00483 81 aa-2.46□□□□□ -2.8
PSMA4-221ENST00000560842 CRIP1P50238 77 aa-2.46□□□□□ -2.8
PSMA4-221ENST00000560842 UBR1Q8IWV7 1749 aa-2.46□□□□□ -2.8
PSMA4-221ENST00000560842 NCOA2Q15596 1464 aa-2.46□□□□□ -2.8
PSMA4-221ENST00000560842 PPLO60437 1756 aa-2.47□□□□□ -2.8
PSMA4-221ENST00000560842 MYMXA0A1B0GTQ4 84 aa-2.48□□□□□ -2.81
PSMA4-221ENST00000560842 MINOS1Q5TGZ0 78 aa-2.48□□□□□ -2.81
PSMA4-221ENST00000560842 UMAD1C9J7I0 102 aa-2.49□□□□□ -2.81
PSMA4-221ENST00000560842 SFTA3P0C7M3 94 aa-2.49□□□□□ -2.81
PSMA4-221ENST00000560842 ACBD7Q8N6N7 88 aa-2.49□□□□□ -2.81
PSMA4-221ENST00000560842 C20orf78Q9BR46 151 aa-2.49□□□□□ -2.81
PSMA4-221ENST00000560842 THOC2Q8NI27 1593 aaKnown RBP-2.49□□□□□ -2.81
PSMA4-221ENST00000560842 GYPAP02724 150 aa-2.5□□□□□ -2.81
PSMA4-221ENST00000560842 NCBP2-AS2Q69YL0 99 aa-2.5□□□□□ -2.81
PSMA4-221ENST00000560842 NRAPQ86VF7 1730 aa-2.51□□□□□ -2.81
PSMA4-221ENST00000560842 DEFB136Q30KP8 78 aa-2.51□□□□□ -2.81
PSMA4-221ENST00000560842 C14orf144Q96I85 54 aa-2.51□□□□□ -2.81
PSMA4-221ENST00000560842 MRPL33O75394 65 aaKnown RBP-2.52□□□□□ -2.81
PSMA4-221ENST00000560842 RBP2P50120 134 aa-2.52□□□□□ -2.81
PSMA4-221ENST00000560842 SZT2Q5T011 3432 aa-2.52□□□□□ -2.81
PSMA4-221ENST00000560842 ERVK-7P63135 1459 aa-2.52□□□□□ -2.81
PSMA4-221ENST00000560842 CEBPZOSA8MTT3 80 aa-2.54□□□□□ -2.82
PSMA4-221ENST00000560842 FCER1GP30273 86 aa-2.54□□□□□ -2.82
PSMA4-221ENST00000560842 LEAP2Q969E1 77 aa-2.54□□□□□ -2.82
PSMA4-221ENST00000560842 TCEAL7Q9BRU2 100 aa-2.54□□□□□ -2.82
PSMA4-221ENST00000560842 CCDC88BA6NC98 1476 aa-2.54□□□□□ -2.82
PSMA4-221ENST00000560842 DNMBPQ6XZF7 1577 aa-2.54□□□□□ -2.82
PSMA4-221ENST00000560842 RICTORQ6R327 1708 aa-2.54□□□□□ -2.82
PSMA4-221ENST00000560842 MED14O60244 1454 aa-2.55□□□□□ -2.82
PSMA4-221ENST00000560842 C6orf48Q9UBA6 75 aa-2.55□□□□□ -2.82
PSMA4-221ENST00000560842 RABAC1Q9UI14 185 aa-2.55□□□□□ -2.82
PSMA4-221ENST00000560842 MYO3AQ8NEV4 1616 aa-2.56□□□□□ -2.82
PSMA4-221ENST00000560842 RNF17Q9BXT8 1623 aaKnown RBP-2.56□□□□□ -2.82
PSMA4-221ENST00000560842 URB2Q14146 1524 aaKnown RBP-2.56□□□□□ -2.82
PSMA4-221ENST00000560842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.56□□□□□ -2.82
PSMA4-221ENST00000560842 CNTLNQ9NXG0 1405 aa-2.56□□□□□ -2.82
PSMA4-221ENST00000560842 CD163L1Q9NR16 1453 aa-2.57□□□□□ -2.82
PSMA4-221ENST00000560842 NREPQ16612 68 aa-2.57□□□□□ -2.82
PSMA4-221ENST00000560842 KCNQ1DNQ9H478 68 aa-2.57□□□□□ -2.82
PSMA4-221ENST00000560842 MAP3K4Q9Y6R4 1608 aa-2.59□□□□□ -2.82
PSMA4-221ENST00000560842 NCMAPQ5T1S8 102 aa-2.59□□□□□ -2.82
PSMA4-221ENST00000560842 LINC00643Q86TS7 51 aa-2.59□□□□□ -2.82
PSMA4-221ENST00000560842 INO80Q9ULG1 1556 aaPredicted RBP-2.59□□□□□ -2.82
PSMA4-221ENST00000560842 PIK3C2BO00750 1634 aa-2.6□□□□□ -2.83
PSMA4-221ENST00000560842 ATP6V1G2-DDX39BF2Z307 99 aa-2.6□□□□□ -2.83
PSMA4-221ENST00000560842 SNRPFP62306 86 aaKnown RBP-2.6□□□□□ -2.83
PSMA4-221ENST00000560842 ARHGAP35Q9NRY4 1499 aa-2.6□□□□□ -2.83
PSMA4-221ENST00000560842 CEP162Q5TB80 1403 aa-2.6□□□□□ -2.83
PSMA4-221ENST00000560842 UBL5Q9BZL1 73 aa-2.61□□□□□ -2.83
PSMA4-221ENST00000560842 CROCC2H7BZ55 1655 aa-2.61□□□□□ -2.83
PSMA4-221ENST00000560842 CFAP43Q8NDM7 1665 aa-2.61□□□□□ -2.83
PSMA4-221ENST00000560842 KIF21BO75037 1637 aa-2.61□□□□□ -2.83
PSMA4-221ENST00000560842 MYO5CQ9NQX4 1742 aa-2.62□□□□□ -2.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms