RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TPRXLQ17RH7 258 aa3.32□□□□□ -1.88
USP3-215ENST00000559771 FAM229BQ4G0N7 80 aa3.32□□□□□ -1.88
USP3-215ENST00000559771 C14orf132Q9NPU4 83 aa3.32□□□□□ -1.88
USP3-215ENST00000559771 PRLHP81277 87 aa3.31□□□□□ -1.88
USP3-215ENST00000559771 LINC00304Q8N9R0 145 aa3.31□□□□□ -1.88
USP3-215ENST00000559771 SMCR5Q8TEV8 140 aa3.31□□□□□ -1.88
USP3-215ENST00000559771 DSCR8Q96T75 97 aa3.31□□□□□ -1.88
USP3-215ENST00000559771 UBL5Q9BZL1 73 aa3.31□□□□□ -1.88
USP3-215ENST00000559771 KCNQ1DNQ9H478 68 aa3.31□□□□□ -1.88
USP3-215ENST00000559771 IGLV7-46A0A075B6I9 117 aa3.3□□□□□ -1.88
USP3-215ENST00000559771 ATOX1O00244 68 aa3.3□□□□□ -1.88
USP3-215ENST00000559771 HIST1H4AP62805 103 aaKnown RBP3.3□□□□□ -1.88
USP3-215ENST00000559771 C3orf22Q8N5N4 141 aa3.3□□□□□ -1.88
USP3-215ENST00000559771 KRTAP4-1Q9BYQ7 146 aa3.3□□□□□ -1.88
USP3-215ENST00000559771 LINC00846Q9NV44 126 aa3.3□□□□□ -1.88
USP3-215ENST00000559771 DHRS4-AS1Q9P1J3 65 aa3.3□□□□□ -1.88
USP3-215ENST00000559771 UBE2AP49459 152 aa3.29□□□□□ -1.88
USP3-215ENST00000559771 Q6ZQT0 140 aa3.29□□□□□ -1.88
USP3-215ENST00000559771 Q6ZQY7 126 aa3.29□□□□□ -1.88
USP3-215ENST00000559771 NKAPP1Q8N9T2 125 aa3.29□□□□□ -1.88
USP3-215ENST00000559771 LAMTOR3Q9UHA4 124 aa3.29□□□□□ -1.88
USP3-215ENST00000559771 TRBV7-4A0A0J9YYF1 115 aa3.28□□□□□ -1.88
USP3-215ENST00000559771 FAM236AA0A1B0GUQ0 79 aa3.28□□□□□ -1.88
USP3-215ENST00000559771 FAM236BA0A1B0GV22 79 aa3.28□□□□□ -1.88
USP3-215ENST00000559771 UQCRQO14949 82 aa3.28□□□□□ -1.88
USP3-215ENST00000559771 CXCL6P80162 114 aa3.28□□□□□ -1.88
USP3-215ENST00000559771 FAM19A1Q7Z5A9 133 aa3.28□□□□□ -1.88
USP3-215ENST00000559771 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.88
USP3-215ENST00000559771 SPRR1AP35321 89 aa3.27□□□□□ -1.89
USP3-215ENST00000559771 KRTAP13-3Q3SY46 172 aa3.27□□□□□ -1.89
USP3-215ENST00000559771 SMIM20Q8N5G0 67 aa3.27□□□□□ -1.89
USP3-215ENST00000559771 Q6ZRX8 168 aa3.26□□□□□ -1.89
USP3-215ENST00000559771 SPRR4Q96PI1 79 aa3.26□□□□□ -1.89
USP3-215ENST00000559771 IGLV5-48A0A075B6I7 105 aa3.25□□□□□ -1.89
USP3-215ENST00000559771 KRTAP4-16G5E9R7 235 aaPredicted RBP3.25□□□□□ -1.89
USP3-215ENST00000559771 COX7CP15954 63 aa3.25□□□□□ -1.89
USP3-215ENST00000559771 ASB16-AS1Q495Z4 193 aa3.25□□□□□ -1.89
USP3-215ENST00000559771 SERP2Q8N6R1 65 aa3.25□□□□□ -1.89
USP3-215ENST00000559771 ETDCA0A1B0GVM5 59 aa3.24□□□□□ -1.89
USP3-215ENST00000559771 KRTAP10-12P60413 245 aa3.24□□□□□ -1.89
USP3-215ENST00000559771 KRTAP19-2Q3LHN2 52 aa3.24□□□□□ -1.89
USP3-215ENST00000559771 SPAG11AQ6PDA7 123 aa3.24□□□□□ -1.89
USP3-215ENST00000559771 FP248Q71RG6 208 aaPredicted RBP3.24□□□□□ -1.89
USP3-215ENST00000559771 HIGD2AQ9BW72 106 aa3.24□□□□□ -1.89
USP3-215ENST00000559771 IGKV3D-7A0A0C4DH55 119 aa3.23□□□□□ -1.89
USP3-215ENST00000559771 CCDC179H3BU77 68 aa3.23□□□□□ -1.89
USP3-215ENST00000559771 LINC01547P58512 204 aaPredicted RBP3.23□□□□□ -1.89
USP3-215ENST00000559771 Q6ZVQ6 151 aa3.23□□□□□ -1.89
USP3-215ENST00000559771 Q8NBF4 154 aa3.23□□□□□ -1.89
USP3-215ENST00000559771 ERC2-IT1O76042 136 aa3.22□□□□□ -1.89
USP3-215ENST00000559771 LINC00483Q53H64 154 aa3.22□□□□□ -1.89
USP3-215ENST00000559771 C9orf153Q5TBE3 101 aa3.22□□□□□ -1.89
USP3-215ENST00000559771 Q8N377 158 aa3.22□□□□□ -1.89
USP3-215ENST00000559771 NREPQ16612 68 aa3.21□□□□□ -1.9
USP3-215ENST00000559771 TRAV7A0A075B6U4 112 aa3.2□□□□□ -1.9
USP3-215ENST00000559771 SPINK1P00995 79 aa3.2□□□□□ -1.9
USP3-215ENST00000559771 Q9BRP9 147 aa3.2□□□□□ -1.9
USP3-215ENST00000559771 CRCT1Q9UGL9 99 aa3.2□□□□□ -1.9
USP3-215ENST00000559771 ZNF706Q9Y5V0 76 aaPredicted RBP3.2□□□□□ -1.9
USP3-215ENST00000559771 IGLV8-61A0A075B6I0 122 aa3.19□□□□□ -1.9
USP3-215ENST00000559771 F8WEM9 126 aa3.19□□□□□ -1.9
USP3-215ENST00000559771 TMEM258P61165 79 aa3.19□□□□□ -1.9
USP3-215ENST00000559771 RPS29P62273 56 aaKnown RBP3.19□□□□□ -1.9
USP3-215ENST00000559771 RPS28P62857 69 aaKnown RBP3.19□□□□□ -1.9
USP3-215ENST00000559771 A0A087WVE0 104 aa3.18□□□□□ -1.9
USP3-215ENST00000559771 BPY2O14599 106 aa3.18□□□□□ -1.9
USP3-215ENST00000559771 NDUFC1O43677 76 aa3.18□□□□□ -1.9
USP3-215ENST00000559771 SPRR1BP22528 89 aa3.18□□□□□ -1.9
USP3-215ENST00000559771 SEC61BP60468 96 aaKnown RBP3.18□□□□□ -1.9
USP3-215ENST00000559771 MT1HP80294 61 aa3.18□□□□□ -1.9
USP3-215ENST00000559771 MOBPQ13875 183 aa3.18□□□□□ -1.9
USP3-215ENST00000559771 DEFB105AQ8NG35 78 aa3.18□□□□□ -1.9
USP3-215ENST00000559771 MPLKIPQ8TAP9 179 aa3.18□□□□□ -1.9
USP3-215ENST00000559771 IGLV9-49A0A0B4J1Y8 123 aa3.17□□□□□ -1.9
USP3-215ENST00000559771 SSBP3-AS1Q7Z2R9 100 aa3.17□□□□□ -1.9
USP3-215ENST00000559771 SS18L2Q9UHA2 77 aa3.17□□□□□ -1.9
USP3-215ENST00000559771 KLKP1Q107X0 134 aa3.16□□□□□ -1.9
USP3-215ENST00000559771 SMIM29Q86T20 159 aa3.16□□□□□ -1.9
USP3-215ENST00000559771 A0A1W2PNM2 257 aa3.15□□□□□ -1.91
USP3-215ENST00000559771 ST20-AS1Q8NBB2 130 aa3.15□□□□□ -1.91
USP3-215ENST00000559771 J3KT08 172 aa3.14□□□□□ -1.91
USP3-215ENST00000559771 IGKV4-1P06312 121 aa3.14□□□□□ -1.91
USP3-215ENST00000559771 ATP5EP56381 51 aaPredicted RBP3.14□□□□□ -1.91
USP3-215ENST00000559771 FLGP20930 4061 aaPredicted RBP3.14□□□□□ -1.91
USP3-215ENST00000559771 PCOTHQ58A44 107 aa3.13□□□□□ -1.91
USP3-215ENST00000559771 IGKV2-30P06310 120 aa3.12□□□□□ -1.91
USP3-215ENST00000559771 IGFL1Q6UW32 110 aa3.12□□□□□ -1.91
USP3-215ENST00000559771 C20orf197Q8N268 126 aa3.12□□□□□ -1.91
USP3-215ENST00000559771 OCR1Q9BZK8 76 aa3.12□□□□□ -1.91
USP3-215ENST00000559771 C9orf92A6NGG3 77 aa3.11□□□□□ -1.91
USP3-215ENST00000559771 H7BZZ5 65 aa3.11□□□□□ -1.91
USP3-215ENST00000559771 DSCR10P59022 87 aa3.1□□□□□ -1.91
USP3-215ENST00000559771 C5orf47Q569G3 176 aa3.1□□□□□ -1.91
USP3-215ENST00000559771 HRCT1Q6UXD1 115 aa3.1□□□□□ -1.91
USP3-215ENST00000559771 TMEM254Q8TBM7 123 aa3.1□□□□□ -1.91
USP3-215ENST00000559771 FAM236DA0A1B0GTK5 79 aa3.09□□□□□ -1.91
USP3-215ENST00000559771 HCG22E2RYF7 251 aa3.09□□□□□ -1.91
USP3-215ENST00000559771 FAM236CP0DP71 79 aa3.09□□□□□ -1.91
USP3-215ENST00000559771 SERP1Q9Y6X1 66 aa3.09□□□□□ -1.91
USP3-215ENST00000559771 A0A087WSZ3 146 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms