RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 COX6A2Q02221 97 aa3.27□□□□□ -1.89
CTDSPL2-206ENST00000559175 TPRXLQ17RH7 258 aa3.27□□□□□ -1.89
CTDSPL2-206ENST00000559175 DYNC1H1Q14204 4646 aaKnown RBP3.27□□□□□ -1.89
CTDSPL2-206ENST00000559175 UNC79Q9P2D8 2635 aa3.27□□□□□ -1.89
CTDSPL2-206ENST00000559175 KRTAP10-3P60369 221 aa3.27□□□□□ -1.89
CTDSPL2-206ENST00000559175 LRRK2Q5S007 2527 aa3.26□□□□□ -1.89
CTDSPL2-206ENST00000559175 SACSQ9NZJ4 4579 aa3.26□□□□□ -1.89
CTDSPL2-206ENST00000559175 DNAH11Q96DT5 4516 aa3.26□□□□□ -1.89
CTDSPL2-206ENST00000559175 M0QY20 66 aa3.26□□□□□ -1.89
CTDSPL2-206ENST00000559175 ADGRG4Q8IZF6 3080 aa3.26□□□□□ -1.89
CTDSPL2-206ENST00000559175 NOP10Q9NPE3 64 aaKnown RBP3.26□□□□□ -1.89
CTDSPL2-206ENST00000559175 TNXBP22105 4242 aa3.25□□□□□ -1.89
CTDSPL2-206ENST00000559175 DSCR10P59022 87 aa3.24□□□□□ -1.89
CTDSPL2-206ENST00000559175 KRTAP11-1Q8IUC1 163 aa3.24□□□□□ -1.89
CTDSPL2-206ENST00000559175 H3BNG1 76 aa3.24□□□□□ -1.89
CTDSPL2-206ENST00000559175 PSORS1C2Q9UIG4 136 aa3.24□□□□□ -1.89
CTDSPL2-206ENST00000559175 IGLV6-57P01721 117 aa3.24□□□□□ -1.89
CTDSPL2-206ENST00000559175 FLG2Q5D862 2391 aaPredicted RBP3.23□□□□□ -1.89
CTDSPL2-206ENST00000559175 PLECQ15149 4684 aaKnown RBP3.23□□□□□ -1.89
CTDSPL2-206ENST00000559175 KRTAP10-2P60368 255 aa3.23□□□□□ -1.89
CTDSPL2-206ENST00000559175 POLQO75417 2590 aa3.23□□□□□ -1.89
CTDSPL2-206ENST00000559175 C10orf99Q6UWK7 81 aa3.23□□□□□ -1.89
CTDSPL2-206ENST00000559175 MTORP42345 2549 aa3.23□□□□□ -1.89
CTDSPL2-206ENST00000559175 ZFYVE26Q68DK2 2539 aa3.23□□□□□ -1.89
CTDSPL2-206ENST00000559175 FBN1P35555 2871 aaKnown RBP3.22□□□□□ -1.89
CTDSPL2-206ENST00000559175 ANGP03950 147 aaKnown RBP3.22□□□□□ -1.89
CTDSPL2-206ENST00000559175 C6orf48Q9UBA6 75 aa3.22□□□□□ -1.89
CTDSPL2-206ENST00000559175 CLPSL2Q6UWE3 100 aa3.21□□□□□ -1.89
CTDSPL2-206ENST00000559175 STARD9Q9P2P6 4700 aa3.21□□□□□ -1.9
CTDSPL2-206ENST00000559175 A0A096LPF7 62 aa3.21□□□□□ -1.9
CTDSPL2-206ENST00000559175 JMJD1CQ15652 2540 aa3.21□□□□□ -1.9
CTDSPL2-206ENST00000559175 NSD1Q96L73 2696 aaPredicted RBP3.21□□□□□ -1.9
CTDSPL2-206ENST00000559175 PRO0255Q9UI72 69 aa3.18□□□□□ -1.9
CTDSPL2-206ENST00000559175 TACC2O95359 2948 aa3.18□□□□□ -1.9
CTDSPL2-206ENST00000559175 Q6ZRX8 168 aa3.18□□□□□ -1.9
CTDSPL2-206ENST00000559175 DEFB105AQ8NG35 78 aa3.18□□□□□ -1.9
CTDSPL2-206ENST00000559175 ACANP16112 2415 aa3.16□□□□□ -1.9
CTDSPL2-206ENST00000559175 MXRA5Q9NR99 2828 aa3.16□□□□□ -1.9
CTDSPL2-206ENST00000559175 FBN3Q75N90 2809 aa3.16□□□□□ -1.9
CTDSPL2-206ENST00000559175 SPART-AS1P0CW21 52 aa3.16□□□□□ -1.9
CTDSPL2-206ENST00000559175 TEP1Q99973 2627 aaKnown RBP3.16□□□□□ -1.9
CTDSPL2-206ENST00000559175 TP53AIP1Q9HCN2 124 aa3.15□□□□□ -1.9
CTDSPL2-206ENST00000559175 FAT1Q14517 4588 aa3.15□□□□□ -1.9
CTDSPL2-206ENST00000559175 IGKV2-24A0A0C4DH68 120 aa3.15□□□□□ -1.9
CTDSPL2-206ENST00000559175 DEFB135Q30KP9 77 aa3.15□□□□□ -1.9
CTDSPL2-206ENST00000559175 MEGF8Q7Z7M0 2845 aa3.15□□□□□ -1.91
CTDSPL2-206ENST00000559175 HIVEP1P15822 2718 aa3.15□□□□□ -1.91
CTDSPL2-206ENST00000559175 HELZ2Q9BYK8 2649 aaKnown RBP3.15□□□□□ -1.91
CTDSPL2-206ENST00000559175 CENPEQ02224 2701 aa3.15□□□□□ -1.91
CTDSPL2-206ENST00000559175 DEFB4AO15263 64 aa3.14□□□□□ -1.91
CTDSPL2-206ENST00000559175 HSPG2P98160 4391 aa3.14□□□□□ -1.91
CTDSPL2-206ENST00000559175 ITPR3Q14573 2671 aa3.14□□□□□ -1.91
CTDSPL2-206ENST00000559175 RYR3Q15413 4870 aa3.14□□□□□ -1.91
CTDSPL2-206ENST00000559175 MAP1AP78559 2803 aaPredicted RBP3.13□□□□□ -1.91
CTDSPL2-206ENST00000559175 ITPR2Q14571 2701 aa3.12□□□□□ -1.91
CTDSPL2-206ENST00000559175 FASNP49327 2511 aaKnown RBP3.11□□□□□ -1.91
CTDSPL2-206ENST00000559175 LRP1BQ9NZR2 4599 aa3.11□□□□□ -1.91
CTDSPL2-206ENST00000559175 LY6G6CO95867 125 aa3.11□□□□□ -1.91
CTDSPL2-206ENST00000559175 COL12A1Q99715 3063 aa3.1□□□□□ -1.91
CTDSPL2-206ENST00000559175 IGLV5-48A0A075B6I7 105 aa3.1□□□□□ -1.91
CTDSPL2-206ENST00000559175 APOBP04114 4563 aaKnown RBP3.1□□□□□ -1.91
CTDSPL2-206ENST00000559175 HYDINQ4G0P3 5121 aa3.1□□□□□ -1.91
CTDSPL2-206ENST00000559175 DNAH5Q8TE73 4624 aa3.1□□□□□ -1.91
CTDSPL2-206ENST00000559175 UBE2DNLQ8IWF7 75 aa3.1□□□□□ -1.91
CTDSPL2-206ENST00000559175 COL7A1Q02388 2944 aa3.09□□□□□ -1.91
CTDSPL2-206ENST00000559175 GVQW2A0A096LPI5 108 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL2-206ENST00000559175 ZANQ9Y493 2812 aa3.09□□□□□ -1.91
CTDSPL2-206ENST00000559175 F8P00451 2351 aa3.09□□□□□ -1.92
CTDSPL2-206ENST00000559175 MAST4O15021 2626 aa3.09□□□□□ -1.92
CTDSPL2-206ENST00000559175 TEX15Q9BXT5 2789 aa3.09□□□□□ -1.92
CTDSPL2-206ENST00000559175 HERC2O95714 4834 aa3.08□□□□□ -1.92
CTDSPL2-206ENST00000559175 LELP1Q5T871 98 aa3.08□□□□□ -1.92
CTDSPL2-206ENST00000559175 KRTAP10-8P60410 259 aa3.07□□□□□ -1.92
CTDSPL2-206ENST00000559175 KRTAP10-11P60412 298 aa3.07□□□□□ -1.92
CTDSPL2-206ENST00000559175 PLAC4Q8WY50 150 aa3.07□□□□□ -1.92
CTDSPL2-206ENST00000559175 UNQ6190/PRO20217Q6UXQ8 127 aa3.07□□□□□ -1.92
CTDSPL2-206ENST00000559175 C10orf95Q9H7T3 257 aa3.06□□□□□ -1.92
CTDSPL2-206ENST00000559175 FLNAP21333 2647 aaKnown RBP3.05□□□□□ -1.92
CTDSPL2-206ENST00000559175 MUC17Q685J3 4493 aa3.04□□□□□ -1.92
CTDSPL2-206ENST00000559175 BIRC6Q9NR09 4857 aa3.04□□□□□ -1.92
CTDSPL2-206ENST00000559175 KMT2CQ8NEZ4 4911 aaKnown RBP3.04□□□□□ -1.92
CTDSPL2-206ENST00000559175 H0YAA0 97 aa3.04□□□□□ -1.92
CTDSPL2-206ENST00000559175 IGFL1Q6UW32 110 aa3.04□□□□□ -1.92
CTDSPL2-206ENST00000559175 SMR3AQ99954 134 aa3.04□□□□□ -1.92
CTDSPL2-206ENST00000559175 MRPL34Q9BQ48 92 aaKnown RBP3.03□□□□□ -1.92
CTDSPL2-206ENST00000559175 FLNBO75369 2602 aaKnown RBP3.03□□□□□ -1.92
CTDSPL2-206ENST00000559175 XP32Q5T750 250 aa3.03□□□□□ -1.92
CTDSPL2-206ENST00000559175 Q6ZRN7 208 aaPredicted RBP3.02□□□□□ -1.93
CTDSPL2-206ENST00000559175 SETXQ7Z333 2677 aaKnown RBP3.02□□□□□ -1.93
CTDSPL2-206ENST00000559175 HECTD1Q9ULT8 2610 aa3.01□□□□□ -1.93
CTDSPL2-206ENST00000559175 PRLHP81277 87 aa3□□□□□ -1.93
CTDSPL2-206ENST00000559175 NIPBLQ6KC79 2804 aaeCLIP3□□□□□ -1.93
CTDSPL2-206ENST00000559175 MMP24-AS1A0A0U1RRL7 71 aa3□□□□□ -1.93
CTDSPL2-206ENST00000559175 A0A1B0GVY2 172 aa3□□□□□ -1.93
CTDSPL2-206ENST00000559175 KRTAP19-4Q3LI73 84 aa3□□□□□ -1.93
CTDSPL2-206ENST00000559175 LCE5AQ5TCM9 118 aa3□□□□□ -1.93
CTDSPL2-206ENST00000559175 ANAPC11Q9NYG5 84 aa3□□□□□ -1.93
CTDSPL2-206ENST00000559175 LINC01556Q5JQF7 62 aa2.99□□□□□ -1.93
CTDSPL2-206ENST00000559175 ATRQ13535 2644 aa2.99□□□□□ -1.93
CTDSPL2-206ENST00000559175 SPINK1P00995 79 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms