RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 HIST1H2BCP62807 126 aa2.62□□□□□ -1.99
LRRC28-208ENST00000558771 HIST2H2BEQ16778 126 aa2.62□□□□□ -1.99
LRRC28-208ENST00000558771 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.62□□□□□ -1.99
LRRC28-208ENST00000558771 Q6JHZ5 121 aa2.62□□□□□ -1.99
LRRC28-208ENST00000558771 HIST1H2BHQ93079 126 aa2.62□□□□□ -1.99
LRRC28-208ENST00000558771 HIST1H2BNQ99877 126 aa2.62□□□□□ -1.99
LRRC28-208ENST00000558771 HIST1H2BMQ99879 126 aa2.62□□□□□ -1.99
LRRC28-208ENST00000558771 HIST1H2BLQ99880 126 aa2.62□□□□□ -1.99
LRRC28-208ENST00000558771 A0A1B0GV72 72 aa2.61□□□□□ -1.99
LRRC28-208ENST00000558771 K7ERU9 68 aa2.61□□□□□ -1.99
LRRC28-208ENST00000558771 SERF1AO75920 110 aa2.61□□□□□ -1.99
LRRC28-208ENST00000558771 NHP2Q9NX24 153 aaKnown RBP2.61□□□□□ -1.99
LRRC28-208ENST00000558771 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
LRRC28-208ENST00000558771 TRAV13-2A0A0B4J235 113 aa2.6□□□□□ -1.99
LRRC28-208ENST00000558771 A6NDN8 102 aa2.6□□□□□ -1.99
LRRC28-208ENST00000558771 FABP4P15090 132 aa2.6□□□□□ -1.99
LRRC28-208ENST00000558771 OCIAD2Q56VL3 154 aa2.6□□□□□ -1.99
LRRC28-208ENST00000558771 Q6ZVH6 145 aa2.6□□□□□ -1.99
LRRC28-208ENST00000558771 HSPB8Q9UJY1 196 aa2.6□□□□□ -1.99
LRRC28-208ENST00000558771 ZNF815PA8K554 130 aa2.59□□□□□ -1.99
LRRC28-208ENST00000558771 A8MWP4 228 aa2.59□□□□□ -1.99
LRRC28-208ENST00000558771 Q6ZQY7 126 aa2.59□□□□□ -1.99
LRRC28-208ENST00000558771 MTURNQ8N3F0 131 aa2.59□□□□□ -1.99
LRRC28-208ENST00000558771 VPS25Q9BRG1 176 aa2.59□□□□□ -1.99
LRRC28-208ENST00000558771 TTTY13Q9BZ97 58 aa2.59□□□□□ -1.99
LRRC28-208ENST00000558771 SMIM11BQ8TCY0 68 aa2.58□□□□□ -2
LRRC28-208ENST00000558771 KRTAP4-3Q9BYR4 195 aa2.58□□□□□ -2
LRRC28-208ENST00000558771 hADV29S1A0JD25 119 aa2.57□□□□□ -2
LRRC28-208ENST00000558771 H3BUT2 72 aa2.57□□□□□ -2
LRRC28-208ENST00000558771 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
LRRC28-208ENST00000558771 LINC00575Q6W349 94 aa2.57□□□□□ -2
LRRC28-208ENST00000558771 SS18L2Q9UHA2 77 aa2.57□□□□□ -2
LRRC28-208ENST00000558771 TRGC2P03986 189 aa2.56□□□□□ -2
LRRC28-208ENST00000558771 LINC00313P59037 77 aa2.56□□□□□ -2
LRRC28-208ENST00000558771 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
LRRC28-208ENST00000558771 UQCR10Q9UDW1 63 aa2.56□□□□□ -2
LRRC28-208ENST00000558771 A0A087WSZ3 146 aa2.55□□□□□ -2
LRRC28-208ENST00000558771 IFITM1P13164 125 aa2.55□□□□□ -2
LRRC28-208ENST00000558771 SCGB1D4Q6XE38 83 aa2.55□□□□□ -2
LRRC28-208ENST00000558771 MUSTN1Q8IVN3 82 aa2.55□□□□□ -2
LRRC28-208ENST00000558771 COPS9Q8WXC6 57 aa2.55□□□□□ -2
LRRC28-208ENST00000558771 VAMP8Q9BV40 100 aa2.55□□□□□ -2
LRRC28-208ENST00000558771 MDN1Q9NU22 5596 aa2.54□□□□□ -2
LRRC28-208ENST00000558771 A6NN06 94 aa2.54□□□□□ -2
LRRC28-208ENST00000558771 SYS1-DBNDD2H3BUS1 97 aa2.54□□□□□ -2
LRRC28-208ENST00000558771 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.54□□□□□ -2
LRRC28-208ENST00000558771 SIGMAR1Q99720 223 aa2.54□□□□□ -2
LRRC28-208ENST00000558771 KMT2DO14686 5537 aa2.53□□□□□ -2
LRRC28-208ENST00000558771 A8MU10 97 aa2.53□□□□□ -2
LRRC28-208ENST00000558771 KRTAP2-3P0C7H8 128 aa2.53□□□□□ -2
LRRC28-208ENST00000558771 LINC01545Q5VT33 79 aa2.53□□□□□ -2
LRRC28-208ENST00000558771 TEN1Q86WV5 123 aa2.53□□□□□ -2
LRRC28-208ENST00000558771 PPDPFLQ8WWR9 84 aa2.53□□□□□ -2
LRRC28-208ENST00000558771 KRTAP2-4Q9BYR9 128 aa2.53□□□□□ -2
LRRC28-208ENST00000558771 V9GYY9 64 aa2.52□□□□□ -2.01
LRRC28-208ENST00000558771 IGKV4-1P06312 121 aa2.51□□□□□ -2.01
LRRC28-208ENST00000558771 SPINK7P58062 85 aa2.51□□□□□ -2.01
LRRC28-208ENST00000558771 BATFQ16520 125 aa2.51□□□□□ -2.01
LRRC28-208ENST00000558771 GTF2H5Q6ZYL4 71 aa2.51□□□□□ -2.01
LRRC28-208ENST00000558771 J3QR89 54 aa2.5□□□□□ -2.01
LRRC28-208ENST00000558771 TAX1BP3O14907 124 aa2.5□□□□□ -2.01
LRRC28-208ENST00000558771 KRTAP12-2P59991 146 aa2.5□□□□□ -2.01
LRRC28-208ENST00000558771 SPATA45Q537H7 98 aa2.5□□□□□ -2.01
LRRC28-208ENST00000558771 SMIM20Q8N5G0 67 aa2.5□□□□□ -2.01
LRRC28-208ENST00000558771 IGHV6-1A0A0B4J1U7 121 aa2.49□□□□□ -2.01
LRRC28-208ENST00000558771 A0A1W2PNM2 257 aa2.49□□□□□ -2.01
LRRC28-208ENST00000558771 MT1BP07438 61 aa2.49□□□□□ -2.01
LRRC28-208ENST00000558771 HSD52Q0P140 79 aa2.49□□□□□ -2.01
LRRC28-208ENST00000558771 WFDC13Q8IUB5 93 aa2.49□□□□□ -2.01
LRRC28-208ENST00000558771 ZCCHC13Q8WW36 166 aaKnown RBP2.49□□□□□ -2.01
LRRC28-208ENST00000558771 K7EP34 96 aa2.48□□□□□ -2.01
LRRC28-208ENST00000558771 C3orf79P0CE67 100 aa2.48□□□□□ -2.01
LRRC28-208ENST00000558771 DEFB116Q30KQ4 102 aa2.48□□□□□ -2.01
LRRC28-208ENST00000558771 BVES-AS1Q5T3Y7 98 aa2.48□□□□□ -2.01
LRRC28-208ENST00000558771 H3BMG7 143 aa2.47□□□□□ -2.01
LRRC28-208ENST00000558771 C4orf26Q17RF5 130 aa2.46□□□□□ -2.02
LRRC28-208ENST00000558771 ATOH7Q8N100 152 aa2.46□□□□□ -2.02
LRRC28-208ENST00000558771 LINC00472Q9H8W2 130 aa2.46□□□□□ -2.02
LRRC28-208ENST00000558771 C8orf87E5RJ46 101 aa2.45□□□□□ -2.02
LRRC28-208ENST00000558771 KRTDAPP60985 99 aa2.45□□□□□ -2.02
LRRC28-208ENST00000558771 CXCL6P80162 114 aa2.45□□□□□ -2.02
LRRC28-208ENST00000558771 H1FX-AS1Q4G0G2 97 aa2.45□□□□□ -2.02
LRRC28-208ENST00000558771 Q5VV11 94 aa2.45□□□□□ -2.02
LRRC28-208ENST00000558771 PRO0628Q9UI54 55 aa2.45□□□□□ -2.02
LRRC28-208ENST00000558771 TRBV7-4A0A0J9YYF1 115 aa2.44□□□□□ -2.02
LRRC28-208ENST00000558771 A0A1B0GVX0 72 aa2.44□□□□□ -2.02
LRRC28-208ENST00000558771 F8W1H4 67 aa2.44□□□□□ -2.02
LRRC28-208ENST00000558771 SPRR2EP22531 72 aa2.44□□□□□ -2.02
LRRC28-208ENST00000558771 SPRR2BP35325 72 aa2.44□□□□□ -2.02
LRRC28-208ENST00000558771 SPRR2AP35326 72 aa2.44□□□□□ -2.02
LRRC28-208ENST00000558771 KRTAP19-8Q3LI54 63 aa2.44□□□□□ -2.02
LRRC28-208ENST00000558771 RAB37Q96AX2 223 aa2.44□□□□□ -2.02
LRRC28-208ENST00000558771 KRTAP2-1Q9BYU5 128 aa2.44□□□□□ -2.02
LRRC28-208ENST00000558771 A0A1W2PPM0 123 aa2.43□□□□□ -2.02
LRRC28-208ENST00000558771 SNCGO76070 127 aa2.43□□□□□ -2.02
LRRC28-208ENST00000558771 COX8AP10176 69 aa2.43□□□□□ -2.02
LRRC28-208ENST00000558771 FABP2P12104 132 aa2.43□□□□□ -2.02
LRRC28-208ENST00000558771 ANKRD29Q8N6D5 301 aa2.43□□□□□ -2.02
LRRC28-208ENST00000558771 SPRR2FQ96RM1 72 aa2.42□□□□□ -2.02
LRRC28-208ENST00000558771 SPCS1Q9Y6A9 102 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms