RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 TRBV7-7A0A0K0K1E9 115 aa2.24□□□□□ -2.05
SPG11-211ENST00000558561 LOC105371267A0A1B0GV96 52 aa2.24□□□□□ -2.05
SPG11-211ENST00000558561 A0A1W2PNM2 257 aa2.24□□□□□ -2.05
SPG11-211ENST00000558561 CD164Q04900 197 aa2.24□□□□□ -2.05
SPG11-211ENST00000558561 DEFB116Q30KQ4 102 aa2.24□□□□□ -2.05
SPG11-211ENST00000558561 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.24□□□□□ -2.05
SPG11-211ENST00000558561 SNHG12Q9BXW3 62 aa2.24□□□□□ -2.05
SPG11-211ENST00000558561 FABP2P12104 132 aa2.23□□□□□ -2.05
SPG11-211ENST00000558561 HSD52Q0P140 79 aa2.23□□□□□ -2.05
SPG11-211ENST00000558561 Q5XG85 94 aa2.23□□□□□ -2.05
SPG11-211ENST00000558561 Q96NJ1 140 aa2.23□□□□□ -2.05
SPG11-211ENST00000558561 UQCR10Q9UDW1 63 aa2.23□□□□□ -2.05
SPG11-211ENST00000558561 H0YGX0 51 aa2.22□□□□□ -2.05
SPG11-211ENST00000558561 H3BMG7 143 aa2.22□□□□□ -2.05
SPG11-211ENST00000558561 PRO0461Q9UI25 63 aa2.22□□□□□ -2.05
SPG11-211ENST00000558561 A0A087WSZ3 146 aa2.21□□□□□ -2.06
SPG11-211ENST00000558561 PSMB2P49721 201 aa2.21□□□□□ -2.06
SPG11-211ENST00000558561 OBSCN-AS1Q96MR7 158 aa2.21□□□□□ -2.06
SPG11-211ENST00000558561 LIMD2Q9BT23 127 aa2.21□□□□□ -2.06
SPG11-211ENST00000558561 FLGP20930 4061 aaPredicted RBP2.2□□□□□ -2.06
SPG11-211ENST00000558561 F8WEM9 126 aa2.2□□□□□ -2.06
SPG11-211ENST00000558561 TCL1BO95988 128 aa2.2□□□□□ -2.06
SPG11-211ENST00000558561 RPL37P61927 97 aaKnown RBP2.2□□□□□ -2.06
SPG11-211ENST00000558561 MT1HP80294 61 aa2.2□□□□□ -2.06
SPG11-211ENST00000558561 Q6JHZ5 121 aa2.2□□□□□ -2.06
SPG11-211ENST00000558561 LST1O00453 97 aa2.19□□□□□ -2.06
SPG11-211ENST00000558561 BAALC-AS2P0C853 105 aa2.19□□□□□ -2.06
SPG11-211ENST00000558561 SCGB1C2P0DMR2 95 aa2.19□□□□□ -2.06
SPG11-211ENST00000558561 TEN1Q86WV5 123 aa2.19□□□□□ -2.06
SPG11-211ENST00000558561 ANKRD29Q8N6D5 301 aa2.19□□□□□ -2.06
SPG11-211ENST00000558561 A0A1B0GX51 115 aa2.18□□□□□ -2.06
SPG11-211ENST00000558561 Q6Q795 121 aa2.18□□□□□ -2.06
SPG11-211ENST00000558561 MTURNQ8N3F0 131 aa2.18□□□□□ -2.06
SPG11-211ENST00000558561 PPDPFLQ8WWR9 84 aa2.18□□□□□ -2.06
SPG11-211ENST00000558561 LINC00472Q9H8W2 130 aa2.18□□□□□ -2.06
SPG11-211ENST00000558561 ORMDL1Q9P0S3 153 aa2.18□□□□□ -2.06
SPG11-211ENST00000558561 IGKV4-1P06312 121 aa2.17□□□□□ -2.06
SPG11-211ENST00000558561 BATFQ16520 125 aa2.17□□□□□ -2.06
SPG11-211ENST00000558561 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
SPG11-211ENST00000558561 TRBV7-4A0A0J9YYF1 115 aa2.16□□□□□ -2.06
SPG11-211ENST00000558561 A8MUU9 505 aa2.16□□□□□ -2.06
SPG11-211ENST00000558561 TMEM256-PLSCR3K7ERE1 68 aa2.16□□□□□ -2.06
SPG11-211ENST00000558561 TAX1BP3O14907 124 aa2.16□□□□□ -2.06
SPG11-211ENST00000558561 TRACP01848 142 aa2.16□□□□□ -2.06
SPG11-211ENST00000558561 CCKP06307 115 aa2.16□□□□□ -2.06
SPG11-211ENST00000558561 LCE3AQ5TA76 89 aa2.16□□□□□ -2.06
SPG11-211ENST00000558561 VPS25Q9BRG1 176 aa2.16□□□□□ -2.06
SPG11-211ENST00000558561 KRTAP4-3Q9BYR4 195 aa2.16□□□□□ -2.06
SPG11-211ENST00000558561 DNAL4O96015 105 aa2.15□□□□□ -2.07
SPG11-211ENST00000558561 COX6CP09669 75 aa2.15□□□□□ -2.07
SPG11-211ENST00000558561 SMIM6P0DI80 62 aa2.15□□□□□ -2.07
SPG11-211ENST00000558561 RBM3P98179 157 aaKnown RBP2.15□□□□□ -2.07
SPG11-211ENST00000558561 Q8N9L7 120 aa2.15□□□□□ -2.07
SPG11-211ENST00000558561 C20orf166-AS1Q96NR2 134 aa2.15□□□□□ -2.07
SPG11-211ENST00000558561 IGHV6-1A0A0B4J1U7 121 aa2.14□□□□□ -2.07
SPG11-211ENST00000558561 A0A0U1RQV1 116 aa2.14□□□□□ -2.07
SPG11-211ENST00000558561 SNCGO76070 127 aa2.14□□□□□ -2.07
SPG11-211ENST00000558561 LINC00313P59037 77 aa2.14□□□□□ -2.07
SPG11-211ENST00000558561 SIGMAR1Q99720 223 aa2.14□□□□□ -2.07
SPG11-211ENST00000558561 C14orf132Q9NPU4 83 aa2.14□□□□□ -2.07
SPG11-211ENST00000558561 C9JAW5 83 aa2.13□□□□□ -2.07
SPG11-211ENST00000558561 ATP11AUNQ6ZP68 121 aa2.13□□□□□ -2.07
SPG11-211ENST00000558561 Q6ZQT0 140 aa2.13□□□□□ -2.07
SPG11-211ENST00000558561 M0R143 59 aa2.12□□□□□ -2.07
SPG11-211ENST00000558561 HRES1P13985 223 aa2.12□□□□□ -2.07
SPG11-211ENST00000558561 ATXN8Q156A1 80 aa2.12□□□□□ -2.07
SPG11-211ENST00000558561 DSCR8Q96T75 97 aa2.12□□□□□ -2.07
SPG11-211ENST00000558561 SS18L2Q9UHA2 77 aa2.12□□□□□ -2.07
SPG11-211ENST00000558561 IGKV3D-7A0A0C4DH55 119 aa2.11□□□□□ -2.07
SPG11-211ENST00000558561 A0A1B0GVX0 72 aa2.11□□□□□ -2.07
SPG11-211ENST00000558561 A0A1W2PPM0 123 aa2.11□□□□□ -2.07
SPG11-211ENST00000558561 TSTD3H0UI37 97 aa2.11□□□□□ -2.07
SPG11-211ENST00000558561 PCP4L1A6NKN8 68 aa2.1□□□□□ -2.07
SPG11-211ENST00000558561 M0R2T5 61 aa2.1□□□□□ -2.07
SPG11-211ENST00000558561 COX6B2Q6YFQ2 88 aa2.1□□□□□ -2.07
SPG11-211ENST00000558561 FSIP2Q5CZC0 6907 aa2.1□□□□□ -2.07
SPG11-211ENST00000558561 LOC110117498A0A087WWA1 95 aa2.09□□□□□ -2.07
SPG11-211ENST00000558561 H3BQ85 93 aa2.09□□□□□ -2.07
SPG11-211ENST00000558561 C8orf17Q9NRJ1 99 aa2.09□□□□□ -2.07
SPG11-211ENST00000558561 TRBV20-1A0A075B6N2 111 aa2.08□□□□□ -2.08
SPG11-211ENST00000558561 JMJD7-PLA2G4BH0Y9G9 81 aa2.08□□□□□ -2.08
SPG11-211ENST00000558561 Q5W150 140 aa2.08□□□□□ -2.08
SPG11-211ENST00000558561 SPCS1Q9Y6A9 102 aa2.08□□□□□ -2.08
SPG11-211ENST00000558561 MMP24-AS1A0A0U1RRL7 71 aa2.07□□□□□ -2.08
SPG11-211ENST00000558561 A8MWP4 228 aa2.07□□□□□ -2.08
SPG11-211ENST00000558561 K7EQZ3 153 aa2.07□□□□□ -2.08
SPG11-211ENST00000558561 BPY2O14599 106 aa2.07□□□□□ -2.08
SPG11-211ENST00000558561 MT2AP02795 61 aa2.07□□□□□ -2.08
SPG11-211ENST00000558561 SPINK7P58062 85 aa2.07□□□□□ -2.08
SPG11-211ENST00000558561 NREPQ16612 68 aa2.07□□□□□ -2.08
SPG11-211ENST00000558561 PRR15Q8IV56 129 aa2.07□□□□□ -2.08
SPG11-211ENST00000558561 ZCCHC13Q8WW36 166 aaKnown RBP2.07□□□□□ -2.08
SPG11-211ENST00000558561 CRCT1Q9UGL9 99 aa2.07□□□□□ -2.08
SPG11-211ENST00000558561 C8orf87E5RJ46 101 aa2.06□□□□□ -2.08
SPG11-211ENST00000558561 MT1FP04733 61 aa2.06□□□□□ -2.08
SPG11-211ENST00000558561 LINC00846Q9NV44 126 aa2.06□□□□□ -2.08
SPG11-211ENST00000558561 H3BT86 120 aa2.05□□□□□ -2.08
SPG11-211ENST00000558561 K7EP34 96 aa2.05□□□□□ -2.08
SPG11-211ENST00000558561 WFDC13Q8IUB5 93 aa2.05□□□□□ -2.08
SPG11-211ENST00000558561 FAM236DA0A1B0GTK5 79 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms