RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 GHRHP01286 108 aa7.02□□□□□ -1.29
TMEM260-215ENST00000557626 LCE3BQ5TA77 95 aa7.02□□□□□ -1.29
TMEM260-215ENST00000557626 F8WEM9 126 aa7.01□□□□□ -1.29
TMEM260-215ENST00000557626 TRBV7-4A0A0J9YYF1 115 aa7□□□□□ -1.29
TMEM260-215ENST00000557626 A0A1W2PNM2 257 aa7□□□□□ -1.29
TMEM260-215ENST00000557626 Q6JHZ5 121 aa7□□□□□ -1.29
TMEM260-215ENST00000557626 GTF2H5Q6ZYL4 71 aa7□□□□□ -1.29
TMEM260-215ENST00000557626 KRTAP4-12Q9BQ66 201 aa7□□□□□ -1.29
TMEM260-215ENST00000557626 HRCT1Q6UXD1 115 aa6.99□□□□□ -1.29
TMEM260-215ENST00000557626 MT2AP02795 61 aa6.98□□□□□ -1.29
TMEM260-215ENST00000557626 Q6Q795 121 aa6.98□□□□□ -1.29
TMEM260-215ENST00000557626 KRTAP9-3Q9BYQ3 159 aa6.98□□□□□ -1.29
TMEM260-215ENST00000557626 CD164Q04900 197 aa6.97□□□□□ -1.29
TMEM260-215ENST00000557626 RBM3P98179 157 aaKnown RBP6.96□□□□□ -1.3
TMEM260-215ENST00000557626 F8W1H4 67 aa6.95□□□□□ -1.3
TMEM260-215ENST00000557626 C14orf132Q9NPU4 83 aa6.95□□□□□ -1.3
TMEM260-215ENST00000557626 LOC110117498A0A087WWA1 95 aa6.94□□□□□ -1.3
TMEM260-215ENST00000557626 TRBV7-7A0A0K0K1E9 115 aa6.94□□□□□ -1.3
TMEM260-215ENST00000557626 JMJD7-PLA2G4BH0Y9G9 81 aa6.94□□□□□ -1.3
TMEM260-215ENST00000557626 Q6ZQT0 140 aa6.94□□□□□ -1.3
TMEM260-215ENST00000557626 KMT2DO14686 5537 aa6.93□□□□□ -1.3
TMEM260-215ENST00000557626 C9orf92A6NGG3 77 aa6.93□□□□□ -1.3
TMEM260-215ENST00000557626 RPS29P62273 56 aaKnown RBP6.93□□□□□ -1.3
TMEM260-215ENST00000557626 MT1FP04733 61 aa6.92□□□□□ -1.3
TMEM260-215ENST00000557626 Q5XG85 94 aa6.92□□□□□ -1.3
TMEM260-215ENST00000557626 TEN1Q86WV5 123 aa6.92□□□□□ -1.3
TMEM260-215ENST00000557626 CCKP06307 115 aa6.91□□□□□ -1.3
TMEM260-215ENST00000557626 KRTAP2-3P0C7H8 128 aa6.91□□□□□ -1.3
TMEM260-215ENST00000557626 ETDBQ3ZM63 59 aa6.91□□□□□ -1.3
TMEM260-215ENST00000557626 KRTAP2-4Q9BYR9 128 aa6.91□□□□□ -1.3
TMEM260-215ENST00000557626 DSCR8Q96T75 97 aa6.9□□□□□ -1.3
TMEM260-215ENST00000557626 MDN1Q9NU22 5596 aa6.88□□□□□ -1.31
TMEM260-215ENST00000557626 A0A087WSZ3 146 aa6.88□□□□□ -1.31
TMEM260-215ENST00000557626 KRTAP10-10P60014 251 aa6.88□□□□□ -1.31
TMEM260-215ENST00000557626 C1orf195Q5TG92 126 aa6.87□□□□□ -1.31
TMEM260-215ENST00000557626 PDE6GP18545 87 aa6.86□□□□□ -1.31
TMEM260-215ENST00000557626 Q96NJ1 140 aa6.86□□□□□ -1.31
TMEM260-215ENST00000557626 VPS25Q9BRG1 176 aa6.86□□□□□ -1.31
TMEM260-215ENST00000557626 KRTAP9-9Q9BYP9 154 aa6.85□□□□□ -1.31
TMEM260-215ENST00000557626 KRTAP9-4Q9BYQ2 154 aa6.85□□□□□ -1.31
TMEM260-215ENST00000557626 LIMD2Q9BT23 127 aa6.84□□□□□ -1.31
TMEM260-215ENST00000557626 LINC00472Q9H8W2 130 aa6.82□□□□□ -1.32
TMEM260-215ENST00000557626 GPR98Q8WXG9 6306 aa6.8□□□□□ -1.32
TMEM260-215ENST00000557626 A0A1B0GW54 56 aa6.79□□□□□ -1.32
TMEM260-215ENST00000557626 RPL37P61927 97 aaKnown RBP6.78□□□□□ -1.32
TMEM260-215ENST00000557626 SS18L2Q9UHA2 77 aa6.78□□□□□ -1.32
TMEM260-215ENST00000557626 DEFB116Q30KQ4 102 aa6.77□□□□□ -1.33
TMEM260-215ENST00000557626 KRTAP4-8A0A0G2JLE6 195 aa6.76□□□□□ -1.33
TMEM260-215ENST00000557626 C21orf62-AS1Q17RA5 79 aa6.75□□□□□ -1.33
TMEM260-215ENST00000557626 Q6ZVQ6 151 aa6.73□□□□□ -1.33
TMEM260-215ENST00000557626 IGKV4-1P06312 121 aa6.71□□□□□ -1.34
TMEM260-215ENST00000557626 NREPQ16612 68 aa6.71□□□□□ -1.34
TMEM260-215ENST00000557626 DSCR10P59022 87 aa6.7□□□□□ -1.34
TMEM260-215ENST00000557626 FAM240AA0A1B0GVK7 77 aa6.69□□□□□ -1.34
TMEM260-215ENST00000557626 NOTCH2NLQ7Z3S9 236 aa6.69□□□□□ -1.34
TMEM260-215ENST00000557626 SIGMAR1Q99720 223 aa6.67□□□□□ -1.34
TMEM260-215ENST00000557626 IGKV3D-7A0A0C4DH55 119 aa6.66□□□□□ -1.34
TMEM260-215ENST00000557626 KRTAP5-9P26371 169 aa6.66□□□□□ -1.34
TMEM260-215ENST00000557626 J3KT08 172 aa6.65□□□□□ -1.34
TMEM260-215ENST00000557626 ACYP1P07311 99 aa6.65□□□□□ -1.34
TMEM260-215ENST00000557626 A0A1B0GVX0 72 aa6.64□□□□□ -1.35
TMEM260-215ENST00000557626 KRTAP16-1A8MUX0 517 aa6.64□□□□□ -1.35
TMEM260-215ENST00000557626 A8MWP4 228 aa6.64□□□□□ -1.35
TMEM260-215ENST00000557626 UBL5Q9BZL1 73 aa6.64□□□□□ -1.35
TMEM260-215ENST00000557626 K7EQZ3 153 aa6.62□□□□□ -1.35
TMEM260-215ENST00000557626 BPY2O14599 106 aa6.62□□□□□ -1.35
TMEM260-215ENST00000557626 Q8N9L7 120 aa6.62□□□□□ -1.35
TMEM260-215ENST00000557626 KRTAP2-2Q9BYT5 123 aa6.62□□□□□ -1.35
TMEM260-215ENST00000557626 KRTAP2-1Q9BYU5 128 aa6.62□□□□□ -1.35
TMEM260-215ENST00000557626 IGHV6-1A0A0B4J1U7 121 aa6.61□□□□□ -1.35
TMEM260-215ENST00000557626 PRR15Q8IV56 129 aa6.61□□□□□ -1.35
TMEM260-215ENST00000557626 C20orf166-AS1Q96NR2 134 aa6.58□□□□□ -1.36
TMEM260-215ENST00000557626 C8orf17Q9NRJ1 99 aa6.58□□□□□ -1.36
TMEM260-215ENST00000557626 MMP24-AS1A0A0U1RRL7 71 aa6.57□□□□□ -1.36
TMEM260-215ENST00000557626 LINC00313P59037 77 aa6.57□□□□□ -1.36
TMEM260-215ENST00000557626 J3QR89 54 aa6.56□□□□□ -1.36
TMEM260-215ENST00000557626 CXCL6P80162 114 aa6.56□□□□□ -1.36
TMEM260-215ENST00000557626 A8MUU9 505 aa6.55□□□□□ -1.36
TMEM260-215ENST00000557626 C8orf87E5RJ46 101 aa6.55□□□□□ -1.36
TMEM260-215ENST00000557626 NDUFB1O75438 58 aa6.55□□□□□ -1.36
TMEM260-215ENST00000557626 LINC00643Q86TS7 51 aa6.55□□□□□ -1.36
TMEM260-215ENST00000557626 LCE1DQ5T752 114 aa6.54□□□□□ -1.36
TMEM260-215ENST00000557626 K7ERU9 68 aa6.53□□□□□ -1.36
TMEM260-215ENST00000557626 ATP11AUNQ6ZP68 121 aa6.52□□□□□ -1.37
TMEM260-215ENST00000557626 KRTAP4-7Q9BYR0 210 aa6.52□□□□□ -1.37
TMEM260-215ENST00000557626 Q75L30 129 aa6.51□□□□□ -1.37
TMEM260-215ENST00000557626 ATP5EP2Q5VTU8 51 aa6.5□□□□□ -1.37
TMEM260-215ENST00000557626 Q8N9P0 234 aaPredicted RBP6.5□□□□□ -1.37
TMEM260-215ENST00000557626 WFDC13Q8IUB5 93 aa6.48□□□□□ -1.37
TMEM260-215ENST00000557626 TMEM254Q8TBM7 123 aa6.48□□□□□ -1.37
TMEM260-215ENST00000557626 FAM236DA0A1B0GTK5 79 aa6.47□□□□□ -1.37
TMEM260-215ENST00000557626 hDV103S1A0JD37 113 aa6.47□□□□□ -1.37
TMEM260-215ENST00000557626 FAM236CP0DP71 79 aa6.47□□□□□ -1.37
TMEM260-215ENST00000557626 A0A087WVE0 104 aa6.46□□□□□ -1.38
TMEM260-215ENST00000557626 HCG22E2RYF7 251 aa6.46□□□□□ -1.38
TMEM260-215ENST00000557626 MT-ATP8P03928 68 aa6.46□□□□□ -1.38
TMEM260-215ENST00000557626 CASC2Q6XLA1 102 aa6.46□□□□□ -1.38
TMEM260-215ENST00000557626 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.38
TMEM260-215ENST00000557626 A6NN06 94 aa6.44□□□□□ -1.38
TMEM260-215ENST00000557626 SPRR2EP22531 72 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms