RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-215ENST00000556839 PTPRZ1P23471 2315 aaPredicted RBP2.78□□□□□ -1.96
RALGAPA1-215ENST00000556839 SPINK13Q1W4C9 94 aa2.78□□□□□ -1.96
RALGAPA1-215ENST00000556839 ITPR3Q14573 2671 aa2.78□□□□□ -1.96
RALGAPA1-215ENST00000556839 AKAP9Q99996 3911 aa2.78□□□□□ -1.96
RALGAPA1-215ENST00000556839 DOPEY2Q9Y3R5 2298 aa2.78□□□□□ -1.96
RALGAPA1-215ENST00000556839 PCNX1Q96RV3 2341 aa2.78□□□□□ -1.97
RALGAPA1-215ENST00000556839 ABCA12Q86UK0 2595 aa2.77□□□□□ -1.97
RALGAPA1-215ENST00000556839 GVQW2A0A096LPI5 108 aaPredicted RBP2.77□□□□□ -1.97
RALGAPA1-215ENST00000556839 H0YAA0 97 aa2.77□□□□□ -1.97
RALGAPA1-215ENST00000556839 BRD3OSQ6XYD6 125 aa2.77□□□□□ -1.97
RALGAPA1-215ENST00000556839 Q6ZRX8 168 aa2.77□□□□□ -1.97
RALGAPA1-215ENST00000556839 VPS13CQ709C8 3753 aa2.77□□□□□ -1.97
RALGAPA1-215ENST00000556839 SPTBN2O15020 2390 aa2.76□□□□□ -1.97
RALGAPA1-215ENST00000556839 INE1O15225 51 aa2.76□□□□□ -1.97
RALGAPA1-215ENST00000556839 COX6B2Q6YFQ2 88 aa2.76□□□□□ -1.97
RALGAPA1-215ENST00000556839 ACACBO00763 2458 aa2.76□□□□□ -1.97
RALGAPA1-215ENST00000556839 CELSR1Q9NYQ6 3014 aa2.76□□□□□ -1.97
RALGAPA1-215ENST00000556839 LRBAP50851 2863 aa2.76□□□□□ -1.97
RALGAPA1-215ENST00000556839 MRPL34Q9BQ48 92 aaKnown RBP2.75□□□□□ -1.97
RALGAPA1-215ENST00000556839 HELZ2Q9BYK8 2649 aaKnown RBP2.75□□□□□ -1.97
RALGAPA1-215ENST00000556839 CEP295Q9C0D2 2601 aa2.75□□□□□ -1.97
RALGAPA1-215ENST00000556839 HECTD1Q9ULT8 2610 aa2.75□□□□□ -1.97
RALGAPA1-215ENST00000556839 C10orf99Q6UWK7 81 aa2.74□□□□□ -1.97
RALGAPA1-215ENST00000556839 PLAC4Q8WY50 150 aa2.74□□□□□ -1.97
RALGAPA1-215ENST00000556839 SPTA1P02549 2419 aa2.74□□□□□ -1.97
RALGAPA1-215ENST00000556839 RIF1Q5UIP0 2472 aaKnown RBP2.73□□□□□ -1.97
RALGAPA1-215ENST00000556839 HIVEP3Q5T1R4 2406 aa2.73□□□□□ -1.97
RALGAPA1-215ENST00000556839 DNAH1Q9P2D7 4330 aa2.73□□□□□ -1.97
RALGAPA1-215ENST00000556839 CLPSL2Q6UWE3 100 aa2.72□□□□□ -1.97
RALGAPA1-215ENST00000556839 CRIPTQ9P021 101 aa2.72□□□□□ -1.97
RALGAPA1-215ENST00000556839 C2CD3Q4AC94 2353 aa2.72□□□□□ -1.97
RALGAPA1-215ENST00000556839 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.72□□□□□ -1.971e-10■■■■■ 29.5
RALGAPA1-215ENST00000556839 NBPF19A0A087WUL8 3843 aa2.71□□□□□ -1.98
RALGAPA1-215ENST00000556839 Q6ZSA8 131 aa2.71□□□□□ -1.98
RALGAPA1-215ENST00000556839 SPTBN1Q01082 2364 aaKnown RBP2.71□□□□□ -1.98
RALGAPA1-215ENST00000556839 SPTAN1Q13813 2472 aaKnown RBP2.7□□□□□ -1.98
RALGAPA1-215ENST00000556839 Q6ZRN7 208 aaPredicted RBP2.69□□□□□ -1.98
RALGAPA1-215ENST00000556839 COL6A6A6NMZ7 2263 aa2.69□□□□□ -1.98
RALGAPA1-215ENST00000556839 FBN2P35556 2912 aa2.69□□□□□ -1.98
RALGAPA1-215ENST00000556839 ITPR1Q14643 2758 aa2.69□□□□□ -1.98
RALGAPA1-215ENST00000556839 IGF2RP11717 2491 aa2.69□□□□□ -1.98
RALGAPA1-215ENST00000556839 MYO9AB2RTY4 2548 aa2.68□□□□□ -1.98
RALGAPA1-215ENST00000556839 COL12A1Q99715 3063 aa2.68□□□□□ -1.98
RALGAPA1-215ENST00000556839 DNHD1Q96M86 4753 aa2.68□□□□□ -1.98
RALGAPA1-215ENST00000556839 NCOR2Q9Y618 2525 aa2.68□□□□□ -1.98
RALGAPA1-215ENST00000556839 CREBBPQ92793 2442 aa2.68□□□□□ -1.98
RALGAPA1-215ENST00000556839 AKAP6Q13023 2319 aa2.68□□□□□ -1.98
RALGAPA1-215ENST00000556839 H1FX-AS1Q4G0G2 97 aa2.68□□□□□ -1.98
RALGAPA1-215ENST00000556839 DEFB136Q30KP8 78 aa2.67□□□□□ -1.98
RALGAPA1-215ENST00000556839 IGFL1Q6UW32 110 aa2.67□□□□□ -1.98
RALGAPA1-215ENST00000556839 CFAP46Q8IYW2 2715 aa2.67□□□□□ -1.98
RALGAPA1-215ENST00000556839 CELSR2Q9HCU4 2923 aa2.66□□□□□ -1.98
RALGAPA1-215ENST00000556839 SETD2Q9BYW2 2564 aaPredicted RBP2.66□□□□□ -1.98
RALGAPA1-215ENST00000556839 SPRR1AP35321 89 aa2.66□□□□□ -1.98
RALGAPA1-215ENST00000556839 MXRA5Q9NR99 2828 aa2.65□□□□□ -1.98
RALGAPA1-215ENST00000556839 NBASA2RRP1 2371 aa2.65□□□□□ -1.99
RALGAPA1-215ENST00000556839 KRTAP10-10P60014 251 aa2.65□□□□□ -1.99
RALGAPA1-215ENST00000556839 DEFB105AQ8NG35 78 aa2.65□□□□□ -1.99
RALGAPA1-215ENST00000556839 NOP10Q9NPE3 64 aaKnown RBP2.65□□□□□ -1.99
RALGAPA1-215ENST00000556839 ZNF469Q96JG9 3925 aaPredicted RBP2.64□□□□□ -1.99
RALGAPA1-215ENST00000556839 HTN1P15515 57 aa2.64□□□□□ -1.99
RALGAPA1-215ENST00000556839 PRO0255Q9UI72 69 aa2.64□□□□□ -1.99
RALGAPA1-215ENST00000556839 CSPG4Q6UVK1 2322 aa2.63□□□□□ -1.99
RALGAPA1-215ENST00000556839 TEX15Q9BXT5 2789 aa2.63□□□□□ -1.99
RALGAPA1-215ENST00000556839 RPL37P61927 97 aaKnown RBP2.63□□□□□ -1.99
RALGAPA1-215ENST00000556839 UBR5O95071 2799 aaPredicted RBP2.63□□□□□ -1.99
RALGAPA1-215ENST00000556839 ZFYVE26Q68DK2 2539 aa2.62□□□□□ -1.99
RALGAPA1-215ENST00000556839 CSMD2Q7Z408 3487 aa2.62□□□□□ -1.99
RALGAPA1-215ENST00000556839 ZANQ9Y493 2812 aa2.62□□□□□ -1.99
RALGAPA1-215ENST00000556839 CRYBG3Q68DQ2 2970 aa2.62□□□□□ -1.99
RALGAPA1-215ENST00000556839 USP9YO00507 2555 aaPredicted RBP2.62□□□□□ -1.99
RALGAPA1-215ENST00000556839 DNAH3Q8TD57 4116 aa2.62□□□□□ -1.99
RALGAPA1-215ENST00000556839 KRTAP13-2Q52LG2 175 aa2.62□□□□□ -1.99
RALGAPA1-215ENST00000556839 H3BNG1 76 aa2.61□□□□□ -1.99
RALGAPA1-215ENST00000556839 DEFB130BP0DP73 79 aa2.61□□□□□ -1.99
RALGAPA1-215ENST00000556839 DEFB130AP0DP74 79 aa2.61□□□□□ -1.99
RALGAPA1-215ENST00000556839 UNQ6190/PRO20217Q6UXQ8 127 aa2.61□□□□□ -1.99
RALGAPA1-215ENST00000556839 SPG11Q96JI7 2443 aa2.6□□□□□ -1.99
RALGAPA1-215ENST00000556839 LELP1Q5T871 98 aa2.6□□□□□ -1.99
RALGAPA1-215ENST00000556839 FLNCQ14315 2725 aa2.6□□□□□ -1.99
RALGAPA1-215ENST00000556839 DYNC2H1Q8NCM8 4307 aaKnown RBP2.6□□□□□ -1.99
RALGAPA1-215ENST00000556839 POLQO75417 2590 aa2.59□□□□□ -1.99
RALGAPA1-215ENST00000556839 SPRR1BP22528 89 aa2.59□□□□□ -2
RALGAPA1-215ENST00000556839 C10orf95Q9H7T3 257 aa2.59□□□□□ -2
RALGAPA1-215ENST00000556839 WNK1Q9H4A3 2382 aa2.59□□□□□ -2
RALGAPA1-215ENST00000556839 TENM4Q6N022 2769 aa2.58□□□□□ -2
RALGAPA1-215ENST00000556839 IGSF10Q6WRI0 2623 aa2.58□□□□□ -2
RALGAPA1-215ENST00000556839 UBE2DNLQ8IWF7 75 aa2.58□□□□□ -2
RALGAPA1-215ENST00000556839 MAP1AP78559 2803 aaPredicted RBP2.58□□□□□ -2
RALGAPA1-215ENST00000556839 K7EIL1 84 aa2.57□□□□□ -2
RALGAPA1-215ENST00000556839 CMYA5Q8N3K9 4069 aa2.56□□□□□ -2
RALGAPA1-215ENST00000556839 A0A096LPF7 62 aa2.56□□□□□ -2
RALGAPA1-215ENST00000556839 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
RALGAPA1-215ENST00000556839 CUBNO60494 3623 aa2.56□□□□□ -2
RALGAPA1-215ENST00000556839 HUWE1Q7Z6Z7 4374 aaKnown RBP2.55□□□□□ -2
RALGAPA1-215ENST00000556839 UTP20O75691 2785 aaKnown RBP2.55□□□□□ -2
RALGAPA1-215ENST00000556839 APCP25054 2843 aa2.55□□□□□ -2
RALGAPA1-215ENST00000556839 TLN2Q9Y4G6 2542 aa2.55□□□□□ -2
RALGAPA1-215ENST00000556839 NIPBLQ6KC79 2804 aaeCLIP2.54□□□□□ -2
RALGAPA1-215ENST00000556839 ANK2Q01484 3957 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms