RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 SPRR1BP22528 89 aa4.31□□□□□ -1.72
HNRNPC-226ENST00000556628 SEC61BP60468 96 aaKnown RBP4.31□□□□□ -1.72
HNRNPC-226ENST00000556628 MUC2Q02817 5179 aa4.31□□□□□ -1.72
HNRNPC-226ENST00000556628 PDE6GP18545 87 aa4.3□□□□□ -1.72
HNRNPC-226ENST00000556628 RBM3P98179 157 aaKnown RBP4.3□□□□□ -1.72
HNRNPC-226ENST00000556628 ASB16-AS1Q495Z4 193 aa4.3□□□□□ -1.72
HNRNPC-226ENST00000556628 HRCT1Q6UXD1 115 aa4.3□□□□□ -1.72
HNRNPC-226ENST00000556628 DEFB105AQ8NG35 78 aa4.3□□□□□ -1.72
HNRNPC-226ENST00000556628 C14orf132Q9NPU4 83 aa4.3□□□□□ -1.72
HNRNPC-226ENST00000556628 NDUFV3P56181 108 aaKnown RBP4.29□□□□□ -1.72
HNRNPC-226ENST00000556628 IGLV5-48A0A075B6I7 105 aa4.28□□□□□ -1.72
HNRNPC-226ENST00000556628 LOC110117498A0A087WWA1 95 aa4.28□□□□□ -1.72
HNRNPC-226ENST00000556628 CCKP06307 115 aa4.28□□□□□ -1.72
HNRNPC-226ENST00000556628 DSCR8Q96T75 97 aa4.28□□□□□ -1.72
HNRNPC-226ENST00000556628 SIGMAR1Q99720 223 aa4.28□□□□□ -1.72
HNRNPC-226ENST00000556628 MUC17Q685J3 4493 aa4.27□□□□□ -1.73
HNRNPC-226ENST00000556628 LINC01547P58512 204 aaPredicted RBP4.26□□□□□ -1.73
HNRNPC-226ENST00000556628 CD164Q04900 197 aa4.26□□□□□ -1.73
HNRNPC-226ENST00000556628 TRBV7-4A0A0J9YYF1 115 aa4.25□□□□□ -1.73
HNRNPC-226ENST00000556628 A0A1B0GV72 72 aa4.25□□□□□ -1.73
HNRNPC-226ENST00000556628 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
HNRNPC-226ENST00000556628 Q6ZQT0 140 aa4.25□□□□□ -1.73
HNRNPC-226ENST00000556628 LINC00643Q86TS7 51 aa4.24□□□□□ -1.73
HNRNPC-226ENST00000556628 A0A1B0GW54 56 aa4.23□□□□□ -1.73
HNRNPC-226ENST00000556628 C9orf92A6NGG3 77 aa4.23□□□□□ -1.73
HNRNPC-226ENST00000556628 F8WEM9 126 aa4.23□□□□□ -1.73
HNRNPC-226ENST00000556628 SMIM29Q86T20 159 aa4.23□□□□□ -1.73
HNRNPC-226ENST00000556628 IGKV2-30P06310 120 aa4.22□□□□□ -1.73
HNRNPC-226ENST00000556628 SCGB1A1P11684 91 aa4.22□□□□□ -1.73
HNRNPC-226ENST00000556628 UBL5Q9BZL1 73 aa4.22□□□□□ -1.73
HNRNPC-226ENST00000556628 LINC00846Q9NV44 126 aa4.22□□□□□ -1.73
HNRNPC-226ENST00000556628 MT-ATP8P03928 68 aa4.21□□□□□ -1.74
HNRNPC-226ENST00000556628 Q5XG85 94 aa4.21□□□□□ -1.74
HNRNPC-226ENST00000556628 KRTAP4-1Q9BYQ7 146 aa4.21□□□□□ -1.74
HNRNPC-226ENST00000556628 ATP5EP2Q5VTU8 51 aa4.2□□□□□ -1.74
HNRNPC-226ENST00000556628 Q6JHZ5 121 aa4.2□□□□□ -1.74
HNRNPC-226ENST00000556628 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
HNRNPC-226ENST00000556628 Q6Q795 121 aa4.2□□□□□ -1.74
HNRNPC-226ENST00000556628 IMUPQ9GZP8 106 aa4.2□□□□□ -1.74
HNRNPC-226ENST00000556628 FAT4Q6V0I7 4981 aa4.19□□□□□ -1.74
HNRNPC-226ENST00000556628 IGLV8-61A0A075B6I0 122 aa4.19□□□□□ -1.74
HNRNPC-226ENST00000556628 TRBV7-7A0A0K0K1E9 115 aa4.19□□□□□ -1.74
HNRNPC-226ENST00000556628 C1orf195Q5TG92 126 aa4.19□□□□□ -1.74
HNRNPC-226ENST00000556628 A0A0G2JQZ4 141 aa4.18□□□□□ -1.74
HNRNPC-226ENST00000556628 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
HNRNPC-226ENST00000556628 PCOTHQ58A44 107 aa4.18□□□□□ -1.74
HNRNPC-226ENST00000556628 Q8N9P0 234 aaPredicted RBP4.18□□□□□ -1.74
HNRNPC-226ENST00000556628 CXCL6P80162 114 aa4.16□□□□□ -1.74
HNRNPC-226ENST00000556628 Q6ZVQ6 151 aa4.16□□□□□ -1.74
HNRNPC-226ENST00000556628 A0A1W2PNM2 257 aa4.15□□□□□ -1.75
HNRNPC-226ENST00000556628 NREPQ16612 68 aa4.15□□□□□ -1.75
HNRNPC-226ENST00000556628 IGFL1Q6UW32 110 aa4.15□□□□□ -1.75
HNRNPC-226ENST00000556628 IGKV3D-7A0A0C4DH55 119 aa4.14□□□□□ -1.75
HNRNPC-226ENST00000556628 RPL37P61927 97 aaKnown RBP4.14□□□□□ -1.75
HNRNPC-226ENST00000556628 HIST1H4AP62805 103 aaKnown RBP4.12□□□□□ -1.75
HNRNPC-226ENST00000556628 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
HNRNPC-226ENST00000556628 BPY2O14599 106 aa4.11□□□□□ -1.75
HNRNPC-226ENST00000556628 SS18L2Q9UHA2 77 aa4.11□□□□□ -1.75
HNRNPC-226ENST00000556628 KRTAP10-6P60371 365 aaPredicted RBP4.1□□□□□ -1.75
HNRNPC-226ENST00000556628 COX6B2Q6YFQ2 88 aa4.1□□□□□ -1.75
HNRNPC-226ENST00000556628 A0A087WSZ3 146 aa4.09□□□□□ -1.75
HNRNPC-226ENST00000556628 FAM236AA0A1B0GUQ0 79 aa4.09□□□□□ -1.75
HNRNPC-226ENST00000556628 FAM236BA0A1B0GV22 79 aa4.09□□□□□ -1.75
HNRNPC-226ENST00000556628 ANAPC13Q9BS18 74 aa4.09□□□□□ -1.75
HNRNPC-226ENST00000556628 M0R2T5 61 aa4.08□□□□□ -1.76
HNRNPC-226ENST00000556628 ATOX1O00244 68 aa4.08□□□□□ -1.76
HNRNPC-226ENST00000556628 ATP11AUNQ6ZP68 121 aa4.08□□□□□ -1.76
HNRNPC-226ENST00000556628 MT1HP80294 61 aa4.07□□□□□ -1.76
HNRNPC-226ENST00000556628 KRTAP19-2Q3LHN2 52 aa4.07□□□□□ -1.76
HNRNPC-226ENST00000556628 A0A087WVE0 104 aa4.06□□□□□ -1.76
HNRNPC-226ENST00000556628 J3KT08 172 aa4.06□□□□□ -1.76
HNRNPC-226ENST00000556628 Q75L30 129 aa4.06□□□□□ -1.76
HNRNPC-226ENST00000556628 Q96NJ1 140 aa4.06□□□□□ -1.76
HNRNPC-226ENST00000556628 IGKV4-1P06312 121 aa4.05□□□□□ -1.76
HNRNPC-226ENST00000556628 DSCR10P59022 87 aa4.04□□□□□ -1.76
HNRNPC-226ENST00000556628 SMIM20Q8N5G0 67 aa4.04□□□□□ -1.76
HNRNPC-226ENST00000556628 LINC00472Q9H8W2 130 aa4.04□□□□□ -1.76
HNRNPC-226ENST00000556628 IGKV2D-30A0A075B6S6 120 aa4.02□□□□□ -1.77
HNRNPC-226ENST00000556628 A8MWP4 228 aa4.02□□□□□ -1.77
HNRNPC-226ENST00000556628 NDUFB1O75438 58 aa4.02□□□□□ -1.77
HNRNPC-226ENST00000556628 SERP2Q8N6R1 65 aa4.02□□□□□ -1.77
HNRNPC-226ENST00000556628 Q8N9L7 120 aa4.02□□□□□ -1.77
HNRNPC-226ENST00000556628 K7EQZ3 153 aa4.01□□□□□ -1.77
HNRNPC-226ENST00000556628 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
HNRNPC-226ENST00000556628 HCG22E2RYF7 251 aa4□□□□□ -1.77
HNRNPC-226ENST00000556628 UQCRQO14949 82 aa4□□□□□ -1.77
HNRNPC-226ENST00000556628 COX7CP15954 63 aa4□□□□□ -1.77
HNRNPC-226ENST00000556628 DEFB116Q30KQ4 102 aa4□□□□□ -1.77
HNRNPC-226ENST00000556628 PRR15Q8IV56 129 aa4□□□□□ -1.77
HNRNPC-226ENST00000556628 C20orf166-AS1Q96NR2 134 aa4□□□□□ -1.77
HNRNPC-226ENST00000556628 TRAV7A0A075B6U4 112 aa3.99□□□□□ -1.77
HNRNPC-226ENST00000556628 A8MUU9 505 aa3.99□□□□□ -1.77
HNRNPC-226ENST00000556628 LINC00313P59037 77 aa3.99□□□□□ -1.77
HNRNPC-226ENST00000556628 CRCT1Q9UGL9 99 aa3.99□□□□□ -1.77
HNRNPC-226ENST00000556628 A0A1B0GVX0 72 aa3.96□□□□□ -1.78
HNRNPC-226ENST00000556628 CCDC179H3BU77 68 aa3.96□□□□□ -1.78
HNRNPC-226ENST00000556628 CASC2Q6XLA1 102 aa3.96□□□□□ -1.78
HNRNPC-226ENST00000556628 OCR1Q9BZK8 76 aa3.96□□□□□ -1.78
HNRNPC-226ENST00000556628 WFDC13Q8IUB5 93 aa3.95□□□□□ -1.78
HNRNPC-226ENST00000556628 IGHV6-1A0A0B4J1U7 121 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms