RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 CAMK2N2Q96S95 79 aa2.46□□□□□ -2.02
ATXN3-240ENST00000556339 DHRS4-AS1Q9P1J3 65 aa2.46□□□□□ -2.02
ATXN3-240ENST00000556339 C6orf48Q9UBA6 75 aa2.46□□□□□ -2.02
ATXN3-240ENST00000556339 HMCN2Q8NDA2 5059 aa2.46□□□□□ -2.02
ATXN3-240ENST00000556339 A0A087WVE0 104 aa2.45□□□□□ -2.02
ATXN3-240ENST00000556339 CHTF8P0CG12 524 aa2.45□□□□□ -2.02
ATXN3-240ENST00000556339 CNBPP62633 177 aaKnown RBP2.45□□□□□ -2.02
ATXN3-240ENST00000556339 C9orf116Q5BN46 136 aaPredicted RBP2.45□□□□□ -2.02
ATXN3-240ENST00000556339 KRTAP26-1Q6PEX3 210 aa2.45□□□□□ -2.02
ATXN3-240ENST00000556339 KCNQ1DNQ9H478 68 aa2.45□□□□□ -2.02
ATXN3-240ENST00000556339 PKIGQ9Y2B9 76 aa2.45□□□□□ -2.02
ATXN3-240ENST00000556339 SERP1Q9Y6X1 66 aa2.45□□□□□ -2.02
ATXN3-240ENST00000556339 IGLV5-48A0A075B6I7 105 aa2.44□□□□□ -2.02
ATXN3-240ENST00000556339 FAM236DA0A1B0GTK5 79 aa2.44□□□□□ -2.02
ATXN3-240ENST00000556339 PANO1I0J062 215 aa2.44□□□□□ -2.02
ATXN3-240ENST00000556339 FAM236CP0DP71 79 aa2.44□□□□□ -2.02
ATXN3-240ENST00000556339 NREPQ16612 68 aa2.44□□□□□ -2.02
ATXN3-240ENST00000556339 Q75L30 129 aa2.44□□□□□ -2.02
ATXN3-240ENST00000556339 FAM19A5Q7Z5A7 132 aaPredicted RBP2.44□□□□□ -2.02
ATXN3-240ENST00000556339 FAM19A1Q7Z5A9 133 aa2.44□□□□□ -2.02
ATXN3-240ENST00000556339 Q8NDZ9 215 aa2.44□□□□□ -2.02
ATXN3-240ENST00000556339 LINC00474Q9P2X8 69 aa2.44□□□□□ -2.02
ATXN3-240ENST00000556339 H7BZZ5 65 aa2.43□□□□□ -2.02
ATXN3-240ENST00000556339 KRTAP10-4P60372 401 aaPredicted RBP2.43□□□□□ -2.02
ATXN3-240ENST00000556339 SYCNQ0VAF6 134 aa2.43□□□□□ -2.02
ATXN3-240ENST00000556339 REG3GQ6UW15 175 aa2.43□□□□□ -2.02
ATXN3-240ENST00000556339 C20orf197Q8N268 126 aa2.43□□□□□ -2.02
ATXN3-240ENST00000556339 NKAPP1Q8N9T2 125 aa2.43□□□□□ -2.02
ATXN3-240ENST00000556339 SPACA4Q8TDM5 124 aa2.43□□□□□ -2.02
ATXN3-240ENST00000556339 PLAC8Q9NZF1 115 aa2.43□□□□□ -2.02
ATXN3-240ENST00000556339 PKHD1L1Q86WI1 4243 aa2.43□□□□□ -2.02
ATXN3-240ENST00000556339 LRP1Q07954 4544 aaKnown RBP2.43□□□□□ -2.02
ATXN3-240ENST00000556339 SMIM26A0A096LP01 95 aa2.42□□□□□ -2.02
ATXN3-240ENST00000556339 RPL37AP8A6NKH3 93 aa2.42□□□□□ -2.02
ATXN3-240ENST00000556339 BPY2O14599 106 aa2.42□□□□□ -2.02
ATXN3-240ENST00000556339 SPRR1AP35321 89 aa2.42□□□□□ -2.02
ATXN3-240ENST00000556339 Q6ZRP5 223 aa2.42□□□□□ -2.02
ATXN3-240ENST00000556339 C15orf56Q8N910 161 aa2.42□□□□□ -2.02
ATXN3-240ENST00000556339 FAT3Q8TDW7 4589 aa2.42□□□□□ -2.02
ATXN3-240ENST00000556339 A0A096LNI7 61 aa2.41□□□□□ -2.02
ATXN3-240ENST00000556339 SPINK6Q6UWN8 80 aa2.41□□□□□ -2.02
ATXN3-240ENST00000556339 TMEM254Q8TBM7 123 aa2.41□□□□□ -2.02
ATXN3-240ENST00000556339 SPRR4Q96PI1 79 aa2.41□□□□□ -2.02
ATXN3-240ENST00000556339 XAGE1AQ9HD64 81 aa2.41□□□□□ -2.02
ATXN3-240ENST00000556339 IGLV1-50A0A075B6I6 118 aa2.4□□□□□ -2.03
ATXN3-240ENST00000556339 IGLV9-49A0A0B4J1Y8 123 aa2.4□□□□□ -2.03
ATXN3-240ENST00000556339 ETDCA0A1B0GVM5 59 aa2.4□□□□□ -2.03
ATXN3-240ENST00000556339 KRTAP4-16G5E9R7 235 aaPredicted RBP2.4□□□□□ -2.03
ATXN3-240ENST00000556339 Q6ZRX8 168 aa2.4□□□□□ -2.03
ATXN3-240ENST00000556339 OCR1Q9BZK8 76 aa2.4□□□□□ -2.03
ATXN3-240ENST00000556339 CYSTM1Q9H1C7 97 aa2.4□□□□□ -2.03
ATXN3-240ENST00000556339 RNF213Q63HN8 5207 aa2.39□□□□□ -2.03
ATXN3-240ENST00000556339 IGLV8-61A0A075B6I0 122 aa2.39□□□□□ -2.03
ATXN3-240ENST00000556339 A0A0U1RQV1 116 aa2.39□□□□□ -2.03
ATXN3-240ENST00000556339 NDUFB1O75438 58 aa2.39□□□□□ -2.03
ATXN3-240ENST00000556339 IGKV4-1P06312 121 aa2.39□□□□□ -2.03
ATXN3-240ENST00000556339 MT1HL1P0DM35 61 aa2.39□□□□□ -2.03
ATXN3-240ENST00000556339 C1orf137Q5JT78 98 aa2.39□□□□□ -2.03
ATXN3-240ENST00000556339 Q8N377 158 aa2.39□□□□□ -2.03
ATXN3-240ENST00000556339 Q8NBF4 154 aa2.39□□□□□ -2.03
ATXN3-240ENST00000556339 A0A1W2PNN7 141 aa2.38□□□□□ -2.03
ATXN3-240ENST00000556339 F8WEM9 126 aa2.38□□□□□ -2.03
ATXN3-240ENST00000556339 H0Y9J4 135 aa2.38□□□□□ -2.03
ATXN3-240ENST00000556339 H3BPC8 53 aa2.38□□□□□ -2.03
ATXN3-240ENST00000556339 UBE2BP63146 152 aa2.38□□□□□ -2.03
ATXN3-240ENST00000556339 Q5XG85 94 aa2.38□□□□□ -2.03
ATXN3-240ENST00000556339 PHF5AQ7RTV0 110 aaKnown RBP2.38□□□□□ -2.03
ATXN3-240ENST00000556339 MRPL55Q7Z7F7 128 aaKnown RBP2.38□□□□□ -2.03
ATXN3-240ENST00000556339 A0A1W2PNM2 257 aa2.37□□□□□ -2.03
ATXN3-240ENST00000556339 PSORS1C2Q9UIG4 136 aa2.37□□□□□ -2.03
ATXN3-240ENST00000556339 KRTAP1-4P0C5Y4 121 aa2.36□□□□□ -2.03
ATXN3-240ENST00000556339 SPRR1BP22528 89 aa2.36□□□□□ -2.03
ATXN3-240ENST00000556339 PRR4Q16378 134 aa2.36□□□□□ -2.03
ATXN3-240ENST00000556339 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
ATXN3-240ENST00000556339 Q9BRP9 147 aa2.36□□□□□ -2.03
ATXN3-240ENST00000556339 CYP4F30PQ9H0H9 118 aa2.36□□□□□ -2.03
ATXN3-240ENST00000556339 PRO0628Q9UI54 55 aa2.36□□□□□ -2.03
ATXN3-240ENST00000556339 SNURFQ9Y675 71 aa2.36□□□□□ -2.03
ATXN3-240ENST00000556339 V9GYY9 64 aa2.36□□□□□ -2.03
ATXN3-240ENST00000556339 FAM168BA1KXE4 195 aa2.35□□□□□ -2.03
ATXN3-240ENST00000556339 HCG22E2RYF7 251 aa2.35□□□□□ -2.03
ATXN3-240ENST00000556339 IGLV7-43P04211 117 aa2.35□□□□□ -2.03
ATXN3-240ENST00000556339 C4orf26Q17RF5 130 aa2.35□□□□□ -2.03
ATXN3-240ENST00000556339 DEFB105AQ8NG35 78 aa2.35□□□□□ -2.03
ATXN3-240ENST00000556339 ZCCHC13Q8WW36 166 aaKnown RBP2.35□□□□□ -2.03
ATXN3-240ENST00000556339 LRP2P98164 4655 aa2.34□□□□□ -2.03
ATXN3-240ENST00000556339 TNXBP22105 4242 aa2.34□□□□□ -2.03
ATXN3-240ENST00000556339 hDV103S1A0JD37 113 aa2.34□□□□□ -2.03
ATXN3-240ENST00000556339 MP68P56378 58 aa2.34□□□□□ -2.03
ATXN3-240ENST00000556339 HRCT1Q6UXD1 115 aa2.34□□□□□ -2.03
ATXN3-240ENST00000556339 SPANXA2-OT1Q8N9U9 137 aa2.34□□□□□ -2.03
ATXN3-240ENST00000556339 Q1T7F1 81 aa2.33□□□□□ -2.04
ATXN3-240ENST00000556339 FP248Q71RG6 208 aaPredicted RBP2.33□□□□□ -2.04
ATXN3-240ENST00000556339 C1orf195Q5TG92 126 aa2.32□□□□□ -2.04
ATXN3-240ENST00000556339 IGFL1Q6UW32 110 aa2.32□□□□□ -2.04
ATXN3-240ENST00000556339 Q8N9L7 120 aa2.32□□□□□ -2.04
ATXN3-240ENST00000556339 HIGD2AQ9BW72 106 aa2.32□□□□□ -2.04
ATXN3-240ENST00000556339 TP53AIP1Q9HCN2 124 aa2.32□□□□□ -2.04
ATXN3-240ENST00000556339 A8MWP4 228 aa2.31□□□□□ -2.04
ATXN3-240ENST00000556339 K7EQZ3 153 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms