RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 H7C2G1 150 aa2.63□□□□□ -1.99
ATXN3-239ENST00000556315 RPS29P62273 56 aaKnown RBP2.63□□□□□ -1.99
ATXN3-239ENST00000556315 CXCL6P80162 114 aa2.63□□□□□ -1.99
ATXN3-239ENST00000556315 PCOTHQ58A44 107 aa2.63□□□□□ -1.99
ATXN3-239ENST00000556315 SPRR4Q96PI1 79 aa2.63□□□□□ -1.99
ATXN3-239ENST00000556315 TMEM126AQ9H061 195 aa2.63□□□□□ -1.99
ATXN3-239ENST00000556315 M0R378 163 aa2.62□□□□□ -1.99
ATXN3-239ENST00000556315 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
ATXN3-239ENST00000556315 LCE3AQ5TA76 89 aa2.62□□□□□ -1.99
ATXN3-239ENST00000556315 HIGD2AQ9BW72 106 aa2.62□□□□□ -1.99
ATXN3-239ENST00000556315 ZNF706Q9Y5V0 76 aaPredicted RBP2.62□□□□□ -1.99
ATXN3-239ENST00000556315 NDUFC2O95298 119 aa2.61□□□□□ -1.99
ATXN3-239ENST00000556315 DNAL4O96015 105 aa2.61□□□□□ -1.99
ATXN3-239ENST00000556315 BAALC-AS2P0C853 105 aa2.61□□□□□ -1.99
ATXN3-239ENST00000556315 COX17Q14061 63 aa2.61□□□□□ -1.99
ATXN3-239ENST00000556315 S100A7L2Q5SY68 101 aa2.61□□□□□ -1.99
ATXN3-239ENST00000556315 SSBP3-AS1Q7Z2R9 100 aa2.61□□□□□ -1.99
ATXN3-239ENST00000556315 COX7B2Q8TF08 81 aa2.61□□□□□ -1.99
ATXN3-239ENST00000556315 OBSCN-AS1Q96MR7 158 aa2.61□□□□□ -1.99
ATXN3-239ENST00000556315 JMJD7-PLA2G4BH0Y9G9 81 aa2.6□□□□□ -1.99
ATXN3-239ENST00000556315 COX6B2Q6YFQ2 88 aa2.6□□□□□ -1.99
ATXN3-239ENST00000556315 CLEC2BQ92478 149 aa2.6□□□□□ -1.99
ATXN3-239ENST00000556315 SND1-IT1Q9HBX3 110 aa2.6□□□□□ -1.99
ATXN3-239ENST00000556315 A8MU10 97 aa2.59□□□□□ -1.99
ATXN3-239ENST00000556315 ATOX1O00244 68 aa2.59□□□□□ -1.99
ATXN3-239ENST00000556315 UQCRQO14949 82 aa2.59□□□□□ -1.99
ATXN3-239ENST00000556315 ATP5EP2Q5VTU8 51 aa2.59□□□□□ -1.99
ATXN3-239ENST00000556315 SOSTDC1Q6X4U4 206 aa2.59□□□□□ -1.99
ATXN3-239ENST00000556315 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
ATXN3-239ENST00000556315 SMCR5Q8TEV8 140 aa2.59□□□□□ -1.99
ATXN3-239ENST00000556315 TRBV10-3A0A0K0K1G6 114 aa2.58□□□□□ -2
ATXN3-239ENST00000556315 TMEM256-PLSCR3K7ERE1 68 aa2.58□□□□□ -2
ATXN3-239ENST00000556315 LINC00158P58513 81 aa2.58□□□□□ -2
ATXN3-239ENST00000556315 LINC00483Q53H64 154 aa2.58□□□□□ -2
ATXN3-239ENST00000556315 Q6JHZ5 121 aa2.58□□□□□ -2
ATXN3-239ENST00000556315 MIR7-3HGQ8N6C7 128 aa2.58□□□□□ -2
ATXN3-239ENST00000556315 ORMDL1Q9P0S3 153 aa2.58□□□□□ -2
ATXN3-239ENST00000556315 SSPOA2VEC9 5147 aa2.58□□□□□ -2
ATXN3-239ENST00000556315 KRTAP4-16G5E9R7 235 aaPredicted RBP2.57□□□□□ -2
ATXN3-239ENST00000556315 PDE6GP18545 87 aa2.57□□□□□ -2
ATXN3-239ENST00000556315 PFN2P35080 140 aa2.57□□□□□ -2
ATXN3-239ENST00000556315 NPC2P61916 151 aa2.57□□□□□ -2
ATXN3-239ENST00000556315 HIST1H4AP62805 103 aaKnown RBP2.57□□□□□ -2
ATXN3-239ENST00000556315 RPS28P62857 69 aaKnown RBP2.57□□□□□ -2
ATXN3-239ENST00000556315 MOBPQ13875 183 aa2.57□□□□□ -2
ATXN3-239ENST00000556315 SMIM11BQ8TCY0 68 aa2.57□□□□□ -2
ATXN3-239ENST00000556315 FAM236AA0A1B0GUQ0 79 aa2.56□□□□□ -2
ATXN3-239ENST00000556315 FAM236BA0A1B0GV22 79 aa2.56□□□□□ -2
ATXN3-239ENST00000556315 CCDC179H3BU77 68 aa2.56□□□□□ -2
ATXN3-239ENST00000556315 CCKP06307 115 aa2.56□□□□□ -2
ATXN3-239ENST00000556315 COX7CP15954 63 aa2.56□□□□□ -2
ATXN3-239ENST00000556315 USH2AO75445 5202 aa2.55□□□□□ -2
ATXN3-239ENST00000556315 TRBV7-6A0A0J9YX20 115 aa2.55□□□□□ -2
ATXN3-239ENST00000556315 C9orf92A6NGG3 77 aa2.55□□□□□ -2
ATXN3-239ENST00000556315 SMIM20Q8N5G0 67 aa2.55□□□□□ -2
ATXN3-239ENST00000556315 Q8NDZ9 215 aa2.55□□□□□ -2
ATXN3-239ENST00000556315 OR13C6PQ8NH95 151 aa2.55□□□□□ -2
ATXN3-239ENST00000556315 FCGBPQ9Y6R7 5405 aaPredicted RBP2.54□□□□□ -2
ATXN3-239ENST00000556315 LOC110117498A0A087WWA1 95 aa2.54□□□□□ -2
ATXN3-239ENST00000556315 ETDCA0A1B0GVM5 59 aa2.54□□□□□ -2
ATXN3-239ENST00000556315 hADV29S1A0JD25 119 aa2.54□□□□□ -2
ATXN3-239ENST00000556315 IGLV6-57P01721 117 aa2.54□□□□□ -2
ATXN3-239ENST00000556315 SPRR1AP35321 89 aa2.54□□□□□ -2
ATXN3-239ENST00000556315 C9orf153Q5TBE3 101 aa2.54□□□□□ -2
ATXN3-239ENST00000556315 SERP2Q8N6R1 65 aa2.54□□□□□ -2
ATXN3-239ENST00000556315 UBL5Q9BZL1 73 aa2.54□□□□□ -2
ATXN3-239ENST00000556315 KCNQ1DNQ9H478 68 aa2.54□□□□□ -2
ATXN3-239ENST00000556315 SS18L2Q9UHA2 77 aa2.54□□□□□ -2
ATXN3-239ENST00000556315 A0A1B0GW54 56 aa2.53□□□□□ -2
ATXN3-239ENST00000556315 TMEM258P61165 79 aa2.53□□□□□ -2
ATXN3-239ENST00000556315 LINC00575Q6W349 94 aa2.53□□□□□ -2
ATXN3-239ENST00000556315 LIMD2Q9BT23 127 aa2.53□□□□□ -2
ATXN3-239ENST00000556315 FLGP20930 4061 aaPredicted RBP2.53□□□□□ -2
ATXN3-239ENST00000556315 J3KT08 172 aa2.52□□□□□ -2.01
ATXN3-239ENST00000556315 ERC2-IT1O76042 136 aa2.52□□□□□ -2.01
ATXN3-239ENST00000556315 KRTAP12-2P59991 146 aa2.52□□□□□ -2.01
ATXN3-239ENST00000556315 RPL37P61927 97 aaKnown RBP2.52□□□□□ -2.01
ATXN3-239ENST00000556315 RBM3P98179 157 aaKnown RBP2.52□□□□□ -2.01
ATXN3-239ENST00000556315 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.52□□□□□ -2.01
ATXN3-239ENST00000556315 C14orf132Q9NPU4 83 aa2.52□□□□□ -2.01
ATXN3-239ENST00000556315 LINC00846Q9NV44 126 aa2.52□□□□□ -2.01
ATXN3-239ENST00000556315 DSCR8Q96T75 97 aa2.51□□□□□ -2.01
ATXN3-239ENST00000556315 NCR3O14931 201 aa2.5□□□□□ -2.01
ATXN3-239ENST00000556315 NDUFC1O43677 76 aa2.5□□□□□ -2.01
ATXN3-239ENST00000556315 C6orf99Q4VX62 202 aa2.5□□□□□ -2.01
ATXN3-239ENST00000556315 Q6ZQT0 140 aa2.5□□□□□ -2.01
ATXN3-239ENST00000556315 TRAV7A0A075B6U4 112 aa2.49□□□□□ -2.01
ATXN3-239ENST00000556315 ATP5EP56381 51 aaPredicted RBP2.49□□□□□ -2.01
ATXN3-239ENST00000556315 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
ATXN3-239ENST00000556315 HRCT1Q6UXD1 115 aa2.49□□□□□ -2.01
ATXN3-239ENST00000556315 Q9BRP9 147 aa2.49□□□□□ -2.01
ATXN3-239ENST00000556315 TRAV23DV6A0A075B6W5 121 aa2.48□□□□□ -2.01
ATXN3-239ENST00000556315 IGKV3D-7A0A0C4DH55 119 aa2.48□□□□□ -2.01
ATXN3-239ENST00000556315 TRBV7-4A0A0J9YYF1 115 aa2.48□□□□□ -2.01
ATXN3-239ENST00000556315 ZNF73O43830 326 aaPredicted RBP2.48□□□□□ -2.01
ATXN3-239ENST00000556315 COX7BP24311 80 aa2.48□□□□□ -2.01
ATXN3-239ENST00000556315 ELOF1P60002 83 aaKnown RBP2.48□□□□□ -2.01
ATXN3-239ENST00000556315 CD164Q04900 197 aa2.48□□□□□ -2.01
ATXN3-239ENST00000556315 Q5XG85 94 aa2.48□□□□□ -2.01
ATXN3-239ENST00000556315 Q6ZRX8 168 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms