RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 CMYA5Q8N3K9 4069 aa8.62□□□□□ -1.03
SIX1-205ENST00000555955 ATRQ13535 2644 aa8.6□□□□□ -1.03
SIX1-205ENST00000555955 KRTAP21-3Q3LHN1 58 aa8.58□□□□□ -1.04
SIX1-205ENST00000555955 DNAH3Q8TD57 4116 aa8.58□□□□□ -1.04
SIX1-205ENST00000555955 FLG2Q5D862 2391 aaPredicted RBP8.57□□□□□ -1.04
SIX1-205ENST00000555955 SPINK6Q6UWN8 80 aa8.56□□□□□ -1.04
SIX1-205ENST00000555955 KRTAP25-1Q3LHN0 102 aa8.56□□□□□ -1.04
SIX1-205ENST00000555955 KRTAP13-1Q8IUC0 172 aa8.53□□□□□ -1.04
SIX1-205ENST00000555955 NBEAL1Q6ZS30 2694 aa8.53□□□□□ -1.04
SIX1-205ENST00000555955 DNAH1Q9P2D7 4330 aa8.53□□□□□ -1.04
SIX1-205ENST00000555955 IGLV7-43P04211 117 aa8.52□□□□□ -1.05
SIX1-205ENST00000555955 CRIPTQ9P021 101 aa8.52□□□□□ -1.05
SIX1-205ENST00000555955 P0C880 135 aa8.5□□□□□ -1.05
SIX1-205ENST00000555955 DNAH10Q8IVF4 4471 aa8.47□□□□□ -1.05
SIX1-205ENST00000555955 OXLD1Q5BKU9 147 aa8.47□□□□□ -1.05
SIX1-205ENST00000555955 LINC00483Q53H64 154 aa8.46□□□□□ -1.05
SIX1-205ENST00000555955 WWC2-AS2Q96NR7 200 aa8.46□□□□□ -1.05
SIX1-205ENST00000555955 KRTAP10-11P60412 298 aa8.46□□□□□ -1.06
SIX1-205ENST00000555955 IGLV5-52A0A0A0MRZ9 124 aa8.45□□□□□ -1.06
SIX1-205ENST00000555955 IGKV2-30P06310 120 aa8.45□□□□□ -1.06
SIX1-205ENST00000555955 ANAPC11Q9NYG5 84 aa8.45□□□□□ -1.06
SIX1-205ENST00000555955 A8MUU9 505 aa8.45□□□□□ -1.06
SIX1-205ENST00000555955 FAM229AH3BQW9 127 aa8.45□□□□□ -1.06
SIX1-205ENST00000555955 STAB1Q9NY15 2570 aa8.43□□□□□ -1.06
SIX1-205ENST00000555955 LINC00304Q8N9R0 145 aa8.43□□□□□ -1.06
SIX1-205ENST00000555955 KRTAP1-5Q9BYS1 174 aa8.43□□□□□ -1.06
SIX1-205ENST00000555955 SPINK1P00995 79 aa8.42□□□□□ -1.06
SIX1-205ENST00000555955 PANO1I0J062 215 aa8.41□□□□□ -1.06
SIX1-205ENST00000555955 COL6A5A8TX70 2615 aa8.41□□□□□ -1.06
SIX1-205ENST00000555955 NOTCH1P46531 2555 aa8.4□□□□□ -1.06
SIX1-205ENST00000555955 LYSTQ99698 3801 aa8.39□□□□□ -1.07
SIX1-205ENST00000555955 C14orf177Q52M58 125 aa8.36□□□□□ -1.07
SIX1-205ENST00000555955 H0YAA0 97 aa8.35□□□□□ -1.07
SIX1-205ENST00000555955 IGKV2D-30A0A075B6S6 120 aa8.35□□□□□ -1.07
SIX1-205ENST00000555955 LY6G6CO95867 125 aa8.33□□□□□ -1.08
SIX1-205ENST00000555955 Q6ZSA8 131 aa8.33□□□□□ -1.08
SIX1-205ENST00000555955 MEGF8Q7Z7M0 2845 aa8.31□□□□□ -1.08
SIX1-205ENST00000555955 CIRBP-AS1Q8TBR5 109 aa8.31□□□□□ -1.08
SIX1-205ENST00000555955 DNHD1Q96M86 4753 aa8.29□□□□□ -1.08
SIX1-205ENST00000555955 SSBP3-AS1Q7Z2R9 100 aa8.29□□□□□ -1.08
SIX1-205ENST00000555955 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.27□□□□□ -1.09
SIX1-205ENST00000555955 DNAH9Q9NYC9 4486 aa8.25□□□□□ -1.09
SIX1-205ENST00000555955 PSORS1C2Q9UIG4 136 aa8.25□□□□□ -1.09
SIX1-205ENST00000555955 A0A0A0MQY5 61 aa8.25□□□□□ -1.09
SIX1-205ENST00000555955 KRTAP16-1A8MUX0 517 aa8.22□□□□□ -1.09
SIX1-205ENST00000555955 SPACA4Q8TDM5 124 aa8.22□□□□□ -1.09
SIX1-205ENST00000555955 NDUFAF8A1L188 74 aa8.22□□□□□ -1.09
SIX1-205ENST00000555955 UBE2DNLQ8IWF7 75 aa8.21□□□□□ -1.1
SIX1-205ENST00000555955 Q8N1X5 172 aa8.21□□□□□ -1.1
SIX1-205ENST00000555955 A0A1B0GU33 70 aa8.21□□□□□ -1.1
SIX1-205ENST00000555955 SPINT4Q6UDR6 99 aa8.21□□□□□ -1.1
SIX1-205ENST00000555955 HUWE1Q7Z6Z7 4374 aaKnown RBP8.19□□□□□ -1.1
SIX1-205ENST00000555955 TGP01266 2768 aa8.19□□□□□ -1.1
SIX1-205ENST00000555955 TYMSOSQ8TAI1 123 aa8.18□□□□□ -1.1
SIX1-205ENST00000555955 FRAS1Q86XX4 4008 aa8.16□□□□□ -1.1
SIX1-205ENST00000555955 DNAH8Q96JB1 4490 aa8.15□□□□□ -1.11
SIX1-205ENST00000555955 MGAM2Q2M2H8 2515 aa8.14□□□□□ -1.11
SIX1-205ENST00000555955 K7ERS5 55 aa8.13□□□□□ -1.11
SIX1-205ENST00000555955 H1FX-AS1Q4G0G2 97 aa8.12□□□□□ -1.11
SIX1-205ENST00000555955 DYNC2H1Q8NCM8 4307 aaKnown RBP8.1□□□□□ -1.11
SIX1-205ENST00000555955 C20orf166-AS1Q96NR2 134 aa8.1□□□□□ -1.11
SIX1-205ENST00000555955 STAB2Q8WWQ8 2551 aa8.09□□□□□ -1.11
SIX1-205ENST00000555955 A0A087WTM6 91 aa8.09□□□□□ -1.11
SIX1-205ENST00000555955 PRKDCP78527 4128 aaKnown RBP8.08□□□□□ -1.12
SIX1-205ENST00000555955 DNAH7Q8WXX0 4024 aa8.06□□□□□ -1.12
SIX1-205ENST00000555955 NUPR2A6NF83 97 aa8.05□□□□□ -1.12
SIX1-205ENST00000555955 Q6ZRN7 208 aaPredicted RBP8.03□□□□□ -1.12
SIX1-205ENST00000555955 DMBT1Q9UGM3 2413 aaPredicted RBP8.02□□□□□ -1.13
SIX1-205ENST00000555955 APLNQ9ULZ1 77 aa8.02□□□□□ -1.13
SIX1-205ENST00000555955 NBDYA0A0U1RRE5 68 aa8.01□□□□□ -1.13
SIX1-205ENST00000555955 TPRXLQ17RH7 258 aa8.01□□□□□ -1.13
SIX1-205ENST00000555955 DNAH17Q9UFH2 4485 aa8□□□□□ -1.13
SIX1-205ENST00000555955 C10orf95Q9H7T3 257 aa7.98□□□□□ -1.13
SIX1-205ENST00000555955 KRTAP15-1Q3LI76 137 aa7.96□□□□□ -1.13
SIX1-205ENST00000555955 FBN3Q75N90 2809 aa7.94□□□□□ -1.14
SIX1-205ENST00000555955 COX6B2Q6YFQ2 88 aa7.94□□□□□ -1.14
SIX1-205ENST00000555955 KRTAP13-2Q52LG2 175 aa7.91□□□□□ -1.14
SIX1-205ENST00000555955 STARD9Q9P2P6 4700 aa7.88□□□□□ -1.15
SIX1-205ENST00000555955 HECTD4Q9Y4D8 3996 aa7.88□□□□□ -1.15
SIX1-205ENST00000555955 KRTAP3-1Q9BYR8 98 aa7.87□□□□□ -1.15
SIX1-205ENST00000555955 PLECQ15149 4684 aaKnown RBP7.86□□□□□ -1.15
SIX1-205ENST00000555955 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
SIX1-205ENST00000555955 DNAH6Q9C0G6 4158 aa7.85□□□□□ -1.15
SIX1-205ENST00000555955 VPS13DQ5THJ4 4388 aa7.83□□□□□ -1.16
SIX1-205ENST00000555955 A0A0D9SG42 100 aa7.83□□□□□ -1.16
SIX1-205ENST00000555955 KMT2AQ03164 3969 aa7.77□□□□□ -1.17
SIX1-205ENST00000555955 LUZP6Q538Z0 58 aa7.72□□□□□ -1.17
SIX1-205ENST00000555955 KRTAP13-4Q3LI77 160 aa7.7□□□□□ -1.18
SIX1-205ENST00000555955 KRTAP1-4P0C5Y4 121 aa7.66□□□□□ -1.18
SIX1-205ENST00000555955 KRTAP10-6P60371 365 aaPredicted RBP7.65□□□□□ -1.19
SIX1-205ENST00000555955 DNAH2Q9P225 4427 aa7.64□□□□□ -1.19
SIX1-205ENST00000555955 C9orf92A6NGG3 77 aa7.61□□□□□ -1.19
SIX1-205ENST00000555955 DNAH11Q96DT5 4516 aa7.59□□□□□ -1.19
SIX1-205ENST00000555955 S4R3F8 94 aa7.57□□□□□ -1.2
SIX1-205ENST00000555955 SACSQ9NZJ4 4579 aa7.57□□□□□ -1.2
SIX1-205ENST00000555955 KRTAP3-2Q9BYR7 98 aa7.52□□□□□ -1.21
SIX1-205ENST00000555955 HYDINQ4G0P3 5121 aa7.52□□□□□ -1.21
SIX1-205ENST00000555955 KRTAP12-2P59991 146 aa7.52□□□□□ -1.21
SIX1-205ENST00000555955 LRP1BQ9NZR2 4599 aa7.51□□□□□ -1.21
SIX1-205ENST00000555955 RYR2Q92736 4967 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms