RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 H3BS24 57 aa10.61□□□□□ -0.71
RCCD1-204ENST00000555737 PLECQ15149 4684 aaKnown RBP10.61□□□□□ -0.71
RCCD1-204ENST00000555737 TP53AIP1Q9HCN2 124 aa10.61□□□□□ -0.71
RCCD1-204ENST00000555737 Q5W150 140 aa10.59□□□□□ -0.71
RCCD1-204ENST00000555737 SPACA4Q8TDM5 124 aa10.59□□□□□ -0.71
RCCD1-204ENST00000555737 WWC2-AS2Q96NR7 200 aa10.59□□□□□ -0.71
RCCD1-204ENST00000555737 Q75L30 129 aa10.58□□□□□ -0.72
RCCD1-204ENST00000555737 RTL8CO15255 209 aa10.56□□□□□ -0.72
RCCD1-204ENST00000555737 MEGF8Q7Z7M0 2845 aa10.55□□□□□ -0.72
RCCD1-204ENST00000555737 C8orf87E5RJ46 101 aa10.55□□□□□ -0.72
RCCD1-204ENST00000555737 Q6ZRN7 208 aaPredicted RBP10.54□□□□□ -0.72
RCCD1-204ENST00000555737 A0A087WTM6 91 aa10.53□□□□□ -0.72
RCCD1-204ENST00000555737 ATP11AUNQ6ZP68 121 aa10.51□□□□□ -0.73
RCCD1-204ENST00000555737 Q6ZR54 194 aa10.51□□□□□ -0.73
RCCD1-204ENST00000555737 IGLV5-52A0A0A0MRZ9 124 aa10.51□□□□□ -0.73
RCCD1-204ENST00000555737 ZNF706Q9Y5V0 76 aaPredicted RBP10.5□□□□□ -0.73
RCCD1-204ENST00000555737 ZNF861PO60384 105 aa10.49□□□□□ -0.73
RCCD1-204ENST00000555737 A6NN06 94 aa10.49□□□□□ -0.73
RCCD1-204ENST00000555737 CDC42SE1Q9NRR8 79 aa10.48□□□□□ -0.73
RCCD1-204ENST00000555737 LINC01558Q9Y6Z2 57 aa10.48□□□□□ -0.73
RCCD1-204ENST00000555737 ASB16-AS1Q495Z4 193 aa10.45□□□□□ -0.74
RCCD1-204ENST00000555737 C7orf65Q6ZTY9 151 aa10.45□□□□□ -0.74
RCCD1-204ENST00000555737 LINC00483Q53H64 154 aa10.43□□□□□ -0.74
RCCD1-204ENST00000555737 NUPR2A6NF83 97 aa10.43□□□□□ -0.74
RCCD1-204ENST00000555737 STARD9Q9P2P6 4700 aa10.41□□□□□ -0.74
RCCD1-204ENST00000555737 KMT2AQ03164 3969 aa10.41□□□□□ -0.74
RCCD1-204ENST00000555737 DNAH8Q96JB1 4490 aa10.39□□□□□ -0.75
RCCD1-204ENST00000555737 PRAC1Q96KF2 57 aa10.38□□□□□ -0.75
RCCD1-204ENST00000555737 IGKV2D-30A0A075B6S6 120 aa10.37□□□□□ -0.75
RCCD1-204ENST00000555737 IGKV2-30P06310 120 aa10.37□□□□□ -0.75
RCCD1-204ENST00000555737 LY6G6CO95867 125 aa10.36□□□□□ -0.75
RCCD1-204ENST00000555737 ACYP2P14621 99 aa10.35□□□□□ -0.75
RCCD1-204ENST00000555737 IGLV7-43P04211 117 aa10.35□□□□□ -0.75
RCCD1-204ENST00000555737 LINC00313P59037 77 aa10.34□□□□□ -0.75
RCCD1-204ENST00000555737 SPINK1P00995 79 aa10.33□□□□□ -0.76
RCCD1-204ENST00000555737 ADM2Q7Z4H4 148 aa10.32□□□□□ -0.76
RCCD1-204ENST00000555737 PLAC8Q9NZF1 115 aa10.31□□□□□ -0.76
RCCD1-204ENST00000555737 A0A1B0GU69 56 aa10.3□□□□□ -0.76
RCCD1-204ENST00000555737 HECTD4Q9Y4D8 3996 aa10.29□□□□□ -0.76
RCCD1-204ENST00000555737 DNAH17Q9UFH2 4485 aa10.28□□□□□ -0.76
RCCD1-204ENST00000555737 C1orf134Q5TEV5 83 aa10.28□□□□□ -0.76
RCCD1-204ENST00000555737 KRTAP10-2P60368 255 aa10.23□□□□□ -0.77
RCCD1-204ENST00000555737 KRTAP13-3Q3SY46 172 aa10.22□□□□□ -0.77
RCCD1-204ENST00000555737 DNAH2Q9P225 4427 aa10.22□□□□□ -0.77
RCCD1-204ENST00000555737 PRKDCP78527 4128 aaKnown RBP10.21□□□□□ -0.77
RCCD1-204ENST00000555737 DNAH6Q9C0G6 4158 aa10.21□□□□□ -0.78
RCCD1-204ENST00000555737 FAM229AH3BQW9 127 aa10.19□□□□□ -0.78
RCCD1-204ENST00000555737 LINC01554Q52M75 96 aa10.17□□□□□ -0.78
RCCD1-204ENST00000555737 Q8N1X5 172 aa10.16□□□□□ -0.78
RCCD1-204ENST00000555737 DMAC1Q96GE9 116 aa10.16□□□□□ -0.78
RCCD1-204ENST00000555737 VPS13DQ5THJ4 4388 aa10.16□□□□□ -0.78
RCCD1-204ENST00000555737 KRTAP13-2Q52LG2 175 aa10.16□□□□□ -0.78
RCCD1-204ENST00000555737 SSBP3-AS1Q7Z2R9 100 aa10.15□□□□□ -0.78
RCCD1-204ENST00000555737 DNAH11Q96DT5 4516 aa10.15□□□□□ -0.78
RCCD1-204ENST00000555737 MIR22HGQ0VDD5 57 aa10.11□□□□□ -0.79
RCCD1-204ENST00000555737 DYNC2H1Q8NCM8 4307 aaKnown RBP10.07□□□□□ -0.8
RCCD1-204ENST00000555737 UQCR11O14957 56 aa10.06□□□□□ -0.8
RCCD1-204ENST00000555737 PLA2G1BP04054 148 aaKnown RBP10.04□□□□□ -0.8
RCCD1-204ENST00000555737 KRTAP10-1P60331 282 aa10.04□□□□□ -0.8
RCCD1-204ENST00000555737 LRP1BQ9NZR2 4599 aa10.04□□□□□ -0.8
RCCD1-204ENST00000555737 FLG2Q5D862 2391 aaPredicted RBP10.02□□□□□ -0.8
RCCD1-204ENST00000555737 ALMS1Q8TCU4 4167 aa10.01□□□□□ -0.81
RCCD1-204ENST00000555737 TYMSOSQ8TAI1 123 aa9.99□□□□□ -0.81
RCCD1-204ENST00000555737 C9orf92A6NGG3 77 aa9.98□□□□□ -0.81
RCCD1-204ENST00000555737 KRTAP16-1A8MUX0 517 aa9.97□□□□□ -0.81
RCCD1-204ENST00000555737 SPATA8Q6RVD6 105 aa9.95□□□□□ -0.82
RCCD1-204ENST00000555737 DNHD1Q96M86 4753 aa9.93□□□□□ -0.82
RCCD1-204ENST00000555737 SMR3BP02814 79 aaPredicted RBP9.92□□□□□ -0.82
RCCD1-204ENST00000555737 CSAG1Q6PB30 78 aa9.92□□□□□ -0.82
RCCD1-204ENST00000555737 DNAH5Q8TE73 4624 aa9.91□□□□□ -0.82
RCCD1-204ENST00000555737 KRTAP1-4P0C5Y4 121 aa9.89□□□□□ -0.83
RCCD1-204ENST00000555737 DMBT1Q9UGM3 2413 aaPredicted RBP9.88□□□□□ -0.83
RCCD1-204ENST00000555737 VPS13BQ7Z7G8 4022 aa9.85□□□□□ -0.83
RCCD1-204ENST00000555737 HYDINQ4G0P3 5121 aa9.83□□□□□ -0.84
RCCD1-204ENST00000555737 CRIPTQ9P021 101 aa9.8□□□□□ -0.84
RCCD1-204ENST00000555737 FAT2Q9NYQ8 4349 aa9.77□□□□□ -0.84
RCCD1-204ENST00000555737 LINC00304Q8N9R0 145 aa9.77□□□□□ -0.85
RCCD1-204ENST00000555737 Q6ZSA8 131 aa9.71□□□□□ -0.86
RCCD1-204ENST00000555737 H0YAA0 97 aa9.68□□□□□ -0.86
RCCD1-204ENST00000555737 PKHD1P08F94 4074 aa9.68□□□□□ -0.86
RCCD1-204ENST00000555737 A0A1B0GU33 70 aa9.64□□□□□ -0.87
RCCD1-204ENST00000555737 FAT1Q14517 4588 aa9.61□□□□□ -0.87
RCCD1-204ENST00000555737 PKD1P98161 4303 aa9.61□□□□□ -0.87
RCCD1-204ENST00000555737 KRTAP3-1Q9BYR8 98 aa9.58□□□□□ -0.88
RCCD1-204ENST00000555737 A0A0D9SG42 100 aa9.51□□□□□ -0.89
RCCD1-204ENST00000555737 ROMO1P60602 79 aa9.51□□□□□ -0.89
RCCD1-204ENST00000555737 H1FX-AS1Q4G0G2 97 aa9.51□□□□□ -0.89
RCCD1-204ENST00000555737 A8MUU9 505 aa9.5□□□□□ -0.89
RCCD1-204ENST00000555737 KRTAP25-1Q3LHN0 102 aa9.41□□□□□ -0.9
RCCD1-204ENST00000555737 COX6B2Q6YFQ2 88 aa9.41□□□□□ -0.9
RCCD1-204ENST00000555737 K7ERS5 55 aa9.4□□□□□ -0.9
RCCD1-204ENST00000555737 C20orf166-AS1Q96NR2 134 aa9.4□□□□□ -0.9
RCCD1-204ENST00000555737 DYNC1H1Q14204 4646 aaKnown RBP9.38□□□□□ -0.91
RCCD1-204ENST00000555737 MYCBP2O75592 4640 aa9.35□□□□□ -0.91
RCCD1-204ENST00000555737 A0A0A0MQY5 61 aa9.32□□□□□ -0.92
RCCD1-204ENST00000555737 P0C880 135 aa9.32□□□□□ -0.92
RCCD1-204ENST00000555737 SACSQ9NZJ4 4579 aa9.28□□□□□ -0.92
RCCD1-204ENST00000555737 LRP1Q07954 4544 aaKnown RBP9.28□□□□□ -0.92
RCCD1-204ENST00000555737 RPS29P62273 56 aaKnown RBP9.27□□□□□ -0.93
RCCD1-204ENST00000555737 KRTAP13-4Q3LI77 160 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms