RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ZC3H13Q5T200 1668 aaKnown RBP-1.2□□□□□ -2.6
SRP54-207ENST00000555535 ITSN2Q9NZM3 1697 aa-1.2□□□□□ -2.6
SRP54-207ENST00000555535 CDC42BPAQ5VT25 1732 aa-1.2□□□□□ -2.6
SRP54-207ENST00000555535 MT1XP80297 61 aa-1.2□□□□□ -2.6
SRP54-207ENST00000555535 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.2□□□□□ -2.6
SRP54-207ENST00000555535 KIF1AQ12756 1690 aa-1.2□□□□□ -2.6
SRP54-207ENST00000555535 KIF14Q15058 1648 aa-1.21□□□□□ -2.6
SRP54-207ENST00000555535 SNHG12Q9BXW3 62 aa-1.21□□□□□ -2.6
SRP54-207ENST00000555535 KIAA0586Q9BVV6 1533 aa-1.21□□□□□ -2.6
SRP54-207ENST00000555535 SMR3BP02814 79 aaPredicted RBP-1.22□□□□□ -2.6
SRP54-207ENST00000555535 SNRPFP62306 86 aaKnown RBP-1.22□□□□□ -2.6
SRP54-207ENST00000555535 RABAC1Q9UI14 185 aa-1.22□□□□□ -2.6
SRP54-207ENST00000555535 PEG3Q9GZU2 1588 aa-1.22□□□□□ -2.61
SRP54-207ENST00000555535 MAP3K4Q9Y6R4 1608 aa-1.22□□□□□ -2.61
SRP54-207ENST00000555535 SPTAN1Q13813 2472 aaKnown RBP-1.23□□□□□ -2.61
SRP54-207ENST00000555535 TNP1P09430 55 aa-1.23□□□□□ -2.61
SRP54-207ENST00000555535 NREPQ16612 68 aa-1.23□□□□□ -2.61
SRP54-207ENST00000555535 LINC00643Q86TS7 51 aa-1.23□□□□□ -2.61
SRP54-207ENST00000555535 S100A16Q96FQ6 103 aaKnown RBP-1.23□□□□□ -2.61
SRP54-207ENST00000555535 MYO9AB2RTY4 2548 aa-1.23□□□□□ -2.61
SRP54-207ENST00000555535 MMP24-AS1A0A0U1RRL7 71 aa-1.24□□□□□ -2.61
SRP54-207ENST00000555535 LRRIQ1Q96JM4 1722 aa-1.24□□□□□ -2.61
SRP54-207ENST00000555535 THOC2Q8NI27 1593 aaKnown RBP-1.25□□□□□ -2.61
SRP54-207ENST00000555535 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.25□□□□□ -2.61
SRP54-207ENST00000555535 PKIAP61925 76 aa-1.25□□□□□ -2.61
SRP54-207ENST00000555535 WT1-ASQ06250 92 aa-1.25□□□□□ -2.61
SRP54-207ENST00000555535 Q9H521 79 aa-1.25□□□□□ -2.61
SRP54-207ENST00000555535 BPTFQ12830 3046 aa-1.25□□□□□ -2.61
SRP54-207ENST00000555535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.25□□□□□ -2.61
SRP54-207ENST00000555535 TLN1Q9Y490 2541 aaKnown RBP-1.26□□□□□ -2.61
SRP54-207ENST00000555535 IGLV5-48A0A075B6I7 105 aa-1.26□□□□□ -2.61
SRP54-207ENST00000555535 A0A087WXM4 84 aa-1.26□□□□□ -2.61
SRP54-207ENST00000555535 LRBAP50851 2863 aa-1.26□□□□□ -2.61
SRP54-207ENST00000555535 DNAH17Q9UFH2 4485 aa-1.27□□□□□ -2.61
SRP54-207ENST00000555535 DEFB131BA0A096LNP1 70 aa-1.27□□□□□ -2.61
SRP54-207ENST00000555535 PYY3Q5JQD4 70 aa-1.27□□□□□ -2.61
SRP54-207ENST00000555535 CCDC88BA6NC98 1476 aa-1.27□□□□□ -2.61
SRP54-207ENST00000555535 CSMD1Q96PZ7 3565 aa-1.28□□□□□ -2.61
SRP54-207ENST00000555535 PVALEFA0A1B0GWK0 134 aa-1.28□□□□□ -2.61
SRP54-207ENST00000555535 MRPL33O75394 65 aaKnown RBP-1.28□□□□□ -2.61
SRP54-207ENST00000555535 MINOS1Q5TGZ0 78 aa-1.28□□□□□ -2.61
SRP54-207ENST00000555535 SMG1Q96Q15 3661 aaKnown RBP-1.28□□□□□ -2.61
SRP54-207ENST00000555535 A0A1B0GUL6 1792 aa-1.29□□□□□ -2.62
SRP54-207ENST00000555535 RNF17Q9BXT8 1623 aaKnown RBP-1.29□□□□□ -2.62
SRP54-207ENST00000555535 HFM1A2PYH4 1435 aa-1.29□□□□□ -2.62
SRP54-207ENST00000555535 SFTA3P0C7M3 94 aa-1.29□□□□□ -2.62
SRP54-207ENST00000555535 RPS27P42677 84 aaKnown RBP-1.29□□□□□ -2.62
SRP54-207ENST00000555535 RPS27LQ71UM5 84 aaKnown RBP-1.29□□□□□ -2.62
SRP54-207ENST00000555535 UBL5Q9BZL1 73 aa-1.29□□□□□ -2.62
SRP54-207ENST00000555535 MYO5CQ9NQX4 1742 aa-1.29□□□□□ -2.62
SRP54-207ENST00000555535 ABCC3O15438 1527 aa-1.3□□□□□ -2.62
SRP54-207ENST00000555535 TRRAPQ9Y4A5 3859 aa-1.3□□□□□ -2.62
SRP54-207ENST00000555535 ARHGAP35Q9NRY4 1499 aa-1.3□□□□□ -2.62
SRP54-207ENST00000555535 ATMQ13315 3056 aa-1.3□□□□□ -2.62
SRP54-207ENST00000555535 DMXL2Q8TDJ6 3036 aa-1.3□□□□□ -2.62
SRP54-207ENST00000555535 DNAH5Q8TE73 4624 aa-1.3□□□□□ -2.62
SRP54-207ENST00000555535 S100A8P05109 93 aa-1.3□□□□□ -2.62
SRP54-207ENST00000555535 CRIP1P50238 77 aa-1.3□□□□□ -2.62
SRP54-207ENST00000555535 KANTRA0A1W2PQU2 76 aa-1.31□□□□□ -2.62
SRP54-207ENST00000555535 SMIM13P0DJ93 91 aa-1.31□□□□□ -2.62
SRP54-207ENST00000555535 MT1HL1P0DM35 61 aa-1.31□□□□□ -2.62
SRP54-207ENST00000555535 FCER1GP30273 86 aa-1.31□□□□□ -2.62
SRP54-207ENST00000555535 ATP5EP2Q5VTU8 51 aa-1.31□□□□□ -2.62
SRP54-207ENST00000555535 NCBP2-AS2Q69YL0 99 aa-1.31□□□□□ -2.62
SRP54-207ENST00000555535 KRTAP8-1Q8IUC2 63 aa-1.31□□□□□ -2.62
SRP54-207ENST00000555535 VPS8Q8N3P4 1428 aa-1.32□□□□□ -2.62
SRP54-207ENST00000555535 NHSQ6T4R5 1651 aa-1.32□□□□□ -2.62
SRP54-207ENST00000555535 MT1EP04732 61 aa-1.32□□□□□ -2.62
SRP54-207ENST00000555535 BOD1L1Q8NFC6 3051 aa-1.33□□□□□ -2.62
SRP54-207ENST00000555535 KDM5DQ9BY66 1539 aa-1.33□□□□□ -2.62
SRP54-207ENST00000555535 BVES-AS1Q5T3Y7 98 aa-1.33□□□□□ -2.62
SRP54-207ENST00000555535 NOP10Q9NPE3 64 aaKnown RBP-1.33□□□□□ -2.62
SRP54-207ENST00000555535 RALGAPBQ86X10 1494 aa-1.33□□□□□ -2.62
SRP54-207ENST00000555535 MT1GP13640 62 aa-1.34□□□□□ -2.62
SRP54-207ENST00000555535 KRTAP20-1Q3LI63 56 aa-1.34□□□□□ -2.62
SRP54-207ENST00000555535 KCNQ1DNQ9H478 68 aa-1.34□□□□□ -2.62
SRP54-207ENST00000555535 V9GYS6 101 aa-1.34□□□□□ -2.62
SRP54-207ENST00000555535 INO80Q9ULG1 1556 aaPredicted RBP-1.34□□□□□ -2.62
SRP54-207ENST00000555535 ADGRG4Q8IZF6 3080 aa-1.35□□□□□ -2.63
SRP54-207ENST00000555535 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.35□□□□□ -2.63
SRP54-207ENST00000555535 H3BUA1 57 aa-1.35□□□□□ -2.63
SRP54-207ENST00000555535 MT1LQ93083 61 aa-1.35□□□□□ -2.63
SRP54-207ENST00000555535 C6orf48Q9UBA6 75 aa-1.35□□□□□ -2.63
SRP54-207ENST00000555535 CDC42BPGQ6DT37 1551 aa-1.35□□□□□ -2.63
SRP54-207ENST00000555535 TTC37Q6PGP7 1564 aa-1.35□□□□□ -2.63
SRP54-207ENST00000555535 MAST1Q9Y2H9 1570 aa-1.35□□□□□ -2.63
SRP54-207ENST00000555535 TDRG1Q3Y452 100 aa-1.36□□□□□ -2.63
SRP54-207ENST00000555535 ENHOQ6UWT2 76 aa-1.37□□□□□ -2.63
SRP54-207ENST00000555535 DNAH10Q8IVF4 4471 aa-1.38□□□□□ -2.63
SRP54-207ENST00000555535 ETDCA0A1B0GVM5 59 aa-1.38□□□□□ -2.63
SRP54-207ENST00000555535 MROH1Q8NDA8 1641 aa-1.38□□□□□ -2.63
SRP54-207ENST00000555535 UACAQ9BZF9 1416 aa-1.39□□□□□ -2.63
SRP54-207ENST00000555535 LMTK2Q8IWU2 1503 aa-1.39□□□□□ -2.63
SRP54-207ENST00000555535 H3BUT2 72 aa-1.39□□□□□ -2.63
SRP54-207ENST00000555535 HMGA1P17096 107 aaKnown RBP-1.39□□□□□ -2.63
SRP54-207ENST00000555535 MGAQ8IWI9 3026 aa-1.39□□□□□ -2.63
SRP54-207ENST00000555535 ERVK-7P63135 1459 aa-1.39□□□□□ -2.63
SRP54-207ENST00000555535 LINC01546A6NGU7 62 aa-1.4□□□□□ -2.63
SRP54-207ENST00000555535 H3BVH4 76 aa-1.4□□□□□ -2.63
SRP54-207ENST00000555535 M0QY20 66 aa-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms