RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 FAT3Q8TDW7 4589 aa3.7□□□□□ -1.82
LINC00643-203ENST00000555518 A0A1W2PNM2 257 aa3.69□□□□□ -1.82
LINC00643-203ENST00000555518 Q5VSD8 79 aa3.69□□□□□ -1.82
LINC00643-203ENST00000555518 IGFL1Q6UW32 110 aa3.69□□□□□ -1.82
LINC00643-203ENST00000555518 TNXBP22105 4242 aa3.68□□□□□ -1.82
LINC00643-203ENST00000555518 FAM240AA0A1B0GVK7 77 aa3.68□□□□□ -1.82
LINC00643-203ENST00000555518 CCKP06307 115 aa3.68□□□□□ -1.82
LINC00643-203ENST00000555518 FAM229BQ4G0N7 80 aa3.68□□□□□ -1.82
LINC00643-203ENST00000555518 LRP1Q07954 4544 aaKnown RBP3.68□□□□□ -1.82
LINC00643-203ENST00000555518 FLG2Q5D862 2391 aaPredicted RBP3.67□□□□□ -1.82
LINC00643-203ENST00000555518 F8WEM9 126 aa3.67□□□□□ -1.82
LINC00643-203ENST00000555518 K7ERU9 68 aa3.67□□□□□ -1.82
LINC00643-203ENST00000555518 PDE6GP18545 87 aa3.67□□□□□ -1.82
LINC00643-203ENST00000555518 MOBPQ13875 183 aa3.67□□□□□ -1.82
LINC00643-203ENST00000555518 Q6JHZ5 121 aa3.67□□□□□ -1.82
LINC00643-203ENST00000555518 Q8NBF4 154 aa3.67□□□□□ -1.82
LINC00643-203ENST00000555518 DSCR8Q96T75 97 aa3.67□□□□□ -1.82
LINC00643-203ENST00000555518 Q6Q795 121 aa3.66□□□□□ -1.82
LINC00643-203ENST00000555518 LINC00846Q9NV44 126 aa3.66□□□□□ -1.82
LINC00643-203ENST00000555518 MYCBP2O75592 4640 aa3.65□□□□□ -1.82
LINC00643-203ENST00000555518 J3QR89 54 aa3.65□□□□□ -1.83
LINC00643-203ENST00000555518 CRYGAP11844 174 aa3.65□□□□□ -1.83
LINC00643-203ENST00000555518 C9orf153Q5TBE3 101 aa3.65□□□□□ -1.83
LINC00643-203ENST00000555518 SSBP3-AS1Q7Z2R9 100 aa3.64□□□□□ -1.83
LINC00643-203ENST00000555518 PCLOQ9Y6V0 5065 aa3.63□□□□□ -1.83
LINC00643-203ENST00000555518 ACYP1P07311 99 aa3.63□□□□□ -1.83
LINC00643-203ENST00000555518 KRTAP13-3Q3SY46 172 aa3.63□□□□□ -1.83
LINC00643-203ENST00000555518 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
LINC00643-203ENST00000555518 VPS25Q9BRG1 176 aa3.63□□□□□ -1.83
LINC00643-203ENST00000555518 TRBV7-7A0A0K0K1E9 115 aa3.62□□□□□ -1.83
LINC00643-203ENST00000555518 A0A1B0GW54 56 aa3.62□□□□□ -1.83
LINC00643-203ENST00000555518 A0A087WSZ3 146 aa3.61□□□□□ -1.83
LINC00643-203ENST00000555518 CD164Q04900 197 aa3.61□□□□□ -1.83
LINC00643-203ENST00000555518 Q6ZVQ6 151 aa3.61□□□□□ -1.83
LINC00643-203ENST00000555518 MT1HL1P0DM35 61 aa3.6□□□□□ -1.83
LINC00643-203ENST00000555518 KRTAP10-8P60410 259 aa3.6□□□□□ -1.83
LINC00643-203ENST00000555518 HRCT1Q6UXD1 115 aa3.6□□□□□ -1.83
LINC00643-203ENST00000555518 TYMSOSQ8TAI1 123 aa3.6□□□□□ -1.83
LINC00643-203ENST00000555518 Q96NJ1 140 aa3.6□□□□□ -1.83
LINC00643-203ENST00000555518 MT-ATP8P03928 68 aa3.59□□□□□ -1.83
LINC00643-203ENST00000555518 Q5XG85 94 aa3.59□□□□□ -1.83
LINC00643-203ENST00000555518 LINC00472Q9H8W2 130 aa3.59□□□□□ -1.83
LINC00643-203ENST00000555518 LINC00643Q86TS7 51 aa3.58□□□□□ -1.84
LINC00643-203ENST00000555518 LINC00304Q8N9R0 145 aa3.58□□□□□ -1.84
LINC00643-203ENST00000555518 UBL5Q9BZL1 73 aa3.58□□□□□ -1.84
LINC00643-203ENST00000555518 IGLV7-46A0A075B6I9 117 aa3.57□□□□□ -1.84
LINC00643-203ENST00000555518 RPS29P62273 56 aaKnown RBP3.57□□□□□ -1.84
LINC00643-203ENST00000555518 NREPQ16612 68 aa3.57□□□□□ -1.84
LINC00643-203ENST00000555518 ASB16-AS1Q495Z4 193 aa3.57□□□□□ -1.84
LINC00643-203ENST00000555518 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
LINC00643-203ENST00000555518 DMBT1Q9UGM3 2413 aaPredicted RBP3.57□□□□□ -1.84
LINC00643-203ENST00000555518 IGKV3D-7A0A0C4DH55 119 aa3.56□□□□□ -1.84
LINC00643-203ENST00000555518 DSCR10P59022 87 aa3.56□□□□□ -1.84
LINC00643-203ENST00000555518 ATP5EP2Q5VTU8 51 aa3.56□□□□□ -1.84
LINC00643-203ENST00000555518 SS18L2Q9UHA2 77 aa3.56□□□□□ -1.84
LINC00643-203ENST00000555518 SPINK1P00995 79 aa3.55□□□□□ -1.84
LINC00643-203ENST00000555518 CXCL6P80162 114 aa3.55□□□□□ -1.84
LINC00643-203ENST00000555518 OXTP01178 125 aa3.54□□□□□ -1.84
LINC00643-203ENST00000555518 DEFB116Q30KQ4 102 aa3.54□□□□□ -1.84
LINC00643-203ENST00000555518 C1orf195Q5TG92 126 aa3.54□□□□□ -1.84
LINC00643-203ENST00000555518 SPAG11AQ6PDA7 123 aa3.54□□□□□ -1.84
LINC00643-203ENST00000555518 Q8N9L7 120 aa3.54□□□□□ -1.84
LINC00643-203ENST00000555518 SIGMAR1Q99720 223 aa3.54□□□□□ -1.84
LINC00643-203ENST00000555518 BPY2O14599 106 aa3.53□□□□□ -1.84
LINC00643-203ENST00000555518 IGKV4-1P06312 121 aa3.53□□□□□ -1.84
LINC00643-203ENST00000555518 LIMD2Q9BT23 127 aa3.53□□□□□ -1.84
LINC00643-203ENST00000555518 K7EQZ3 153 aa3.52□□□□□ -1.85
LINC00643-203ENST00000555518 A0A087WVE0 104 aa3.51□□□□□ -1.85
LINC00643-203ENST00000555518 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
LINC00643-203ENST00000555518 A8MWP4 228 aa3.51□□□□□ -1.85
LINC00643-203ENST00000555518 J3KT08 172 aa3.51□□□□□ -1.85
LINC00643-203ENST00000555518 IMUPQ9GZP8 106 aa3.51□□□□□ -1.85
LINC00643-203ENST00000555518 PRR15Q8IV56 129 aa3.5□□□□□ -1.85
LINC00643-203ENST00000555518 MMP24-AS1A0A0U1RRL7 71 aa3.49□□□□□ -1.85
LINC00643-203ENST00000555518 A0A1B0GVX0 72 aa3.49□□□□□ -1.85
LINC00643-203ENST00000555518 KRTAP16-1A8MUX0 517 aa3.49□□□□□ -1.85
LINC00643-203ENST00000555518 HIST1H4AP62805 103 aaKnown RBP3.49□□□□□ -1.85
LINC00643-203ENST00000555518 RETNLBQ9BQ08 111 aa3.48□□□□□ -1.85
LINC00643-203ENST00000555518 IGHV6-1A0A0B4J1U7 121 aa3.46□□□□□ -1.86
LINC00643-203ENST00000555518 FAM236AA0A1B0GUQ0 79 aa3.46□□□□□ -1.86
LINC00643-203ENST00000555518 FAM236BA0A1B0GV22 79 aa3.46□□□□□ -1.86
LINC00643-203ENST00000555518 OCR1Q9BZK8 76 aa3.46□□□□□ -1.86
LINC00643-203ENST00000555518 C8orf17Q9NRJ1 99 aa3.46□□□□□ -1.86
LINC00643-203ENST00000555518 HMCN2Q8NDA2 5059 aa3.45□□□□□ -1.86
LINC00643-203ENST00000555518 HERC1Q15751 4861 aa3.45□□□□□ -1.86
LINC00643-203ENST00000555518 HCG22E2RYF7 251 aa3.45□□□□□ -1.86
LINC00643-203ENST00000555518 NDUFB1O75438 58 aa3.45□□□□□ -1.86
LINC00643-203ENST00000555518 SCGB1A1P11684 91 aa3.45□□□□□ -1.86
LINC00643-203ENST00000555518 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
LINC00643-203ENST00000555518 C8orf87E5RJ46 101 aa3.44□□□□□ -1.86
LINC00643-203ENST00000555518 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
LINC00643-203ENST00000555518 FP248Q71RG6 208 aaPredicted RBP3.44□□□□□ -1.86
LINC00643-203ENST00000555518 WFDC13Q8IUB5 93 aa3.44□□□□□ -1.86
LINC00643-203ENST00000555518 hDV103S1A0JD37 113 aa3.43□□□□□ -1.86
LINC00643-203ENST00000555518 CASC2Q6XLA1 102 aa3.43□□□□□ -1.86
LINC00643-203ENST00000555518 TMEM254Q8TBM7 123 aa3.42□□□□□ -1.86
LINC00643-203ENST00000555518 LINC00313P59037 77 aa3.41□□□□□ -1.86
LINC00643-203ENST00000555518 C9orf92A6NGG3 77 aa3.4□□□□□ -1.87
LINC00643-203ENST00000555518 ATOX1O00244 68 aa3.4□□□□□ -1.87
LINC00643-203ENST00000555518 MRPL34Q9BQ48 92 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms