RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 C8orf17Q9NRJ1 99 aa7.36□□□□□ -1.23
ARHGEF40-206ENST00000555232 PLAC8Q9NZF1 115 aa7.36□□□□□ -1.23
ARHGEF40-206ENST00000555232 PRAC1Q96KF2 57 aa7.36□□□□□ -1.23
ARHGEF40-206ENST00000555232 DNHD1Q96M86 4753 aa7.35□□□□□ -1.23
ARHGEF40-206ENST00000555232 FAM229AH3BQW9 127 aa7.35□□□□□ -1.23
ARHGEF40-206ENST00000555232 A0A0A0MQY5 61 aa7.35□□□□□ -1.23
ARHGEF40-206ENST00000555232 MRPL34Q9BQ48 92 aaKnown RBP7.34□□□□□ -1.23
ARHGEF40-206ENST00000555232 A0A087X002 238 aa7.34□□□□□ -1.23
ARHGEF40-206ENST00000555232 C7orf65Q6ZTY9 151 aa7.33□□□□□ -1.24
ARHGEF40-206ENST00000555232 COA5Q86WW8 74 aa7.33□□□□□ -1.24
ARHGEF40-206ENST00000555232 LCE6AA0A183 80 aa7.33□□□□□ -1.24
ARHGEF40-206ENST00000555232 ANK2Q01484 3957 aa7.33□□□□□ -1.24
ARHGEF40-206ENST00000555232 A0A1B0GVX0 72 aa7.33□□□□□ -1.24
ARHGEF40-206ENST00000555232 TP53AIP1Q9HCN2 124 aa7.31□□□□□ -1.24
ARHGEF40-206ENST00000555232 LINC00304Q8N9R0 145 aa7.31□□□□□ -1.24
ARHGEF40-206ENST00000555232 C8orf87E5RJ46 101 aa7.3□□□□□ -1.24
ARHGEF40-206ENST00000555232 NOTCH2NLQ7Z3S9 236 aa7.29□□□□□ -1.24
ARHGEF40-206ENST00000555232 LOC101927531A0A1B0GV80 90 aa7.29□□□□□ -1.24
ARHGEF40-206ENST00000555232 A6NN06 94 aa7.28□□□□□ -1.24
ARHGEF40-206ENST00000555232 SSBP3-AS1Q7Z2R9 100 aa7.28□□□□□ -1.24
ARHGEF40-206ENST00000555232 HUWE1Q7Z6Z7 4374 aaKnown RBP7.27□□□□□ -1.24
ARHGEF40-206ENST00000555232 CDC42SE1Q9NRR8 79 aa7.27□□□□□ -1.25
ARHGEF40-206ENST00000555232 Q75L30 129 aa7.26□□□□□ -1.25
ARHGEF40-206ENST00000555232 SPINK7P58062 85 aa7.26□□□□□ -1.25
ARHGEF40-206ENST00000555232 LINC00472Q9H8W2 130 aa7.25□□□□□ -1.25
ARHGEF40-206ENST00000555232 ADM2Q7Z4H4 148 aa7.23□□□□□ -1.25
ARHGEF40-206ENST00000555232 SPANXA2-OT1Q8N9U9 137 aa7.21□□□□□ -1.26
ARHGEF40-206ENST00000555232 MMP24-AS1A0A0U1RRL7 71 aa7.21□□□□□ -1.26
ARHGEF40-206ENST00000555232 ACYP2P14621 99 aa7.21□□□□□ -1.26
ARHGEF40-206ENST00000555232 Q8N1X5 172 aa7.2□□□□□ -1.26
ARHGEF40-206ENST00000555232 A0A1B0GU69 56 aa7.2□□□□□ -1.26
ARHGEF40-206ENST00000555232 DNAH10Q8IVF4 4471 aa7.2□□□□□ -1.26
ARHGEF40-206ENST00000555232 SPRR1BP22528 89 aa7.2□□□□□ -1.26
ARHGEF40-206ENST00000555232 H3BPC8 53 aa7.18□□□□□ -1.26
ARHGEF40-206ENST00000555232 LYSTQ99698 3801 aa7.15□□□□□ -1.27
ARHGEF40-206ENST00000555232 IGLV7-46A0A075B6I9 117 aa7.13□□□□□ -1.27
ARHGEF40-206ENST00000555232 KRTAP13-1Q8IUC0 172 aa7.13□□□□□ -1.27
ARHGEF40-206ENST00000555232 KRTAP29-1A8MX34 341 aaPredicted RBP7.12□□□□□ -1.27
ARHGEF40-206ENST00000555232 LINC01554Q52M75 96 aa7.12□□□□□ -1.27
ARHGEF40-206ENST00000555232 KRTAP13-2Q52LG2 175 aa7.12□□□□□ -1.27
ARHGEF40-206ENST00000555232 PLECQ15149 4684 aaKnown RBP7.12□□□□□ -1.27
ARHGEF40-206ENST00000555232 PRKDCP78527 4128 aaKnown RBP7.12□□□□□ -1.27
ARHGEF40-206ENST00000555232 LINC01558Q9Y6Z2 57 aa7.11□□□□□ -1.27
ARHGEF40-206ENST00000555232 K7ERS5 55 aa7.11□□□□□ -1.27
ARHGEF40-206ENST00000555232 Q5VSD8 79 aa7.09□□□□□ -1.27
ARHGEF40-206ENST00000555232 DNAH9Q9NYC9 4486 aa7.09□□□□□ -1.27
ARHGEF40-206ENST00000555232 J3QL48 77 aa7.08□□□□□ -1.28
ARHGEF40-206ENST00000555232 HRES1P13985 223 aa7.08□□□□□ -1.28
ARHGEF40-206ENST00000555232 LINC00483Q53H64 154 aa7.07□□□□□ -1.28
ARHGEF40-206ENST00000555232 Q5W150 140 aa7.07□□□□□ -1.28
ARHGEF40-206ENST00000555232 STARD9Q9P2P6 4700 aa7□□□□□ -1.29
ARHGEF40-206ENST00000555232 CSAG1Q6PB30 78 aa7□□□□□ -1.29
ARHGEF40-206ENST00000555232 KMT2AQ03164 3969 aa6.96□□□□□ -1.3
ARHGEF40-206ENST00000555232 DNAH11Q96DT5 4516 aa6.94□□□□□ -1.3
ARHGEF40-206ENST00000555232 UQCR11O14957 56 aa6.92□□□□□ -1.3
ARHGEF40-206ENST00000555232 MIR22HGQ0VDD5 57 aa6.92□□□□□ -1.3
ARHGEF40-206ENST00000555232 KRTAP1-4P0C5Y4 121 aa6.91□□□□□ -1.3
ARHGEF40-206ENST00000555232 Q6ZSA8 131 aa6.91□□□□□ -1.3
ARHGEF40-206ENST00000555232 A0A0D9SG42 100 aa6.9□□□□□ -1.3
ARHGEF40-206ENST00000555232 KRTAP21-3Q3LHN1 58 aa6.89□□□□□ -1.31
ARHGEF40-206ENST00000555232 DNAH7Q8WXX0 4024 aa6.86□□□□□ -1.31
ARHGEF40-206ENST00000555232 DNAH1Q9P2D7 4330 aa6.85□□□□□ -1.31
ARHGEF40-206ENST00000555232 FAT1Q14517 4588 aa6.83□□□□□ -1.32
ARHGEF40-206ENST00000555232 CMYA5Q8N3K9 4069 aa6.82□□□□□ -1.32
ARHGEF40-206ENST00000555232 COX6B2Q6YFQ2 88 aa6.82□□□□□ -1.32
ARHGEF40-206ENST00000555232 CRIPTQ9P021 101 aa6.8□□□□□ -1.32
ARHGEF40-206ENST00000555232 SPATA8Q6RVD6 105 aa6.77□□□□□ -1.33
ARHGEF40-206ENST00000555232 DNAH5Q8TE73 4624 aa6.76□□□□□ -1.33
ARHGEF40-206ENST00000555232 SPINT4Q6UDR6 99 aa6.74□□□□□ -1.33
ARHGEF40-206ENST00000555232 DNAH8Q96JB1 4490 aa6.73□□□□□ -1.33
ARHGEF40-206ENST00000555232 ASB16-AS1Q495Z4 193 aa6.7□□□□□ -1.34
ARHGEF40-206ENST00000555232 LRP1BQ9NZR2 4599 aa6.7□□□□□ -1.34
ARHGEF40-206ENST00000555232 DNAH3Q8TD57 4116 aa6.7□□□□□ -1.34
ARHGEF40-206ENST00000555232 VPS13DQ5THJ4 4388 aa6.69□□□□□ -1.34
ARHGEF40-206ENST00000555232 A0A1B0GU33 70 aa6.69□□□□□ -1.34
ARHGEF40-206ENST00000555232 DMAC1Q96GE9 116 aa6.68□□□□□ -1.34
ARHGEF40-206ENST00000555232 A0A1B0GVY2 172 aa6.67□□□□□ -1.34
ARHGEF40-206ENST00000555232 FRAS1Q86XX4 4008 aa6.66□□□□□ -1.34
ARHGEF40-206ENST00000555232 DNAH6Q9C0G6 4158 aa6.65□□□□□ -1.34
ARHGEF40-206ENST00000555232 MYCBP2O75592 4640 aa6.63□□□□□ -1.35
ARHGEF40-206ENST00000555232 HYDINQ4G0P3 5121 aa6.63□□□□□ -1.35
ARHGEF40-206ENST00000555232 ROMO1P60602 79 aa6.63□□□□□ -1.35
ARHGEF40-206ENST00000555232 KIAA1109Q2LD37 5005 aa6.6□□□□□ -1.35
ARHGEF40-206ENST00000555232 DNAH2Q9P225 4427 aa6.58□□□□□ -1.36
ARHGEF40-206ENST00000555232 KRTAP25-1Q3LHN0 102 aa6.57□□□□□ -1.36
ARHGEF40-206ENST00000555232 KRTAP16-1A8MUX0 517 aa6.57□□□□□ -1.36
ARHGEF40-206ENST00000555232 DNAH17Q9UFH2 4485 aa6.56□□□□□ -1.36
ARHGEF40-206ENST00000555232 DYNC1H1Q14204 4646 aaKnown RBP6.56□□□□□ -1.36
ARHGEF40-206ENST00000555232 KRTAP13-3Q3SY46 172 aa6.55□□□□□ -1.36
ARHGEF40-206ENST00000555232 PKHD1P08F94 4074 aa6.54□□□□□ -1.36
ARHGEF40-206ENST00000555232 FAT3Q8TDW7 4589 aa6.54□□□□□ -1.36
ARHGEF40-206ENST00000555232 S4R3F8 94 aa6.54□□□□□ -1.36
ARHGEF40-206ENST00000555232 KMT2CQ8NEZ4 4911 aaKnown RBP6.53□□□□□ -1.36
ARHGEF40-206ENST00000555232 A8MUU9 505 aa6.51□□□□□ -1.37
ARHGEF40-206ENST00000555232 M0R2T5 61 aa6.5□□□□□ -1.37
ARHGEF40-206ENST00000555232 VPS13BQ7Z7G8 4022 aa6.5□□□□□ -1.37
ARHGEF40-206ENST00000555232 RYR1P21817 5038 aa6.5□□□□□ -1.37
ARHGEF40-206ENST00000555232 XP32Q5T750 250 aa6.5□□□□□ -1.37
ARHGEF40-206ENST00000555232 KRTAP4-5Q9BYR2 181 aa6.49□□□□□ -1.37
ARHGEF40-206ENST00000555232 LRP1Q07954 4544 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 198.6 ms