RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 LINC00308Q8TCZ7 52 aa2.65□□□□□ -1.99
ATXN3-228ENST00000554592 ANAPC13Q9BS18 74 aa2.65□□□□□ -1.99
ATXN3-228ENST00000554592 IGKV2-28A0A075B6P5 120 aa2.64□□□□□ -1.99
ATXN3-228ENST00000554592 A0A1B0GX51 115 aa2.64□□□□□ -1.99
ATXN3-228ENST00000554592 IGKV2D-28P01615 120 aa2.64□□□□□ -1.99
ATXN3-228ENST00000554592 LINC00643Q86TS7 51 aa2.64□□□□□ -1.99
ATXN3-228ENST00000554592 ZNF625Q96I27 306 aaPredicted RBP2.64□□□□□ -1.99
ATXN3-228ENST00000554592 TEX49A0A1B0GTD5 131 aa2.63□□□□□ -1.99
ATXN3-228ENST00000554592 H3BQ85 93 aa2.63□□□□□ -1.99
ATXN3-228ENST00000554592 H7C2G1 150 aa2.63□□□□□ -1.99
ATXN3-228ENST00000554592 RPS29P62273 56 aaKnown RBP2.63□□□□□ -1.99
ATXN3-228ENST00000554592 PCOTHQ58A44 107 aa2.63□□□□□ -1.99
ATXN3-228ENST00000554592 SPRR4Q96PI1 79 aa2.63□□□□□ -1.99
ATXN3-228ENST00000554592 TMEM126AQ9H061 195 aa2.63□□□□□ -1.99
ATXN3-228ENST00000554592 M0R378 163 aa2.62□□□□□ -1.99
ATXN3-228ENST00000554592 COX17Q14061 63 aa2.62□□□□□ -1.99
ATXN3-228ENST00000554592 HIGD2AQ9BW72 106 aa2.62□□□□□ -1.99
ATXN3-228ENST00000554592 ZNF706Q9Y5V0 76 aaPredicted RBP2.62□□□□□ -1.99
ATXN3-228ENST00000554592 NDUFC2O95298 119 aa2.61□□□□□ -1.99
ATXN3-228ENST00000554592 DNAL4O96015 105 aa2.61□□□□□ -1.99
ATXN3-228ENST00000554592 BAALC-AS2P0C853 105 aa2.61□□□□□ -1.99
ATXN3-228ENST00000554592 LINC00158P58513 81 aa2.61□□□□□ -1.99
ATXN3-228ENST00000554592 NPC2P61916 151 aa2.61□□□□□ -1.99
ATXN3-228ENST00000554592 S100A7L2Q5SY68 101 aa2.61□□□□□ -1.99
ATXN3-228ENST00000554592 SSBP3-AS1Q7Z2R9 100 aa2.61□□□□□ -1.99
ATXN3-228ENST00000554592 MIR7-3HGQ8N6C7 128 aa2.61□□□□□ -1.99
ATXN3-228ENST00000554592 OBSCN-AS1Q96MR7 158 aa2.61□□□□□ -1.99
ATXN3-228ENST00000554592 JMJD7-PLA2G4BH0Y9G9 81 aa2.6□□□□□ -1.99
ATXN3-228ENST00000554592 PFN2P35080 140 aa2.6□□□□□ -1.99
ATXN3-228ENST00000554592 COX6B2Q6YFQ2 88 aa2.6□□□□□ -1.99
ATXN3-228ENST00000554592 CLEC2BQ92478 149 aa2.6□□□□□ -1.99
ATXN3-228ENST00000554592 SND1-IT1Q9HBX3 110 aa2.6□□□□□ -1.99
ATXN3-228ENST00000554592 ATOX1O00244 68 aa2.59□□□□□ -1.99
ATXN3-228ENST00000554592 UQCRQO14949 82 aa2.59□□□□□ -1.99
ATXN3-228ENST00000554592 ATP5EP2Q5VTU8 51 aa2.59□□□□□ -1.99
ATXN3-228ENST00000554592 SOSTDC1Q6X4U4 206 aa2.59□□□□□ -1.99
ATXN3-228ENST00000554592 SMCR5Q8TEV8 140 aa2.59□□□□□ -1.99
ATXN3-228ENST00000554592 TRBV10-3A0A0K0K1G6 114 aa2.58□□□□□ -2
ATXN3-228ENST00000554592 TMEM256-PLSCR3K7ERE1 68 aa2.58□□□□□ -2
ATXN3-228ENST00000554592 LINC00483Q53H64 154 aa2.58□□□□□ -2
ATXN3-228ENST00000554592 Q6JHZ5 121 aa2.58□□□□□ -2
ATXN3-228ENST00000554592 CAMK2N1Q7Z7J9 78 aa2.58□□□□□ -2
ATXN3-228ENST00000554592 ORMDL1Q9P0S3 153 aa2.58□□□□□ -2
ATXN3-228ENST00000554592 SSPOA2VEC9 5147 aa2.58□□□□□ -2
ATXN3-228ENST00000554592 PDE6GP18545 87 aa2.57□□□□□ -2
ATXN3-228ENST00000554592 HIST1H4AP62805 103 aaKnown RBP2.57□□□□□ -2
ATXN3-228ENST00000554592 RPS28P62857 69 aaKnown RBP2.57□□□□□ -2
ATXN3-228ENST00000554592 MOBPQ13875 183 aa2.57□□□□□ -2
ATXN3-228ENST00000554592 OR13C6PQ8NH95 151 aa2.57□□□□□ -2
ATXN3-228ENST00000554592 SMIM11BQ8TCY0 68 aa2.57□□□□□ -2
ATXN3-228ENST00000554592 FAM236AA0A1B0GUQ0 79 aa2.56□□□□□ -2
ATXN3-228ENST00000554592 FAM236BA0A1B0GV22 79 aa2.56□□□□□ -2
ATXN3-228ENST00000554592 CCDC179H3BU77 68 aa2.56□□□□□ -2
ATXN3-228ENST00000554592 CCKP06307 115 aa2.56□□□□□ -2
ATXN3-228ENST00000554592 COX7CP15954 63 aa2.56□□□□□ -2
ATXN3-228ENST00000554592 USH2AO75445 5202 aa2.55□□□□□ -2
ATXN3-228ENST00000554592 TRBV7-6A0A0J9YX20 115 aa2.55□□□□□ -2
ATXN3-228ENST00000554592 C9orf92A6NGG3 77 aa2.55□□□□□ -2
ATXN3-228ENST00000554592 NCR3O14931 201 aa2.55□□□□□ -2
ATXN3-228ENST00000554592 SMIM20Q8N5G0 67 aa2.55□□□□□ -2
ATXN3-228ENST00000554592 Q8NDZ9 215 aa2.55□□□□□ -2
ATXN3-228ENST00000554592 FCGBPQ9Y6R7 5405 aaPredicted RBP2.54□□□□□ -2
ATXN3-228ENST00000554592 LOC110117498A0A087WWA1 95 aa2.54□□□□□ -2
ATXN3-228ENST00000554592 ETDCA0A1B0GVM5 59 aa2.54□□□□□ -2
ATXN3-228ENST00000554592 hADV29S1A0JD25 119 aa2.54□□□□□ -2
ATXN3-228ENST00000554592 IGLV6-57P01721 117 aa2.54□□□□□ -2
ATXN3-228ENST00000554592 SPRR1AP35321 89 aa2.54□□□□□ -2
ATXN3-228ENST00000554592 C9orf153Q5TBE3 101 aa2.54□□□□□ -2
ATXN3-228ENST00000554592 SERP2Q8N6R1 65 aa2.54□□□□□ -2
ATXN3-228ENST00000554592 UBL5Q9BZL1 73 aa2.54□□□□□ -2
ATXN3-228ENST00000554592 KCNQ1DNQ9H478 68 aa2.54□□□□□ -2
ATXN3-228ENST00000554592 SS18L2Q9UHA2 77 aa2.54□□□□□ -2
ATXN3-228ENST00000554592 TRAV23DV6A0A075B6W5 121 aa2.53□□□□□ -2
ATXN3-228ENST00000554592 A0A1B0GW54 56 aa2.53□□□□□ -2
ATXN3-228ENST00000554592 TMEM258P61165 79 aa2.53□□□□□ -2
ATXN3-228ENST00000554592 C6orf99Q4VX62 202 aa2.53□□□□□ -2
ATXN3-228ENST00000554592 LINC00575Q6W349 94 aa2.53□□□□□ -2
ATXN3-228ENST00000554592 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
ATXN3-228ENST00000554592 Q8N9L7 120 aa2.53□□□□□ -2
ATXN3-228ENST00000554592 LIMD2Q9BT23 127 aa2.53□□□□□ -2
ATXN3-228ENST00000554592 FLGP20930 4061 aaPredicted RBP2.53□□□□□ -2
ATXN3-228ENST00000554592 J3KT08 172 aa2.52□□□□□ -2.01
ATXN3-228ENST00000554592 ERC2-IT1O76042 136 aa2.52□□□□□ -2.01
ATXN3-228ENST00000554592 RPL37P61927 97 aaKnown RBP2.52□□□□□ -2.01
ATXN3-228ENST00000554592 RBM3P98179 157 aaKnown RBP2.52□□□□□ -2.01
ATXN3-228ENST00000554592 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.52□□□□□ -2.01
ATXN3-228ENST00000554592 C14orf132Q9NPU4 83 aa2.52□□□□□ -2.01
ATXN3-228ENST00000554592 LINC00846Q9NV44 126 aa2.52□□□□□ -2.01
ATXN3-228ENST00000554592 ZNF73O43830 326 aaPredicted RBP2.51□□□□□ -2.01
ATXN3-228ENST00000554592 DSCR8Q96T75 97 aa2.51□□□□□ -2.01
ATXN3-228ENST00000554592 NDUFC1O43677 76 aa2.5□□□□□ -2.01
ATXN3-228ENST00000554592 COX7BP24311 80 aa2.5□□□□□ -2.01
ATXN3-228ENST00000554592 ELOF1P60002 83 aaKnown RBP2.5□□□□□ -2.01
ATXN3-228ENST00000554592 Q6ZQT0 140 aa2.5□□□□□ -2.01
ATXN3-228ENST00000554592 TRAV7A0A075B6U4 112 aa2.49□□□□□ -2.01
ATXN3-228ENST00000554592 ATP5EP56381 51 aaPredicted RBP2.49□□□□□ -2.01
ATXN3-228ENST00000554592 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
ATXN3-228ENST00000554592 HRCT1Q6UXD1 115 aa2.49□□□□□ -2.01
ATXN3-228ENST00000554592 Q9BRP9 147 aa2.49□□□□□ -2.01
ATXN3-228ENST00000554592 IGKV3D-7A0A0C4DH55 119 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms