RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 Q6ZQT0 140 aa4.68□□□□□ -1.66
ACTN1-213ENST00000554508 LCE2CQ5TA81 110 aa4.65□□□□□ -1.67
ACTN1-213ENST00000554508 ACYP1P07311 99 aa4.64□□□□□ -1.67
ACTN1-213ENST00000554508 KRTAP19-2Q3LHN2 52 aa4.64□□□□□ -1.67
ACTN1-213ENST00000554508 Q96NJ1 140 aa4.64□□□□□ -1.67
ACTN1-213ENST00000554508 A0A1B0GW54 56 aa4.63□□□□□ -1.67
ACTN1-213ENST00000554508 DEFB116Q30KQ4 102 aa4.63□□□□□ -1.67
ACTN1-213ENST00000554508 SIGMAR1Q99720 223 aa4.63□□□□□ -1.67
ACTN1-213ENST00000554508 IGKV4-1P06312 121 aa4.62□□□□□ -1.67
ACTN1-213ENST00000554508 ATP11AUNQ6ZP68 121 aa4.62□□□□□ -1.67
ACTN1-213ENST00000554508 Q75L30 129 aa4.62□□□□□ -1.67
ACTN1-213ENST00000554508 LINC00472Q9H8W2 130 aa4.61□□□□□ -1.67
ACTN1-213ENST00000554508 FAM240AA0A1B0GVK7 77 aa4.6□□□□□ -1.67
ACTN1-213ENST00000554508 MT1HP80294 61 aa4.6□□□□□ -1.67
ACTN1-213ENST00000554508 NREPQ16612 68 aa4.6□□□□□ -1.67
ACTN1-213ENST00000554508 UBL5Q9BZL1 73 aa4.6□□□□□ -1.67
ACTN1-213ENST00000554508 FLGP20930 4061 aaPredicted RBP4.6□□□□□ -1.67
ACTN1-213ENST00000554508 J3KT08 172 aa4.58□□□□□ -1.68
ACTN1-213ENST00000554508 COX6B2Q6YFQ2 88 aa4.58□□□□□ -1.68
ACTN1-213ENST00000554508 KRTAP3-3Q9BYR6 98 aa4.58□□□□□ -1.68
ACTN1-213ENST00000554508 KRTAP3-2Q9BYR7 98 aa4.58□□□□□ -1.68
ACTN1-213ENST00000554508 IGHV6-1A0A0B4J1U7 121 aa4.57□□□□□ -1.68
ACTN1-213ENST00000554508 C20orf166-AS1Q96NR2 134 aa4.57□□□□□ -1.68
ACTN1-213ENST00000554508 A8MUU9 505 aa4.56□□□□□ -1.68
ACTN1-213ENST00000554508 DSCR10P59022 87 aa4.56□□□□□ -1.68
ACTN1-213ENST00000554508 NDUFB1O75438 58 aa4.55□□□□□ -1.68
ACTN1-213ENST00000554508 LINC00313P59037 77 aa4.55□□□□□ -1.68
ACTN1-213ENST00000554508 Q6ZVQ6 151 aa4.55□□□□□ -1.68
ACTN1-213ENST00000554508 KRTAP9-6A0A140TA67 174 aa4.54□□□□□ -1.68
ACTN1-213ENST00000554508 A0A1B0GVX0 72 aa4.54□□□□□ -1.68
ACTN1-213ENST00000554508 LINC00846Q9NV44 126 aa4.54□□□□□ -1.68
ACTN1-213ENST00000554508 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
ACTN1-213ENST00000554508 A8MWP4 228 aa4.53□□□□□ -1.68
ACTN1-213ENST00000554508 M0R2T5 61 aa4.53□□□□□ -1.68
ACTN1-213ENST00000554508 BPY2O14599 106 aa4.53□□□□□ -1.68
ACTN1-213ENST00000554508 LINC00643Q86TS7 51 aa4.53□□□□□ -1.68
ACTN1-213ENST00000554508 KRTAP4-6Q9BYQ5 205 aa4.53□□□□□ -1.68
ACTN1-213ENST00000554508 LORP23490 312 aaPredicted RBP4.52□□□□□ -1.69
ACTN1-213ENST00000554508 KRTAP10-6P60371 365 aaPredicted RBP4.52□□□□□ -1.69
ACTN1-213ENST00000554508 ATP5EP2Q5VTU8 51 aa4.52□□□□□ -1.69
ACTN1-213ENST00000554508 NOTCH2NLQ7Z3S9 236 aa4.52□□□□□ -1.69
ACTN1-213ENST00000554508 IGKV3D-7A0A0C4DH55 119 aa4.51□□□□□ -1.69
ACTN1-213ENST00000554508 C8orf87E5RJ46 101 aa4.51□□□□□ -1.69
ACTN1-213ENST00000554508 K7EQZ3 153 aa4.5□□□□□ -1.69
ACTN1-213ENST00000554508 PRR15Q8IV56 129 aa4.5□□□□□ -1.69
ACTN1-213ENST00000554508 KRTAP16-1A8MUX0 517 aa4.49□□□□□ -1.69
ACTN1-213ENST00000554508 HIST1H4AP62805 103 aaKnown RBP4.49□□□□□ -1.69
ACTN1-213ENST00000554508 C8orf17Q9NRJ1 99 aa4.49□□□□□ -1.69
ACTN1-213ENST00000554508 CXCL6P80162 114 aa4.48□□□□□ -1.69
ACTN1-213ENST00000554508 Q8N9L7 120 aa4.48□□□□□ -1.69
ACTN1-213ENST00000554508 MMP24-AS1A0A0U1RRL7 71 aa4.45□□□□□ -1.7
ACTN1-213ENST00000554508 MT-ATP8P03928 68 aa4.45□□□□□ -1.7
ACTN1-213ENST00000554508 CRCT1Q9UGL9 99 aa4.45□□□□□ -1.7
ACTN1-213ENST00000554508 hDV103S1A0JD37 113 aa4.44□□□□□ -1.7
ACTN1-213ENST00000554508 IMUPQ9GZP8 106 aa4.44□□□□□ -1.7
ACTN1-213ENST00000554508 CASC2Q6XLA1 102 aa4.43□□□□□ -1.7
ACTN1-213ENST00000554508 WFDC13Q8IUB5 93 aa4.43□□□□□ -1.7
ACTN1-213ENST00000554508 TMEM254Q8TBM7 123 aa4.43□□□□□ -1.7
ACTN1-213ENST00000554508 MRPL34Q9BQ48 92 aaKnown RBP4.43□□□□□ -1.7
ACTN1-213ENST00000554508 NDUFS5O43920 106 aa4.42□□□□□ -1.7
ACTN1-213ENST00000554508 SCGB1A1P11684 91 aa4.42□□□□□ -1.7
ACTN1-213ENST00000554508 FAM236DA0A1B0GTK5 79 aa4.41□□□□□ -1.7
ACTN1-213ENST00000554508 FAM236CP0DP71 79 aa4.41□□□□□ -1.7
ACTN1-213ENST00000554508 Q8N9P0 234 aaPredicted RBP4.41□□□□□ -1.7
ACTN1-213ENST00000554508 RBM12B-AS1Q9P1G2 102 aa4.41□□□□□ -1.7
ACTN1-213ENST00000554508 HCG22E2RYF7 251 aa4.4□□□□□ -1.71
ACTN1-213ENST00000554508 MPLKIPQ8TAP9 179 aa4.4□□□□□ -1.71
ACTN1-213ENST00000554508 HRES1P13985 223 aa4.39□□□□□ -1.71
ACTN1-213ENST00000554508 ZCCHC13Q8WW36 166 aaKnown RBP4.39□□□□□ -1.71
ACTN1-213ENST00000554508 FAM236AA0A1B0GUQ0 79 aa4.38□□□□□ -1.71
ACTN1-213ENST00000554508 FAM236BA0A1B0GV22 79 aa4.38□□□□□ -1.71
ACTN1-213ENST00000554508 A0A087WVE0 104 aa4.37□□□□□ -1.71
ACTN1-213ENST00000554508 FSIP2Q5CZC0 6907 aa4.36□□□□□ -1.71
ACTN1-213ENST00000554508 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
ACTN1-213ENST00000554508 ATOX1O00244 68 aa4.35□□□□□ -1.71
ACTN1-213ENST00000554508 SPINK7P58062 85 aa4.34□□□□□ -1.71
ACTN1-213ENST00000554508 SMIM20Q8N5G0 67 aa4.34□□□□□ -1.71
ACTN1-213ENST00000554508 ANAPC13Q9BS18 74 aa4.33□□□□□ -1.72
ACTN1-213ENST00000554508 Q5W150 140 aa4.31□□□□□ -1.72
ACTN1-213ENST00000554508 TP53AIP1Q9HCN2 124 aa4.31□□□□□ -1.72
ACTN1-213ENST00000554508 MT2AP02795 61 aa4.29□□□□□ -1.72
ACTN1-213ENST00000554508 IGKV2D-30A0A075B6S6 120 aa4.28□□□□□ -1.72
ACTN1-213ENST00000554508 IGKV2-30P06310 120 aa4.28□□□□□ -1.72
ACTN1-213ENST00000554508 TRAV7A0A075B6U4 112 aa4.27□□□□□ -1.73
ACTN1-213ENST00000554508 MP68P56378 58 aa4.26□□□□□ -1.73
ACTN1-213ENST00000554508 C7orf65Q6ZTY9 151 aa4.26□□□□□ -1.73
ACTN1-213ENST00000554508 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
ACTN1-213ENST00000554508 UQCRQO14949 82 aa4.25□□□□□ -1.73
ACTN1-213ENST00000554508 KRTAP10-10P60014 251 aa4.25□□□□□ -1.73
ACTN1-213ENST00000554508 TRAV22A0A0B4J277 110 aa4.24□□□□□ -1.73
ACTN1-213ENST00000554508 MT1FP04733 61 aa4.24□□□□□ -1.73
ACTN1-213ENST00000554508 PCP4P48539 62 aa4.23□□□□□ -1.73
ACTN1-213ENST00000554508 C5orf47Q569G3 176 aa4.23□□□□□ -1.73
ACTN1-213ENST00000554508 H0Y9P7 68 aa4.22□□□□□ -1.73
ACTN1-213ENST00000554508 COX7CP15954 63 aa4.22□□□□□ -1.73
ACTN1-213ENST00000554508 KRTAP9-3Q9BYQ3 159 aa4.22□□□□□ -1.73
ACTN1-213ENST00000554508 OCR1Q9BZK8 76 aa4.22□□□□□ -1.73
ACTN1-213ENST00000554508 H1FX-AS1Q4G0G2 97 aa4.21□□□□□ -1.74
ACTN1-213ENST00000554508 USH2AO75445 5202 aa4.2□□□□□ -1.74
ACTN1-213ENST00000554508 LOC101927531A0A1B0GV80 90 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms