RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 DNAH2Q9P225 4427 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 IGLV1-50A0A075B6I6 118 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 IGLV5-45A0A087WSX0 123 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 KRTAP29-1A8MX34 341 aaPredicted RBP1.49□□□□□ -2.17
PRPF39-205ENST00000554081 COX8AP10176 69 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 SERP2Q8N6R1 65 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 Q8NDZ9 215 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 KRTAP23-1A1A580 65 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 COX6CP09669 75 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 HSPG2P98160 4391 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 TIMM17BO60830 172 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 SOSTDC1Q6X4U4 206 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 OBSCN-AS1Q96MR7 158 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 TRAV12-1A0A0B4J245 112 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 KRTAP4-16G5E9R7 235 aaPredicted RBP1.48□□□□□ -2.17
PRPF39-205ENST00000554081 IGLV6-57P01721 117 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 ACYP1P07311 99 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 COX17Q14061 63 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 Q1T7F1 81 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 ATP11AUNQ6ZP68 121 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 KRTAP7-1Q8IUC3 87 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 SMIM11BQ8TCY0 68 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 CYSTM1Q9H1C7 97 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 HIGD1BQ9P298 99 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 A0A087WSZ3 146 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 TRAV13-2A0A0B4J235 113 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 CCKP06307 115 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 CLEC2BQ92478 149 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 SPRR4Q96PI1 79 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 IGLV5-39A0A0G2JS06 123 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 Q96NJ1 140 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 MUC2Q02817 5179 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 IGLV5-37A0A075B6J1 123 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 NDUFC1O43677 76 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 TLX1NBP0CAT3 122 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 LINC01547P58512 204 aaPredicted RBP1.47□□□□□ -2.17
PRPF39-205ENST00000554081 Q6ZRX8 168 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 TEX49A0A1B0GTD5 131 aa1.46□□□□□ -2.18
PRPF39-205ENST00000554081 MT1HL1P0DM35 61 aa1.46□□□□□ -2.18
PRPF39-205ENST00000554081 KRTAP13-2Q52LG2 175 aa1.46□□□□□ -2.18
PRPF39-205ENST00000554081 PCOTHQ58A44 107 aa1.46□□□□□ -2.18
PRPF39-205ENST00000554081 LINC00643Q86TS7 51 aa1.46□□□□□ -2.18
PRPF39-205ENST00000554081 DHRS4-AS1Q9P1J3 65 aa1.46□□□□□ -2.18
PRPF39-205ENST00000554081 DNAH8Q96JB1 4490 aa1.46□□□□□ -2.18
PRPF39-205ENST00000554081 IGKV4-1P06312 121 aa1.45□□□□□ -2.18
PRPF39-205ENST00000554081 RBM3P98179 157 aaKnown RBP1.45□□□□□ -2.18
PRPF39-205ENST00000554081 H7BZZ5 65 aa1.45□□□□□ -2.18
PRPF39-205ENST00000554081 LIMD2Q9BT23 127 aa1.45□□□□□ -2.18
PRPF39-205ENST00000554081 FAT2Q9NYQ8 4349 aa1.45□□□□□ -2.18
PRPF39-205ENST00000554081 ALMS1Q8TCU4 4167 aa1.45□□□□□ -2.18
PRPF39-205ENST00000554081 KRTAP16-1A8MUX0 517 aa1.45□□□□□ -2.18
PRPF39-205ENST00000554081 KLKP1Q107X0 134 aa1.45□□□□□ -2.18
PRPF39-205ENST00000554081 SPINK1P00995 79 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 KRTAP1-4P0C5Y4 121 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 FXYD2P54710 66 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 KRTAP10-8P60410 259 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 SPAG11AQ6PDA7 123 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.44□□□□□ -2.18
PRPF39-205ENST00000554081 KCNQ1DNQ9H478 68 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 PRO1854Q9UHT4 67 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 DSCR10P59022 87 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 MPLKIPQ8TAP9 179 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 OCR1Q9BZK8 76 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 CFC1BP0CG36 223 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 CFC1P0CG37 223 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 SSBP3-AS1Q7Z2R9 100 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 DNAH17Q9UFH2 4485 aa1.43□□□□□ -2.18
PRPF39-205ENST00000554081 ORMDL1Q9P0S3 153 aa1.43□□□□□ -2.18
PRPF39-205ENST00000554081 TRBV10-2A0A0K0K1G8 114 aa1.43□□□□□ -2.18
PRPF39-205ENST00000554081 NDUFB1O75438 58 aa1.43□□□□□ -2.18
PRPF39-205ENST00000554081 BAALC-AS2P0C853 105 aa1.43□□□□□ -2.18
PRPF39-205ENST00000554081 KRTAP10-4P60372 401 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-205ENST00000554081 WFDC13Q8IUB5 93 aa1.43□□□□□ -2.18
PRPF39-205ENST00000554081 IGKV2D-30A0A075B6S6 120 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 IGKV2-30P06310 120 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 CYP4F30PQ9H0H9 118 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 C14orf132Q9NPU4 83 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 Q8N377 158 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 LPAP08519 4548 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 ELOF1P60002 83 aaKnown RBP1.42□□□□□ -2.18
PRPF39-205ENST00000554081 NREPQ16612 68 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 LINC00575Q6W349 94 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 PRAC1Q96KF2 57 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 HECTD4Q9Y4D8 3996 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 A0A0B4J2C4 111 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 H0YGX0 51 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 ATXN8Q156A1 80 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 FAM229BQ4G0N7 80 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 Q6JHZ5 121 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 IGFL1Q6UW32 110 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 SPTSSBQ8NFR3 76 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 C8orf17Q9NRJ1 99 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 PKD1P98161 4303 aa1.4□□□□□ -2.18
PRPF39-205ENST00000554081 TRAV7A0A075B6U4 112 aa1.4□□□□□ -2.18
PRPF39-205ENST00000554081 hDV103S1A0JD37 113 aa1.4□□□□□ -2.18
PRPF39-205ENST00000554081 KRTAP10-7P60409 375 aaPredicted RBP1.4□□□□□ -2.18
PRPF39-205ENST00000554081 Q8N9L7 120 aa1.4□□□□□ -2.18
PRPF39-205ENST00000554081 CDC42SE1Q9NRR8 79 aa1.4□□□□□ -2.18
PRPF39-205ENST00000554081 LITAFQ99732 161 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms