RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 SPANXN1Q5VSR9 72 aa1.05□□□□□ -2.24
SCFD1-210ENST00000553693 RPL7L1Q6DKI1 246 aaKnown RBP1.05□□□□□ -2.24
SCFD1-210ENST00000553693 ATP11AUNQ6ZP68 121 aa1.05□□□□□ -2.24
SCFD1-210ENST00000553693 Q6ZQY7 126 aa1.05□□□□□ -2.24
SCFD1-210ENST00000553693 Q86TA4 180 aa1.05□□□□□ -2.24
SCFD1-210ENST00000553693 TOMM5Q8N4H5 51 aa1.05□□□□□ -2.24
SCFD1-210ENST00000553693 KCNRGQ8N5I3 272 aa1.05□□□□□ -2.24
SCFD1-210ENST00000553693 PPP1R1CQ8WVI7 109 aa1.05□□□□□ -2.24
SCFD1-210ENST00000553693 PPDPFLQ8WWR9 84 aa1.05□□□□□ -2.24
SCFD1-210ENST00000553693 DMAC1Q96GE9 116 aa1.05□□□□□ -2.24
SCFD1-210ENST00000553693 LIMD2Q9BT23 127 aa1.05□□□□□ -2.24
SCFD1-210ENST00000553693 A0A087WXM4 84 aa1.04□□□□□ -2.24
SCFD1-210ENST00000553693 BCE1O60756 84 aa1.04□□□□□ -2.24
SCFD1-210ENST00000553693 SIX6O95475 246 aa1.04□□□□□ -2.24
SCFD1-210ENST00000553693 IGKCP01834 107 aa1.04□□□□□ -2.24
SCFD1-210ENST00000553693 SPAG11BQ08648 103 aa1.04□□□□□ -2.24
SCFD1-210ENST00000553693 CSAG1Q6PB30 78 aa1.04□□□□□ -2.24
SCFD1-210ENST00000553693 LINC00575Q6W349 94 aa1.04□□□□□ -2.24
SCFD1-210ENST00000553693 C5orf38Q86SI9 138 aa1.04□□□□□ -2.24
SCFD1-210ENST00000553693 COPS9Q8WXC6 57 aa1.04□□□□□ -2.24
SCFD1-210ENST00000553693 Q9H521 79 aa1.04□□□□□ -2.24
SCFD1-210ENST00000553693 CDC42SE2Q9NRR3 84 aa1.04□□□□□ -2.24
SCFD1-210ENST00000553693 C6orf48Q9UBA6 75 aa1.04□□□□□ -2.24
SCFD1-210ENST00000553693 V9GYH0 126 aa1.04□□□□□ -2.24
SCFD1-210ENST00000553693 TRBV30A0A0K0K1B3 111 aa1.03□□□□□ -2.24
SCFD1-210ENST00000553693 SPAG11AQ6PDA7 123 aa1.03□□□□□ -2.24
SCFD1-210ENST00000553693 COX6B2Q6YFQ2 88 aa1.03□□□□□ -2.24
SCFD1-210ENST00000553693 RPL39LQ96EH5 51 aaKnown RBP1.03□□□□□ -2.24
SCFD1-210ENST00000553693 TMEM167BQ9NRX6 74 aa1.03□□□□□ -2.24
SCFD1-210ENST00000553693 MRPL35Q9NZE8 188 aaKnown RBP1.03□□□□□ -2.24
SCFD1-210ENST00000553693 ERG28Q9UKR5 140 aa1.03□□□□□ -2.24
SCFD1-210ENST00000553693 UBE2D4Q9Y2X8 147 aa1.03□□□□□ -2.24
SCFD1-210ENST00000553693 FAM236AA0A1B0GUQ0 79 aa1.02□□□□□ -2.25
SCFD1-210ENST00000553693 FAM236BA0A1B0GV22 79 aa1.02□□□□□ -2.25
SCFD1-210ENST00000553693 A0A1W2PPM0 123 aa1.02□□□□□ -2.25
SCFD1-210ENST00000553693 NAP1L6A6NFF2 107 aa1.02□□□□□ -2.25
SCFD1-210ENST00000553693 CCDC179H3BU77 68 aa1.02□□□□□ -2.25
SCFD1-210ENST00000553693 NDUFA1O15239 70 aa1.02□□□□□ -2.25
SCFD1-210ENST00000553693 SNCGO76070 127 aa1.02□□□□□ -2.25
SCFD1-210ENST00000553693 MT2AP02795 61 aa1.02□□□□□ -2.25
SCFD1-210ENST00000553693 UBE2G1P62253 170 aa1.02□□□□□ -2.25
SCFD1-210ENST00000553693 KRTAP19-6Q3LI70 58 aa1.02□□□□□ -2.25
SCFD1-210ENST00000553693 LINC01545Q5VT33 79 aa1.02□□□□□ -2.25
SCFD1-210ENST00000553693 GPR98Q8WXG9 6306 aa1.02□□□□□ -2.25
SCFD1-210ENST00000553693 TMEM191AQ9H0A3 160 aa1.02□□□□□ -2.25
SCFD1-210ENST00000553693 MUC12Q9UKN1 5478 aa1.02□□□□□ -2.25
SCFD1-210ENST00000553693 KMT2DO14686 5537 aa1.02□□□□□ -2.25
SCFD1-210ENST00000553693 I3L3M4 83 aa1.01□□□□□ -2.25
SCFD1-210ENST00000553693 MT1FP04733 61 aa1.01□□□□□ -2.25
SCFD1-210ENST00000553693 CCKP06307 115 aa1.01□□□□□ -2.25
SCFD1-210ENST00000553693 PRLHP81277 87 aa1.01□□□□□ -2.25
SCFD1-210ENST00000553693 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
SCFD1-210ENST00000553693 BAGE2Q86Y30 109 aa1.01□□□□□ -2.25
SCFD1-210ENST00000553693 TMEM242Q9NWH2 141 aa1.01□□□□□ -2.25
SCFD1-210ENST00000553693 C9orf92A6NGG3 77 aa1□□□□□ -2.25
SCFD1-210ENST00000553693 A6NN06 94 aa1□□□□□ -2.25
SCFD1-210ENST00000553693 F2Z2F3 143 aa1□□□□□ -2.25
SCFD1-210ENST00000553693 MPC2O95563 127 aa1□□□□□ -2.25
SCFD1-210ENST00000553693 SPINK1P00995 79 aa1□□□□□ -2.25
SCFD1-210ENST00000553693 POLR2KP53803 58 aaKnown RBP1□□□□□ -2.25
SCFD1-210ENST00000553693 SERF2P84101 59 aa1□□□□□ -2.25
SCFD1-210ENST00000553693 Q6ZUT4 128 aa1□□□□□ -2.25
SCFD1-210ENST00000553693 C9orf62Q8N4C0 152 aa1□□□□□ -2.25
SCFD1-210ENST00000553693 SPRR4Q96PI1 79 aa1□□□□□ -2.25
SCFD1-210ENST00000553693 LINC00846Q9NV44 126 aa1□□□□□ -2.25
SCFD1-210ENST00000553693 CTXND1A0A1B0GTU2 59 aa0.99□□□□□ -2.25
SCFD1-210ENST00000553693 C7orf77A4D0Y5 90 aa0.99□□□□□ -2.25
SCFD1-210ENST00000553693 KRTAP2-3P0C7H8 128 aa0.99□□□□□ -2.25
SCFD1-210ENST00000553693 RPL39P62891 51 aaKnown RBP0.99□□□□□ -2.25
SCFD1-210ENST00000553693 KRTAP2-4Q9BYR9 128 aa0.99□□□□□ -2.25
SCFD1-210ENST00000553693 ST20Q9HBF5 79 aa0.99□□□□□ -2.25
SCFD1-210ENST00000553693 NDUFA12Q9UI09 145 aa0.99□□□□□ -2.25
SCFD1-210ENST00000553693 MDN1Q9NU22 5596 aa0.99□□□□□ -2.25
SCFD1-210ENST00000553693 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
SCFD1-210ENST00000553693 TEX49A0A1B0GTD5 131 aa0.98□□□□□ -2.25
SCFD1-210ENST00000553693 LOC101927531A0A1B0GV80 90 aa0.98□□□□□ -2.25
SCFD1-210ENST00000553693 FCER1GP30273 86 aa0.98□□□□□ -2.25
SCFD1-210ENST00000553693 RPS29P62273 56 aaKnown RBP0.98□□□□□ -2.25
SCFD1-210ENST00000553693 Q5BKY6 102 aa0.98□□□□□ -2.25
SCFD1-210ENST00000553693 TMEM141Q96I45 108 aa0.98□□□□□ -2.25
SCFD1-210ENST00000553693 TCEAL7Q9BRU2 100 aa0.98□□□□□ -2.25
SCFD1-210ENST00000553693 CNFNQ9BYD5 112 aa0.98□□□□□ -2.25
SCFD1-210ENST00000553693 TOMM7Q9P0U1 55 aa0.98□□□□□ -2.25
SCFD1-210ENST00000553693 F8VRH5 84 aa0.97□□□□□ -2.25
SCFD1-210ENST00000553693 RPL37P61927 97 aaKnown RBP0.97□□□□□ -2.25
SCFD1-210ENST00000553693 SSBP3-AS1Q7Z2R9 100 aa0.97□□□□□ -2.25
SCFD1-210ENST00000553693 GNG4P50150 75 aa0.96□□□□□ -2.26
SCFD1-210ENST00000553693 Q8IZM0 81 aa0.96□□□□□ -2.26
SCFD1-210ENST00000553693 FAM213BQ8TBF2 198 aa0.96□□□□□ -2.26
SCFD1-210ENST00000553693 C20orf202A1L168 122 aa0.95□□□□□ -2.26
SCFD1-210ENST00000553693 IFI27L1Q96BM0 104 aa0.95□□□□□ -2.26
SCFD1-210ENST00000553693 KRTAP2-1Q9BYU5 128 aa0.95□□□□□ -2.26
SCFD1-210ENST00000553693 GNG13Q9P2W3 67 aa0.95□□□□□ -2.26
SCFD1-210ENST00000553693 CDKN2A-AS1Q9UH64 79 aa0.95□□□□□ -2.26
SCFD1-210ENST00000553693 AHNAK2Q8IVF2 5795 aa0.94□□□□□ -2.26
SCFD1-210ENST00000553693 FXYD6-FXYD2A0A087WZ82 144 aa0.94□□□□□ -2.26
SCFD1-210ENST00000553693 A0A1B0GUT8 65 aa0.94□□□□□ -2.26
SCFD1-210ENST00000553693 PPP1R17O96001 155 aa0.94□□□□□ -2.26
SCFD1-210ENST00000553693 SPRR1AP35321 89 aa0.94□□□□□ -2.26
SCFD1-210ENST00000553693 IFI27P40305 119 aaPredicted RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms