RNA–Protein interactions for RNA: ENST00000553691.5

VIPAS39-205, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-205ENST00000553691 Q8NDZ9 215 aa3.97□□□□□ -1.77
VIPAS39-205ENST00000553691 CYSTM1Q9H1C7 97 aa3.97□□□□□ -1.77
VIPAS39-205ENST00000553691 C6orf48Q9UBA6 75 aa3.97□□□□□ -1.77
VIPAS39-205ENST00000553691 F8WEM9 126 aa3.96□□□□□ -1.78
VIPAS39-205ENST00000553691 M0R378 163 aa3.96□□□□□ -1.78
VIPAS39-205ENST00000553691 ZNF73O43830 326 aaPredicted RBP3.96□□□□□ -1.78
VIPAS39-205ENST00000553691 ELOF1P60002 83 aaKnown RBP3.96□□□□□ -1.78
VIPAS39-205ENST00000553691 Q6ZQY7 126 aa3.96□□□□□ -1.78
VIPAS39-205ENST00000553691 KRTAP7-1Q8IUC3 87 aa3.96□□□□□ -1.78
VIPAS39-205ENST00000553691 BPY2O14599 106 aa3.95□□□□□ -1.78
VIPAS39-205ENST00000553691 NREPQ16612 68 aa3.95□□□□□ -1.78
VIPAS39-205ENST00000553691 KRTAP11-1Q8IUC1 163 aa3.95□□□□□ -1.78
VIPAS39-205ENST00000553691 TMEM254Q8TBM7 123 aa3.95□□□□□ -1.78
VIPAS39-205ENST00000553691 CAMK2N2Q96S95 79 aa3.95□□□□□ -1.78
VIPAS39-205ENST00000553691 TLX1NBP0CAT3 122 aa3.94□□□□□ -1.78
VIPAS39-205ENST00000553691 XAGE1AQ9HD64 81 aa3.94□□□□□ -1.78
VIPAS39-205ENST00000553691 LINC00474Q9P2X8 69 aa3.94□□□□□ -1.78
VIPAS39-205ENST00000553691 FAM168BA1KXE4 195 aa3.93□□□□□ -1.78
VIPAS39-205ENST00000553691 Q6ZRP5 223 aa3.93□□□□□ -1.78
VIPAS39-205ENST00000553691 C7orf33Q8WU49 177 aa3.93□□□□□ -1.78
VIPAS39-205ENST00000553691 PHF5AQ7RTV0 110 aaKnown RBP3.92□□□□□ -1.78
VIPAS39-205ENST00000553691 DHRS4-AS1Q9P1J3 65 aa3.92□□□□□ -1.78
VIPAS39-205ENST00000553691 PKIGQ9Y2B9 76 aa3.92□□□□□ -1.78
VIPAS39-205ENST00000553691 NDUFB1O75438 58 aa3.91□□□□□ -1.78
VIPAS39-205ENST00000553691 KRTAP10-8P60410 259 aa3.91□□□□□ -1.78
VIPAS39-205ENST00000553691 PSORS1C2Q9UIG4 136 aa3.91□□□□□ -1.78
VIPAS39-205ENST00000553691 SNURFQ9Y675 71 aa3.91□□□□□ -1.78
VIPAS39-205ENST00000553691 V9GYY9 64 aa3.91□□□□□ -1.78
VIPAS39-205ENST00000553691 VPREB1P12018 145 aa3.9□□□□□ -1.79
VIPAS39-205ENST00000553691 SPINK6Q6UWN8 80 aa3.9□□□□□ -1.79
VIPAS39-205ENST00000553691 OCR1Q9BZK8 76 aa3.9□□□□□ -1.79
VIPAS39-205ENST00000553691 LPAP08519 4548 aa3.89□□□□□ -1.79
VIPAS39-205ENST00000553691 IGLV5-48A0A075B6I7 105 aa3.89□□□□□ -1.79
VIPAS39-205ENST00000553691 IGKV4-1P06312 121 aa3.89□□□□□ -1.79
VIPAS39-205ENST00000553691 IGLV5-37A0A075B6J1 123 aa3.88□□□□□ -1.79
VIPAS39-205ENST00000553691 MT3P25713 68 aa3.88□□□□□ -1.79
VIPAS39-205ENST00000553691 FP248Q71RG6 208 aaPredicted RBP3.88□□□□□ -1.79
VIPAS39-205ENST00000553691 NKAPP1Q8N9T2 125 aa3.88□□□□□ -1.79
VIPAS39-205ENST00000553691 KCNQ1DNQ9H478 68 aa3.88□□□□□ -1.79
VIPAS39-205ENST00000553691 IGLV7-43P04211 117 aa3.87□□□□□ -1.79
VIPAS39-205ENST00000553691 KRTAP1-4P0C5Y4 121 aa3.87□□□□□ -1.79
VIPAS39-205ENST00000553691 H3BPC8 53 aa3.86□□□□□ -1.79
VIPAS39-205ENST00000553691 Q1T7F1 81 aa3.86□□□□□ -1.79
VIPAS39-205ENST00000553691 C1orf137Q5JT78 98 aa3.86□□□□□ -1.79
VIPAS39-205ENST00000553691 REG3GQ6UW15 175 aa3.86□□□□□ -1.79
VIPAS39-205ENST00000553691 ETDCA0A1B0GVM5 59 aa3.85□□□□□ -1.79
VIPAS39-205ENST00000553691 C1orf195Q5TG92 126 aa3.85□□□□□ -1.79
VIPAS39-205ENST00000553691 BRK1Q8WUW1 75 aa3.85□□□□□ -1.79
VIPAS39-205ENST00000553691 SPRR4Q96PI1 79 aa3.85□□□□□ -1.79
VIPAS39-205ENST00000553691 CYP4F30PQ9H0H9 118 aa3.85□□□□□ -1.79
VIPAS39-205ENST00000553691 RPL37AP8A6NKH3 93 aa3.84□□□□□ -1.79
VIPAS39-205ENST00000553691 H0Y9J4 135 aa3.84□□□□□ -1.79
VIPAS39-205ENST00000553691 PRR15Q8IV56 129 aa3.84□□□□□ -1.79
VIPAS39-205ENST00000553691 Q8NBF4 154 aa3.84□□□□□ -1.79
VIPAS39-205ENST00000553691 hDV103S1A0JD37 113 aa3.83□□□□□ -1.8
VIPAS39-205ENST00000553691 MP68P56378 58 aa3.83□□□□□ -1.8
VIPAS39-205ENST00000553691 Q6ZRX8 168 aa3.83□□□□□ -1.8
VIPAS39-205ENST00000553691 MRPL55Q7Z7F7 128 aaKnown RBP3.82□□□□□ -1.8
VIPAS39-205ENST00000553691 KRTAP13-1Q8IUC0 172 aa3.82□□□□□ -1.8
VIPAS39-205ENST00000553691 Q8N377 158 aa3.82□□□□□ -1.8
VIPAS39-205ENST00000553691 ZCCHC13Q8WW36 166 aaKnown RBP3.82□□□□□ -1.8
VIPAS39-205ENST00000553691 HIGD2AQ9BW72 106 aa3.82□□□□□ -1.8
VIPAS39-205ENST00000553691 IGLV1-50A0A075B6I6 118 aa3.81□□□□□ -1.8
VIPAS39-205ENST00000553691 HCG22E2RYF7 251 aa3.81□□□□□ -1.8
VIPAS39-205ENST00000553691 SPRR1AP35321 89 aa3.81□□□□□ -1.8
VIPAS39-205ENST00000553691 SMIM29Q86T20 159 aa3.81□□□□□ -1.8
VIPAS39-205ENST00000553691 SPANXA2-OT1Q8N9U9 137 aa3.81□□□□□ -1.8
VIPAS39-205ENST00000553691 ZNF861PO60384 105 aa3.8□□□□□ -1.8
VIPAS39-205ENST00000553691 UBE2BP63146 152 aa3.8□□□□□ -1.8
VIPAS39-205ENST00000553691 PRR4Q16378 134 aa3.8□□□□□ -1.8
VIPAS39-205ENST00000553691 A0A087X002 238 aa3.79□□□□□ -1.8
VIPAS39-205ENST00000553691 KRTAP4-16G5E9R7 235 aaPredicted RBP3.79□□□□□ -1.8
VIPAS39-205ENST00000553691 LIMD2Q9BT23 127 aa3.79□□□□□ -1.8
VIPAS39-205ENST00000553691 IGLV8-61A0A075B6I0 122 aa3.78□□□□□ -1.8
VIPAS39-205ENST00000553691 A0A1W2PNM2 257 aa3.78□□□□□ -1.8
VIPAS39-205ENST00000553691 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
VIPAS39-205ENST00000553691 Q8N9L7 120 aa3.78□□□□□ -1.8
VIPAS39-205ENST00000553691 C1orf64Q8NEQ6 169 aa3.78□□□□□ -1.8
VIPAS39-205ENST00000553691 DEFB105AQ8NG35 78 aa3.78□□□□□ -1.8
VIPAS39-205ENST00000553691 DSCR10P59022 87 aa3.77□□□□□ -1.81
VIPAS39-205ENST00000553691 PMAIP1Q13794 54 aa3.77□□□□□ -1.81
VIPAS39-205ENST00000553691 Q9BRP9 147 aa3.77□□□□□ -1.81
VIPAS39-205ENST00000553691 TRAV22A0A0B4J277 110 aa3.76□□□□□ -1.81
VIPAS39-205ENST00000553691 UBE2AP49459 152 aa3.76□□□□□ -1.81
VIPAS39-205ENST00000553691 SEC61GP60059 68 aa3.76□□□□□ -1.81
VIPAS39-205ENST00000553691 FAM229BQ4G0N7 80 aa3.76□□□□□ -1.81
VIPAS39-205ENST00000553691 KRTAP13-2Q52LG2 175 aa3.76□□□□□ -1.81
VIPAS39-205ENST00000553691 PRLHP81277 87 aa3.75□□□□□ -1.81
VIPAS39-205ENST00000553691 ST20-AS1Q8NBB2 130 aa3.75□□□□□ -1.81
VIPAS39-205ENST00000553691 ANAPC11Q9NYG5 84 aa3.75□□□□□ -1.81
VIPAS39-205ENST00000553691 K7EQZ3 153 aa3.74□□□□□ -1.81
VIPAS39-205ENST00000553691 TP53AIP1Q9HCN2 124 aa3.74□□□□□ -1.81
VIPAS39-205ENST00000553691 LINC00208Q96KT6 92 aa3.73□□□□□ -1.81
VIPAS39-205ENST00000553691 SPRR1BP22528 89 aa3.72□□□□□ -1.81
VIPAS39-205ENST00000553691 A8MWP4 228 aa3.71□□□□□ -1.82
VIPAS39-205ENST00000553691 H0Y9P7 68 aa3.71□□□□□ -1.82
VIPAS39-205ENST00000553691 NDUFS5O43920 106 aa3.71□□□□□ -1.82
VIPAS39-205ENST00000553691 CD164Q04900 197 aa3.71□□□□□ -1.82
VIPAS39-205ENST00000553691 IGFL1Q6UW32 110 aa3.71□□□□□ -1.82
VIPAS39-205ENST00000553691 CASC2Q6XLA1 102 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms