RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 SCGB3A1Q96QR1 104 aa2.8□□□□□ -1.96
ATXN3-223ENST00000553686 AMELXQ99217 191 aa2.8□□□□□ -1.96
ATXN3-223ENST00000553686 SPANXB1Q9NS25 103 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-223ENST00000553686 RBM12B-AS1Q9P1G2 102 aa2.8□□□□□ -1.96
ATXN3-223ENST00000553686 C11orf86A6NJI1 115 aa2.79□□□□□ -1.96
ATXN3-223ENST00000553686 ERC2-IT1O76042 136 aa2.79□□□□□ -1.96
ATXN3-223ENST00000553686 SPRR2EP22531 72 aa2.79□□□□□ -1.96
ATXN3-223ENST00000553686 SPRR2BP35325 72 aa2.79□□□□□ -1.96
ATXN3-223ENST00000553686 SPRR2AP35326 72 aa2.79□□□□□ -1.96
ATXN3-223ENST00000553686 FXYD2P54710 66 aa2.79□□□□□ -1.96
ATXN3-223ENST00000553686 HIST1H4GQ99525 98 aa2.79□□□□□ -1.96
ATXN3-223ENST00000553686 SIGMAR1Q99720 223 aa2.79□□□□□ -1.96
ATXN3-223ENST00000553686 H3BMG7 143 aa2.78□□□□□ -1.96
ATXN3-223ENST00000553686 H7C2G1 150 aa2.78□□□□□ -1.96
ATXN3-223ENST00000553686 PMVKQ15126 192 aa2.78□□□□□ -1.96
ATXN3-223ENST00000553686 NHP2Q9NX24 153 aaKnown RBP2.78□□□□□ -1.96
ATXN3-223ENST00000553686 IGIPA6NJ69 53 aa2.77□□□□□ -1.97
ATXN3-223ENST00000553686 A8MWP4 228 aa2.77□□□□□ -1.97
ATXN3-223ENST00000553686 SEC61GP60059 68 aa2.77□□□□□ -1.97
ATXN3-223ENST00000553686 Q8NDZ9 215 aa2.77□□□□□ -1.97
ATXN3-223ENST00000553686 RAB37Q96AX2 223 aa2.77□□□□□ -1.97
ATXN3-223ENST00000553686 SPANXDQ9BXN6 97 aa2.77□□□□□ -1.97
ATXN3-223ENST00000553686 ERG28Q9UKR5 140 aa2.77□□□□□ -1.97
ATXN3-223ENST00000553686 LOC107984156A0A0G2JMH3 177 aa2.76□□□□□ -1.97
ATXN3-223ENST00000553686 A0A1B0GV72 72 aa2.76□□□□□ -1.97
ATXN3-223ENST00000553686 ZNF815PA8K554 130 aa2.76□□□□□ -1.97
ATXN3-223ENST00000553686 LEPROTO15243 131 aa2.76□□□□□ -1.97
ATXN3-223ENST00000553686 SCGB1D4Q6XE38 83 aa2.76□□□□□ -1.97
ATXN3-223ENST00000553686 ARL17AQ8IVW1 177 aa2.76□□□□□ -1.97
ATXN3-223ENST00000553686 LAMTOR3Q9UHA4 124 aa2.76□□□□□ -1.97
ATXN3-223ENST00000553686 A0A0B4J2C4 111 aa2.75□□□□□ -1.97
ATXN3-223ENST00000553686 A0A0G2JQZ4 141 aa2.75□□□□□ -1.97
ATXN3-223ENST00000553686 TINCRA0A1B0GVN0 87 aa2.75□□□□□ -1.97
ATXN3-223ENST00000553686 TCL1BO95988 128 aa2.75□□□□□ -1.97
ATXN3-223ENST00000553686 Q6ZRX8 168 aa2.75□□□□□ -1.97
ATXN3-223ENST00000553686 PPDPFLQ8WWR9 84 aa2.75□□□□□ -1.97
ATXN3-223ENST00000553686 COPS9Q8WXC6 57 aa2.75□□□□□ -1.97
ATXN3-223ENST00000553686 OBSCN-AS1Q96MR7 158 aa2.75□□□□□ -1.97
ATXN3-223ENST00000553686 Q9BRP9 147 aa2.75□□□□□ -1.97
ATXN3-223ENST00000553686 TMEM223A0PJW6 202 aa2.74□□□□□ -1.97
ATXN3-223ENST00000553686 J3QQQ9 107 aa2.74□□□□□ -1.97
ATXN3-223ENST00000553686 K7ERJ3 54 aa2.74□□□□□ -1.97
ATXN3-223ENST00000553686 TIMM17BO60830 172 aa2.74□□□□□ -1.97
ATXN3-223ENST00000553686 SPINK8P0C7L1 97 aa2.74□□□□□ -1.97
ATXN3-223ENST00000553686 IFITM1P13164 125 aa2.74□□□□□ -1.97
ATXN3-223ENST00000553686 LINC00158P58513 81 aa2.74□□□□□ -1.97
ATXN3-223ENST00000553686 TMEM170BQ5T4T1 132 aa2.74□□□□□ -1.97
ATXN3-223ENST00000553686 SFTA2Q6UW10 78 aa2.74□□□□□ -1.97
ATXN3-223ENST00000553686 TEN1Q86WV5 123 aa2.74□□□□□ -1.97
ATXN3-223ENST00000553686 PRO1854Q9UHT4 67 aa2.74□□□□□ -1.97
ATXN3-223ENST00000553686 TRBV10-3A0A0K0K1G6 114 aa2.73□□□□□ -1.97
ATXN3-223ENST00000553686 COX6CP09669 75 aa2.73□□□□□ -1.97
ATXN3-223ENST00000553686 SCGB1C2P0DMR2 95 aa2.73□□□□□ -1.97
ATXN3-223ENST00000553686 ETDBQ3ZM63 59 aa2.73□□□□□ -1.97
ATXN3-223ENST00000553686 ZNF625Q96I27 306 aaPredicted RBP2.73□□□□□ -1.97
ATXN3-223ENST00000553686 TTTY13Q9BZ97 58 aa2.73□□□□□ -1.97
ATXN3-223ENST00000553686 SPANXCQ9NY87 97 aa2.73□□□□□ -1.97
ATXN3-223ENST00000553686 NCR3O14931 201 aa2.72□□□□□ -1.97
ATXN3-223ENST00000553686 ZNF22P17026 224 aaPredicted RBP2.72□□□□□ -1.97
ATXN3-223ENST00000553686 SPRR1BP22528 89 aa2.72□□□□□ -1.97
ATXN3-223ENST00000553686 PSMB2P49721 201 aa2.72□□□□□ -1.97
ATXN3-223ENST00000553686 ATXN8Q156A1 80 aa2.72□□□□□ -1.97
ATXN3-223ENST00000553686 ST20-AS1Q8NBB2 130 aa2.72□□□□□ -1.97
ATXN3-223ENST00000553686 SPRR2FQ96RM1 72 aa2.72□□□□□ -1.97
ATXN3-223ENST00000553686 NAA38Q9BRA0 125 aaKnown RBP2.72□□□□□ -1.97
ATXN3-223ENST00000553686 TRBV10-2A0A0K0K1G8 114 aa2.71□□□□□ -1.98
ATXN3-223ENST00000553686 FAM240AA0A1B0GVK7 77 aa2.71□□□□□ -1.98
ATXN3-223ENST00000553686 H3BT86 120 aa2.71□□□□□ -1.98
ATXN3-223ENST00000553686 SPRR2DP22532 72 aa2.71□□□□□ -1.98
ATXN3-223ENST00000553686 Q96NJ1 140 aa2.71□□□□□ -1.98
ATXN3-223ENST00000553686 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
ATXN3-223ENST00000553686 ACYP1P07311 99 aa2.7□□□□□ -1.98
ATXN3-223ENST00000553686 MUSTN1Q8IVN3 82 aa2.7□□□□□ -1.98
ATXN3-223ENST00000553686 ANKRD29Q8N6D5 301 aa2.7□□□□□ -1.98
ATXN3-223ENST00000553686 TSPEAR-AS2P59090 65 aa2.69□□□□□ -1.98
ATXN3-223ENST00000553686 C9JAW5 83 aa2.68□□□□□ -1.98
ATXN3-223ENST00000553686 LST1O00453 97 aa2.68□□□□□ -1.98
ATXN3-223ENST00000553686 IGFL1Q6UW32 110 aa2.68□□□□□ -1.98
ATXN3-223ENST00000553686 IMUPQ9GZP8 106 aa2.68□□□□□ -1.98
ATXN3-223ENST00000553686 A8MUU9 505 aa2.67□□□□□ -1.98
ATXN3-223ENST00000553686 SNCGO76070 127 aa2.67□□□□□ -1.98
ATXN3-223ENST00000553686 TRACP01848 142 aa2.67□□□□□ -1.98
ATXN3-223ENST00000553686 MEIG1Q5JSS6 88 aa2.67□□□□□ -1.98
ATXN3-223ENST00000553686 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
ATXN3-223ENST00000553686 TRAV13-2A0A0B4J235 113 aa2.66□□□□□ -1.98
ATXN3-223ENST00000553686 HRES1P13985 223 aa2.66□□□□□ -1.98
ATXN3-223ENST00000553686 S100A7L2Q5SY68 101 aa2.66□□□□□ -1.98
ATXN3-223ENST00000553686 TRAV23DV6A0A075B6W5 121 aa2.65□□□□□ -1.99
ATXN3-223ENST00000553686 TRBV7-7A0A0K0K1E9 115 aa2.65□□□□□ -1.99
ATXN3-223ENST00000553686 H0YGX0 51 aa2.65□□□□□ -1.99
ATXN3-223ENST00000553686 ZNF73O43830 326 aaPredicted RBP2.65□□□□□ -1.99
ATXN3-223ENST00000553686 MT-ATP8P03928 68 aa2.65□□□□□ -1.99
ATXN3-223ENST00000553686 Q5VV11 94 aa2.65□□□□□ -1.99
ATXN3-223ENST00000553686 LINC00308Q8TCZ7 52 aa2.65□□□□□ -1.99
ATXN3-223ENST00000553686 ANAPC13Q9BS18 74 aa2.65□□□□□ -1.99
ATXN3-223ENST00000553686 TEX49A0A1B0GTD5 131 aa2.64□□□□□ -1.99
ATXN3-223ENST00000553686 A0A1B0GX51 115 aa2.64□□□□□ -1.99
ATXN3-223ENST00000553686 LINC00643Q86TS7 51 aa2.64□□□□□ -1.99
ATXN3-223ENST00000553686 MIR7-3HGQ8N6C7 128 aa2.64□□□□□ -1.99
ATXN3-223ENST00000553686 DEFB105AQ8NG35 78 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms