RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 TRAV23DV6A0A075B6W5 121 aa2.69□□□□□ -1.98
CKAP4-203ENST00000553039 TRBV10-3A0A0K0K1G6 114 aa2.69□□□□□ -1.98
CKAP4-203ENST00000553039 A0A1B0GVX0 72 aa2.69□□□□□ -1.98
CKAP4-203ENST00000553039 C9JAW5 83 aa2.69□□□□□ -1.98
CKAP4-203ENST00000553039 LST1O00453 97 aa2.69□□□□□ -1.98
CKAP4-203ENST00000553039 SNCGO76070 127 aa2.69□□□□□ -1.98
CKAP4-203ENST00000553039 DNAL4O96015 105 aa2.69□□□□□ -1.98
CKAP4-203ENST00000553039 IGLV6-57P01721 117 aa2.69□□□□□ -1.98
CKAP4-203ENST00000553039 TRACP01848 142 aa2.69□□□□□ -1.98
CKAP4-203ENST00000553039 LCE1DQ5T752 114 aa2.69□□□□□ -1.98
CKAP4-203ENST00000553039 Q8NDZ9 215 aa2.69□□□□□ -1.98
CKAP4-203ENST00000553039 CLEC2BQ92478 149 aa2.69□□□□□ -1.98
CKAP4-203ENST00000553039 BPY2O14599 106 aa2.68□□□□□ -1.98
CKAP4-203ENST00000553039 ZNF73O43830 326 aaPredicted RBP2.68□□□□□ -1.98
CKAP4-203ENST00000553039 MT2AP02795 61 aa2.68□□□□□ -1.98
CKAP4-203ENST00000553039 PRO0461Q9UI25 63 aa2.68□□□□□ -1.98
CKAP4-203ENST00000553039 TRBV7-6A0A0J9YX20 115 aa2.67□□□□□ -1.98
CKAP4-203ENST00000553039 A0A1B0GX51 115 aa2.67□□□□□ -1.98
CKAP4-203ENST00000553039 C8orf87E5RJ46 101 aa2.67□□□□□ -1.98
CKAP4-203ENST00000553039 H3BT86 120 aa2.67□□□□□ -1.98
CKAP4-203ENST00000553039 RPL37P61927 97 aaKnown RBP2.67□□□□□ -1.98
CKAP4-203ENST00000553039 ANKRD29Q8N6D5 301 aa2.67□□□□□ -1.98
CKAP4-203ENST00000553039 LIMD2Q9BT23 127 aa2.67□□□□□ -1.98
CKAP4-203ENST00000553039 COX7BP24311 80 aa2.66□□□□□ -1.98
CKAP4-203ENST00000553039 ELOF1P60002 83 aaKnown RBP2.66□□□□□ -1.98
CKAP4-203ENST00000553039 MOBPQ13875 183 aa2.66□□□□□ -1.98
CKAP4-203ENST00000553039 TEN1Q86WV5 123 aa2.66□□□□□ -1.98
CKAP4-203ENST00000553039 SMCR5Q8TEV8 140 aa2.66□□□□□ -1.98
CKAP4-203ENST00000553039 KCNQ1DNQ9H478 68 aa2.66□□□□□ -1.98
CKAP4-203ENST00000553039 C8orf17Q9NRJ1 99 aa2.66□□□□□ -1.98
CKAP4-203ENST00000553039 RBM12B-AS1Q9P1G2 102 aa2.66□□□□□ -1.98
CKAP4-203ENST00000553039 hADV29S1A0JD25 119 aa2.65□□□□□ -1.99
CKAP4-203ENST00000553039 J3QR89 54 aa2.65□□□□□ -1.99
CKAP4-203ENST00000553039 K7ERU9 68 aa2.65□□□□□ -1.99
CKAP4-203ENST00000553039 ETDBQ3ZM63 59 aa2.65□□□□□ -1.99
CKAP4-203ENST00000553039 LINC00483Q53H64 154 aa2.65□□□□□ -1.99
CKAP4-203ENST00000553039 LINC00575Q6W349 94 aa2.65□□□□□ -1.99
CKAP4-203ENST00000553039 ATP11AUNQ6ZP68 121 aa2.65□□□□□ -1.99
CKAP4-203ENST00000553039 ORMDL1Q9P0S3 153 aa2.65□□□□□ -1.99
CKAP4-203ENST00000553039 NEBP20929 6669 aa2.64□□□□□ -1.99
CKAP4-203ENST00000553039 ETDCA0A1B0GVM5 59 aa2.64□□□□□ -1.99
CKAP4-203ENST00000553039 H3BQ85 93 aa2.64□□□□□ -1.99
CKAP4-203ENST00000553039 MT1FP04733 61 aa2.64□□□□□ -1.99
CKAP4-203ENST00000553039 BAALC-AS2P0C853 105 aa2.64□□□□□ -1.99
CKAP4-203ENST00000553039 SPRR1AP35321 89 aa2.64□□□□□ -1.99
CKAP4-203ENST00000553039 OCIAD2Q56VL3 154 aa2.64□□□□□ -1.99
CKAP4-203ENST00000553039 Q6ZRX8 168 aa2.64□□□□□ -1.99
CKAP4-203ENST00000553039 PPDPFLQ8WWR9 84 aa2.64□□□□□ -1.99
CKAP4-203ENST00000553039 FLGP20930 4061 aaPredicted RBP2.63□□□□□ -1.99
CKAP4-203ENST00000553039 TMEM256-PLSCR3K7ERE1 68 aa2.63□□□□□ -1.99
CKAP4-203ENST00000553039 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.63□□□□□ -1.99
CKAP4-203ENST00000553039 Q6ZQY7 126 aa2.63□□□□□ -1.99
CKAP4-203ENST00000553039 KRTAP4-8A0A0G2JLE6 195 aa2.62□□□□□ -1.99
CKAP4-203ENST00000553039 TEX49A0A1B0GTD5 131 aa2.62□□□□□ -1.99
CKAP4-203ENST00000553039 C9orf153Q5TBE3 101 aa2.62□□□□□ -1.99
CKAP4-203ENST00000553039 JMJD7-PLA2G4BH0Y9G9 81 aa2.61□□□□□ -1.99
CKAP4-203ENST00000553039 LAMTOR3Q9UHA4 124 aa2.61□□□□□ -1.99
CKAP4-203ENST00000553039 OBSCN-AS1Q96MR7 158 aa2.6□□□□□ -1.99
CKAP4-203ENST00000553039 Q9BRP9 147 aa2.6□□□□□ -1.99
CKAP4-203ENST00000553039 KRTAP2-2Q9BYT5 123 aa2.6□□□□□ -1.99
CKAP4-203ENST00000553039 KRTAP2-1Q9BYU5 128 aa2.6□□□□□ -1.99
CKAP4-203ENST00000553039 IGLV5-48A0A075B6I7 105 aa2.59□□□□□ -1.99
CKAP4-203ENST00000553039 A0A1B0GV72 72 aa2.59□□□□□ -1.99
CKAP4-203ENST00000553039 ACYP1P07311 99 aa2.59□□□□□ -1.99
CKAP4-203ENST00000553039 RBM3P98179 157 aaKnown RBP2.59□□□□□ -1.99
CKAP4-203ENST00000553039 C1orf195Q5TG92 126 aa2.59□□□□□ -1.99
CKAP4-203ENST00000553039 DEFB105AQ8NG35 78 aa2.59□□□□□ -1.99
CKAP4-203ENST00000553039 C20orf166-AS1Q96NR2 134 aa2.59□□□□□ -1.99
CKAP4-203ENST00000553039 DSCR8Q96T75 97 aa2.59□□□□□ -1.99
CKAP4-203ENST00000553039 VPS25Q9BRG1 176 aa2.59□□□□□ -1.99
CKAP4-203ENST00000553039 ANAPC13Q9BS18 74 aa2.59□□□□□ -1.99
CKAP4-203ENST00000553039 C14orf132Q9NPU4 83 aa2.59□□□□□ -1.99
CKAP4-203ENST00000553039 LOC110117498A0A087WWA1 95 aa2.58□□□□□ -2
CKAP4-203ENST00000553039 FAM236DA0A1B0GTK5 79 aa2.58□□□□□ -2
CKAP4-203ENST00000553039 F8WEM9 126 aa2.58□□□□□ -2
CKAP4-203ENST00000553039 FAM236CP0DP71 79 aa2.58□□□□□ -2
CKAP4-203ENST00000553039 PDE6GP18545 87 aa2.58□□□□□ -2
CKAP4-203ENST00000553039 MP68P56378 58 aa2.58□□□□□ -2
CKAP4-203ENST00000553039 HRCT1Q6UXD1 115 aa2.58□□□□□ -2
CKAP4-203ENST00000553039 ERC2-IT1O76042 136 aa2.57□□□□□ -2
CKAP4-203ENST00000553039 CCKP06307 115 aa2.57□□□□□ -2
CKAP4-203ENST00000553039 DSCR10P59022 87 aa2.57□□□□□ -2
CKAP4-203ENST00000553039 ST20-AS1Q8NBB2 130 aa2.57□□□□□ -2
CKAP4-203ENST00000553039 TRBV7-4A0A0J9YYF1 115 aa2.56□□□□□ -2
CKAP4-203ENST00000553039 SPRR1BP22528 89 aa2.56□□□□□ -2
CKAP4-203ENST00000553039 KRTAP5-9P26371 169 aa2.56□□□□□ -2
CKAP4-203ENST00000553039 LUZP6Q538Z0 58 aa2.56□□□□□ -2
CKAP4-203ENST00000553039 Q5W150 140 aa2.56□□□□□ -2
CKAP4-203ENST00000553039 Q5XG85 94 aa2.56□□□□□ -2
CKAP4-203ENST00000553039 Q6ZQT0 140 aa2.56□□□□□ -2
CKAP4-203ENST00000553039 KMT2DO14686 5537 aa2.56□□□□□ -2
CKAP4-203ENST00000553039 KRTAP4-9Q9BYQ8 210 aa2.55□□□□□ -2
CKAP4-203ENST00000553039 A0A1B0GW54 56 aa2.54□□□□□ -2
CKAP4-203ENST00000553039 DEFB116Q30KQ4 102 aa2.54□□□□□ -2
CKAP4-203ENST00000553039 Q6JHZ5 121 aa2.54□□□□□ -2
CKAP4-203ENST00000553039 SPANXA2-OT1Q8N9U9 137 aa2.54□□□□□ -2
CKAP4-203ENST00000553039 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
CKAP4-203ENST00000553039 UBL5Q9BZL1 73 aa2.54□□□□□ -2
CKAP4-203ENST00000553039 A6NN06 94 aa2.53□□□□□ -2
CKAP4-203ENST00000553039 ATP5EP2Q5VTU8 51 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms