RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 TRBV7-7A0A0K0K1E9 115 aa4.29□□□□□ -1.72
NPAS3-213ENST00000552874 A0A1W2PNM2 257 aa4.29□□□□□ -1.72
NPAS3-213ENST00000552874 H3BQ85 93 aa4.29□□□□□ -1.72
NPAS3-213ENST00000552874 ATXN8Q156A1 80 aa4.29□□□□□ -1.72
NPAS3-213ENST00000552874 TPRXLQ17RH7 258 aa4.29□□□□□ -1.72
NPAS3-213ENST00000552874 HRCT1Q6UXD1 115 aa4.29□□□□□ -1.72
NPAS3-213ENST00000552874 FP248Q71RG6 208 aaPredicted RBP4.29□□□□□ -1.72
NPAS3-213ENST00000552874 TRBV20-1A0A075B6N2 111 aa4.28□□□□□ -1.72
NPAS3-213ENST00000552874 J3KT08 172 aa4.28□□□□□ -1.72
NPAS3-213ENST00000552874 TMEM256-PLSCR3K7ERE1 68 aa4.28□□□□□ -1.72
NPAS3-213ENST00000552874 SNCGO76070 127 aa4.28□□□□□ -1.72
NPAS3-213ENST00000552874 SCGB1C2P0DMR2 95 aa4.28□□□□□ -1.72
NPAS3-213ENST00000552874 KRTAP13-3Q3SY46 172 aa4.28□□□□□ -1.72
NPAS3-213ENST00000552874 ASB16-AS1Q495Z4 193 aa4.28□□□□□ -1.72
NPAS3-213ENST00000552874 PRR4Q16378 134 aa4.27□□□□□ -1.73
NPAS3-213ENST00000552874 C1orf195Q5TG92 126 aa4.27□□□□□ -1.73
NPAS3-213ENST00000552874 OBSCN-AS1Q96MR7 158 aa4.27□□□□□ -1.73
NPAS3-213ENST00000552874 LIMD2Q9BT23 127 aa4.27□□□□□ -1.73
NPAS3-213ENST00000552874 BAALC-AS2P0C853 105 aa4.26□□□□□ -1.73
NPAS3-213ENST00000552874 Q96NJ1 140 aa4.26□□□□□ -1.73
NPAS3-213ENST00000552874 FAT4Q6V0I7 4981 aa4.26□□□□□ -1.73
NPAS3-213ENST00000552874 IGLV7-46A0A075B6I9 117 aa4.25□□□□□ -1.73
NPAS3-213ENST00000552874 FAM240AA0A1B0GVK7 77 aa4.25□□□□□ -1.73
NPAS3-213ENST00000552874 C9JAW5 83 aa4.25□□□□□ -1.73
NPAS3-213ENST00000552874 ANKRD29Q8N6D5 301 aa4.25□□□□□ -1.73
NPAS3-213ENST00000552874 IMUPQ9GZP8 106 aa4.25□□□□□ -1.73
NPAS3-213ENST00000552874 H3BT86 120 aa4.24□□□□□ -1.73
NPAS3-213ENST00000552874 KRTAP3-1Q9BYR8 98 aa4.24□□□□□ -1.73
NPAS3-213ENST00000552874 UQCRQO14949 82 aa4.23□□□□□ -1.73
NPAS3-213ENST00000552874 Q6ZQT0 140 aa4.23□□□□□ -1.73
NPAS3-213ENST00000552874 A0A087WSZ3 146 aa4.22□□□□□ -1.73
NPAS3-213ENST00000552874 LOC110117498A0A087WWA1 95 aa4.22□□□□□ -1.73
NPAS3-213ENST00000552874 CCKP06307 115 aa4.21□□□□□ -1.74
NPAS3-213ENST00000552874 RBM3P98179 157 aaKnown RBP4.21□□□□□ -1.74
NPAS3-213ENST00000552874 JMJD7-PLA2G4BH0Y9G9 81 aa4.2□□□□□ -1.74
NPAS3-213ENST00000552874 LINC00472Q9H8W2 130 aa4.19□□□□□ -1.74
NPAS3-213ENST00000552874 C14orf132Q9NPU4 83 aa4.19□□□□□ -1.74
NPAS3-213ENST00000552874 TMEM258P61165 79 aa4.18□□□□□ -1.74
NPAS3-213ENST00000552874 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
NPAS3-213ENST00000552874 DSCR8Q96T75 97 aa4.18□□□□□ -1.74
NPAS3-213ENST00000552874 ACYP1P07311 99 aa4.17□□□□□ -1.74
NPAS3-213ENST00000552874 COX7CP15954 63 aa4.17□□□□□ -1.74
NPAS3-213ENST00000552874 HIST1H4AP62805 103 aaKnown RBP4.17□□□□□ -1.74
NPAS3-213ENST00000552874 FLGP20930 4061 aaPredicted RBP4.17□□□□□ -1.74
NPAS3-213ENST00000552874 FAM236AA0A1B0GUQ0 79 aa4.15□□□□□ -1.75
NPAS3-213ENST00000552874 FAM236BA0A1B0GV22 79 aa4.15□□□□□ -1.75
NPAS3-213ENST00000552874 A0A1B0GW54 56 aa4.15□□□□□ -1.75
NPAS3-213ENST00000552874 C9orf92A6NGG3 77 aa4.15□□□□□ -1.75
NPAS3-213ENST00000552874 PDE6GP18545 87 aa4.15□□□□□ -1.75
NPAS3-213ENST00000552874 KRTAP4-1Q9BYQ7 146 aa4.15□□□□□ -1.75
NPAS3-213ENST00000552874 PRO0628Q9UI54 55 aa4.15□□□□□ -1.75
NPAS3-213ENST00000552874 KRTAP16-1A8MUX0 517 aa4.14□□□□□ -1.75
NPAS3-213ENST00000552874 ATOX1O00244 68 aa4.14□□□□□ -1.75
NPAS3-213ENST00000552874 LINC00643Q86TS7 51 aa4.14□□□□□ -1.75
NPAS3-213ENST00000552874 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
NPAS3-213ENST00000552874 NOTCH2NLQ7Z3S9 236 aa4.12□□□□□ -1.75
NPAS3-213ENST00000552874 IGKV4-1P06312 121 aa4.11□□□□□ -1.75
NPAS3-213ENST00000552874 RPL37P61927 97 aaKnown RBP4.11□□□□□ -1.75
NPAS3-213ENST00000552874 DEFB116Q30KQ4 102 aa4.11□□□□□ -1.75
NPAS3-213ENST00000552874 C20orf166-AS1Q96NR2 134 aa4.11□□□□□ -1.75
NPAS3-213ENST00000552874 C4orf26Q17RF5 130 aa4.1□□□□□ -1.75
NPAS3-213ENST00000552874 A0A1B0GVX0 72 aa4.09□□□□□ -1.75
NPAS3-213ENST00000552874 A8MUU9 505 aa4.09□□□□□ -1.75
NPAS3-213ENST00000552874 DSCR10P59022 87 aa4.09□□□□□ -1.75
NPAS3-213ENST00000552874 SEC61GP60059 68 aa4.09□□□□□ -1.75
NPAS3-213ENST00000552874 Q75L30 129 aa4.09□□□□□ -1.75
NPAS3-213ENST00000552874 SERP2Q8N6R1 65 aa4.08□□□□□ -1.76
NPAS3-213ENST00000552874 IGKV3D-7A0A0C4DH55 119 aa4.07□□□□□ -1.76
NPAS3-213ENST00000552874 KRTAP19-2Q3LHN2 52 aa4.07□□□□□ -1.76
NPAS3-213ENST00000552874 Q6ZVQ6 151 aa4.07□□□□□ -1.76
NPAS3-213ENST00000552874 LINC00846Q9NV44 126 aa4.07□□□□□ -1.76
NPAS3-213ENST00000552874 A8MWP4 228 aa4.06□□□□□ -1.76
NPAS3-213ENST00000552874 SEC61BP60468 96 aaKnown RBP4.06□□□□□ -1.76
NPAS3-213ENST00000552874 PCOTHQ58A44 107 aa4.06□□□□□ -1.76
NPAS3-213ENST00000552874 V9GYY9 64 aa4.06□□□□□ -1.76
NPAS3-213ENST00000552874 IGHV6-1A0A0B4J1U7 121 aa4.05□□□□□ -1.76
NPAS3-213ENST00000552874 C8orf87E5RJ46 101 aa4.05□□□□□ -1.76
NPAS3-213ENST00000552874 CYSTM1Q9H1C7 97 aa4.05□□□□□ -1.76
NPAS3-213ENST00000552874 SERP1Q9Y6X1 66 aa4.05□□□□□ -1.76
NPAS3-213ENST00000552874 MMP24-AS1A0A0U1RRL7 71 aa4.04□□□□□ -1.76
NPAS3-213ENST00000552874 K7EQZ3 153 aa4.04□□□□□ -1.76
NPAS3-213ENST00000552874 LINC00313P59037 77 aa4.04□□□□□ -1.76
NPAS3-213ENST00000552874 NREPQ16612 68 aa4.04□□□□□ -1.76
NPAS3-213ENST00000552874 PRR15Q8IV56 129 aa4.04□□□□□ -1.76
NPAS3-213ENST00000552874 C8orf17Q9NRJ1 99 aa4.03□□□□□ -1.76
NPAS3-213ENST00000552874 SMIM26A0A096LP01 95 aa4.02□□□□□ -1.77
NPAS3-213ENST00000552874 FAM236DA0A1B0GTK5 79 aa4.02□□□□□ -1.77
NPAS3-213ENST00000552874 FAM236CP0DP71 79 aa4.02□□□□□ -1.77
NPAS3-213ENST00000552874 Q8N9P0 234 aaPredicted RBP4.02□□□□□ -1.77
NPAS3-213ENST00000552874 BPY2O14599 106 aa4□□□□□ -1.77
NPAS3-213ENST00000552874 Q8N9L7 120 aa4□□□□□ -1.77
NPAS3-213ENST00000552874 ATP5EP56381 51 aaPredicted RBP3.99□□□□□ -1.77
NPAS3-213ENST00000552874 ATP5EP2Q5VTU8 51 aa3.99□□□□□ -1.77
NPAS3-213ENST00000552874 UBL5Q9BZL1 73 aa3.99□□□□□ -1.77
NPAS3-213ENST00000552874 NDUFB1O75438 58 aa3.98□□□□□ -1.77
NPAS3-213ENST00000552874 TMEM254Q8TBM7 123 aa3.98□□□□□ -1.77
NPAS3-213ENST00000552874 KRTAP9-8Q9BYQ0 159 aa3.98□□□□□ -1.77
NPAS3-213ENST00000552874 CXCL6P80162 114 aa3.97□□□□□ -1.77
NPAS3-213ENST00000552874 H7BZZ5 65 aa3.96□□□□□ -1.78
NPAS3-213ENST00000552874 KLKP1Q107X0 134 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms