RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 C20orf166-AS1Q96NR2 134 aa5.93□□□□□ -1.46
PTCH1-222ENST00000551425 C9JAW5 83 aa5.92□□□□□ -1.46
PTCH1-222ENST00000551425 H3BMG7 143 aa5.92□□□□□ -1.46
PTCH1-222ENST00000551425 Q6JHZ5 121 aa5.92□□□□□ -1.46
PTCH1-222ENST00000551425 K7EP34 96 aa5.91□□□□□ -1.46
PTCH1-222ENST00000551425 GTF2H5Q6ZYL4 71 aa5.9□□□□□ -1.46
PTCH1-222ENST00000551425 ANKRD29Q8N6D5 301 aa5.9□□□□□ -1.46
PTCH1-222ENST00000551425 H3BT86 120 aa5.89□□□□□ -1.47
PTCH1-222ENST00000551425 MUC12Q9UKN1 5478 aa5.88□□□□□ -1.47
PTCH1-222ENST00000551425 FAM236DA0A1B0GTK5 79 aa5.88□□□□□ -1.47
PTCH1-222ENST00000551425 FAM236CP0DP71 79 aa5.88□□□□□ -1.47
PTCH1-222ENST00000551425 IGFL1Q6UW32 110 aa5.88□□□□□ -1.47
PTCH1-222ENST00000551425 JMJD7-PLA2G4BH0Y9G9 81 aa5.87□□□□□ -1.47
PTCH1-222ENST00000551425 RBM3P98179 157 aaKnown RBP5.87□□□□□ -1.47
PTCH1-222ENST00000551425 Q96NJ1 140 aa5.87□□□□□ -1.47
PTCH1-222ENST00000551425 A0A1B0GV72 72 aa5.85□□□□□ -1.47
PTCH1-222ENST00000551425 A8MUU9 505 aa5.85□□□□□ -1.47
PTCH1-222ENST00000551425 MTURNQ8N3F0 131 aa5.85□□□□□ -1.47
PTCH1-222ENST00000551425 MPLKIPQ8TAP9 179 aa5.85□□□□□ -1.47
PTCH1-222ENST00000551425 DSCR8Q96T75 97 aa5.85□□□□□ -1.47
PTCH1-222ENST00000551425 TEN1Q86WV5 123 aa5.84□□□□□ -1.47
PTCH1-222ENST00000551425 F8W1H4 67 aa5.83□□□□□ -1.48
PTCH1-222ENST00000551425 TRBV7-4A0A0J9YYF1 115 aa5.82□□□□□ -1.48
PTCH1-222ENST00000551425 TRBV7-7A0A0K0K1E9 115 aa5.82□□□□□ -1.48
PTCH1-222ENST00000551425 RBM12B-AS1Q9P1G2 102 aa5.82□□□□□ -1.48
PTCH1-222ENST00000551425 PRO0461Q9UI25 63 aa5.82□□□□□ -1.48
PTCH1-222ENST00000551425 PDE6GP18545 87 aa5.81□□□□□ -1.48
PTCH1-222ENST00000551425 SMCPP49901 116 aaPredicted RBP5.81□□□□□ -1.48
PTCH1-222ENST00000551425 C21orf62-AS1Q17RA5 79 aa5.81□□□□□ -1.48
PTCH1-222ENST00000551425 A0A1B0GV90 55 aa5.8□□□□□ -1.48
PTCH1-222ENST00000551425 A0A1W2PNM2 257 aa5.8□□□□□ -1.48
PTCH1-222ENST00000551425 CCKP06307 115 aa5.8□□□□□ -1.48
PTCH1-222ENST00000551425 LOC110117498A0A087WWA1 95 aa5.79□□□□□ -1.48
PTCH1-222ENST00000551425 HRES1P13985 223 aa5.79□□□□□ -1.48
PTCH1-222ENST00000551425 C14orf132Q9NPU4 83 aa5.79□□□□□ -1.48
PTCH1-222ENST00000551425 KRTAP16-1A8MUX0 517 aa5.78□□□□□ -1.48
PTCH1-222ENST00000551425 Q6ZQT0 140 aa5.78□□□□□ -1.48
PTCH1-222ENST00000551425 VPS25Q9BRG1 176 aa5.78□□□□□ -1.48
PTCH1-222ENST00000551425 SS18L2Q9UHA2 77 aa5.78□□□□□ -1.48
PTCH1-222ENST00000551425 A0A087WSZ3 146 aa5.76□□□□□ -1.49
PTCH1-222ENST00000551425 A0A1B0GW54 56 aa5.76□□□□□ -1.49
PTCH1-222ENST00000551425 ETDBQ3ZM63 59 aa5.73□□□□□ -1.49
PTCH1-222ENST00000551425 A8MWP4 228 aa5.72□□□□□ -1.49
PTCH1-222ENST00000551425 NOTCH2NLQ7Z3S9 236 aa5.72□□□□□ -1.49
PTCH1-222ENST00000551425 Q8N9P0 234 aaPredicted RBP5.72□□□□□ -1.49
PTCH1-222ENST00000551425 MDN1Q9NU22 5596 aa5.71□□□□□ -1.5
PTCH1-222ENST00000551425 KRTAP5-9P26371 169 aa5.68□□□□□ -1.5
PTCH1-222ENST00000551425 KRTAP2-3P0C7H8 128 aa5.67□□□□□ -1.5
PTCH1-222ENST00000551425 NREPQ16612 68 aa5.67□□□□□ -1.5
PTCH1-222ENST00000551425 KRTAP2-4Q9BYR9 128 aa5.67□□□□□ -1.5
PTCH1-222ENST00000551425 LINC00472Q9H8W2 130 aa5.67□□□□□ -1.5
PTCH1-222ENST00000551425 KMT2DO14686 5537 aa5.67□□□□□ -1.5
PTCH1-222ENST00000551425 DSCR10P59022 87 aa5.66□□□□□ -1.5
PTCH1-222ENST00000551425 J3KT08 172 aa5.65□□□□□ -1.5
PTCH1-222ENST00000551425 IGKV4-1P06312 121 aa5.65□□□□□ -1.5
PTCH1-222ENST00000551425 DEFB116Q30KQ4 102 aa5.64□□□□□ -1.51
PTCH1-222ENST00000551425 SIGMAR1Q99720 223 aa5.63□□□□□ -1.51
PTCH1-222ENST00000551425 ACYP1P07311 99 aa5.62□□□□□ -1.51
PTCH1-222ENST00000551425 UBL5Q9BZL1 73 aa5.62□□□□□ -1.51
PTCH1-222ENST00000551425 A6NN06 94 aa5.61□□□□□ -1.51
PTCH1-222ENST00000551425 Q6ZVQ6 151 aa5.61□□□□□ -1.51
PTCH1-222ENST00000551425 NDUFB1O75438 58 aa5.6□□□□□ -1.51
PTCH1-222ENST00000551425 FAM240AA0A1B0GVK7 77 aa5.59□□□□□ -1.51
PTCH1-222ENST00000551425 J3QR89 54 aa5.59□□□□□ -1.51
PTCH1-222ENST00000551425 LINC00313P59037 77 aa5.59□□□□□ -1.51
PTCH1-222ENST00000551425 BPY2O14599 106 aa5.58□□□□□ -1.52
PTCH1-222ENST00000551425 IGHV6-1A0A0B4J1U7 121 aa5.56□□□□□ -1.52
PTCH1-222ENST00000551425 A0A1B0GVX0 72 aa5.56□□□□□ -1.52
PTCH1-222ENST00000551425 C8orf87E5RJ46 101 aa5.56□□□□□ -1.52
PTCH1-222ENST00000551425 IGKV3D-7A0A0C4DH55 119 aa5.54□□□□□ -1.52
PTCH1-222ENST00000551425 PRR15Q8IV56 129 aa5.54□□□□□ -1.52
PTCH1-222ENST00000551425 SPINK7P58062 85 aa5.52□□□□□ -1.53
PTCH1-222ENST00000551425 CXCL6P80162 114 aa5.52□□□□□ -1.53
PTCH1-222ENST00000551425 K7EQZ3 153 aa5.51□□□□□ -1.53
PTCH1-222ENST00000551425 C8orf17Q9NRJ1 99 aa5.51□□□□□ -1.53
PTCH1-222ENST00000551425 K7ERU9 68 aa5.49□□□□□ -1.53
PTCH1-222ENST00000551425 ATP5EP2Q5VTU8 51 aa5.49□□□□□ -1.53
PTCH1-222ENST00000551425 MT1BP07438 61 aa5.48□□□□□ -1.53
PTCH1-222ENST00000551425 LINC00643Q86TS7 51 aa5.48□□□□□ -1.53
PTCH1-222ENST00000551425 Q8N9L7 120 aa5.48□□□□□ -1.53
PTCH1-222ENST00000551425 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
PTCH1-222ENST00000551425 MMP24-AS1A0A0U1RRL7 71 aa5.46□□□□□ -1.54
PTCH1-222ENST00000551425 hDV103S1A0JD37 113 aa5.46□□□□□ -1.54
PTCH1-222ENST00000551425 TMEM254Q8TBM7 123 aa5.46□□□□□ -1.54
PTCH1-222ENST00000551425 ZCCHC13Q8WW36 166 aaKnown RBP5.46□□□□□ -1.54
PTCH1-222ENST00000551425 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.54
PTCH1-222ENST00000551425 KRTAP2-1Q9BYU5 128 aa5.46□□□□□ -1.54
PTCH1-222ENST00000551425 WFDC13Q8IUB5 93 aa5.45□□□□□ -1.54
PTCH1-222ENST00000551425 MRPL34Q9BQ48 92 aaKnown RBP5.44□□□□□ -1.54
PTCH1-222ENST00000551425 HCG22E2RYF7 251 aa5.43□□□□□ -1.54
PTCH1-222ENST00000551425 CASC2Q6XLA1 102 aa5.43□□□□□ -1.54
PTCH1-222ENST00000551425 Q5VV11 94 aa5.42□□□□□ -1.54
PTCH1-222ENST00000551425 HIST1H4AP62805 103 aaKnown RBP5.41□□□□□ -1.54
PTCH1-222ENST00000551425 SPRR2EP22531 72 aa5.4□□□□□ -1.54
PTCH1-222ENST00000551425 SPRR2BP35325 72 aa5.4□□□□□ -1.54
PTCH1-222ENST00000551425 SPRR2AP35326 72 aa5.4□□□□□ -1.54
PTCH1-222ENST00000551425 NDUFS5O43920 106 aa5.39□□□□□ -1.55
PTCH1-222ENST00000551425 KRTAP19-8Q3LI54 63 aa5.39□□□□□ -1.55
PTCH1-222ENST00000551425 H1FX-AS1Q4G0G2 97 aa5.38□□□□□ -1.55
PTCH1-222ENST00000551425 A0A087WVE0 104 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms