RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 IGHV6-1A0A0B4J1U7 121 aa3.33□□□□□ -1.88
PRPF40B-214ENST00000551320 H3BMG7 143 aa3.33□□□□□ -1.88
PRPF40B-214ENST00000551320 LINC00313P59037 77 aa3.33□□□□□ -1.88
PRPF40B-214ENST00000551320 TEN1Q86WV5 123 aa3.33□□□□□ -1.88
PRPF40B-214ENST00000551320 HIST3H2BBQ8N257 126 aa3.33□□□□□ -1.88
PRPF40B-214ENST00000551320 HIST1H2BLQ99880 126 aa3.33□□□□□ -1.88
PRPF40B-214ENST00000551320 C14orf144Q96I85 54 aa3.32□□□□□ -1.88
PRPF40B-214ENST00000551320 SS18L2Q9UHA2 77 aa3.32□□□□□ -1.88
PRPF40B-214ENST00000551320 BVES-AS1Q5T3Y7 98 aa3.31□□□□□ -1.88
PRPF40B-214ENST00000551320 HSBP1L1C9JCN9 74 aa3.3□□□□□ -1.88
PRPF40B-214ENST00000551320 RAB37Q96AX2 223 aa3.3□□□□□ -1.88
PRPF40B-214ENST00000551320 RBM12B-AS1Q9P1G2 102 aa3.3□□□□□ -1.88
PRPF40B-214ENST00000551320 NEBP20929 6669 aa3.29□□□□□ -1.88
PRPF40B-214ENST00000551320 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
PRPF40B-214ENST00000551320 PPDPFLQ8WWR9 84 aa3.29□□□□□ -1.88
PRPF40B-214ENST00000551320 COX8AP10176 69 aa3.28□□□□□ -1.88
PRPF40B-214ENST00000551320 S100A2P29034 98 aa3.28□□□□□ -1.88
PRPF40B-214ENST00000551320 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
PRPF40B-214ENST00000551320 K7ERJ3 54 aa3.27□□□□□ -1.89
PRPF40B-214ENST00000551320 SPINK7P58062 85 aa3.27□□□□□ -1.89
PRPF40B-214ENST00000551320 C2orf91Q6ZV80 131 aa3.27□□□□□ -1.89
PRPF40B-214ENST00000551320 ANKRD29Q8N6D5 301 aa3.27□□□□□ -1.89
PRPF40B-214ENST00000551320 VPS25Q9BRG1 176 aa3.27□□□□□ -1.89
PRPF40B-214ENST00000551320 LINC00472Q9H8W2 130 aa3.27□□□□□ -1.89
PRPF40B-214ENST00000551320 FXYD2P54710 66 aa3.26□□□□□ -1.89
PRPF40B-214ENST00000551320 H0YGX0 51 aa3.25□□□□□ -1.89
PRPF40B-214ENST00000551320 CCKP06307 115 aa3.25□□□□□ -1.89
PRPF40B-214ENST00000551320 CEND1Q8N111 149 aa3.25□□□□□ -1.89
PRPF40B-214ENST00000551320 A0A0B4J2C4 111 aa3.24□□□□□ -1.89
PRPF40B-214ENST00000551320 SPATA45Q537H7 98 aa3.24□□□□□ -1.89
PRPF40B-214ENST00000551320 WFDC13Q8IUB5 93 aa3.24□□□□□ -1.89
PRPF40B-214ENST00000551320 ZCCHC13Q8WW36 166 aaKnown RBP3.24□□□□□ -1.89
PRPF40B-214ENST00000551320 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
PRPF40B-214ENST00000551320 A0A1B0GVX0 72 aa3.23□□□□□ -1.89
PRPF40B-214ENST00000551320 TRACP01848 142 aa3.23□□□□□ -1.89
PRPF40B-214ENST00000551320 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
PRPF40B-214ENST00000551320 PRO1854Q9UHT4 67 aa3.23□□□□□ -1.89
PRPF40B-214ENST00000551320 TRBV7-4A0A0J9YYF1 115 aa3.22□□□□□ -1.89
PRPF40B-214ENST00000551320 S100A6P06703 90 aa3.22□□□□□ -1.89
PRPF40B-214ENST00000551320 Q6ZVQ6 151 aa3.22□□□□□ -1.89
PRPF40B-214ENST00000551320 DLEU1O43261 78 aa3.21□□□□□ -1.9
PRPF40B-214ENST00000551320 SNCGO76070 127 aa3.21□□□□□ -1.9
PRPF40B-214ENST00000551320 PSMB2P49721 201 aa3.21□□□□□ -1.9
PRPF40B-214ENST00000551320 ORMDL1Q9P0S3 153 aa3.21□□□□□ -1.9
PRPF40B-214ENST00000551320 HIGD1BQ9P298 99 aa3.2□□□□□ -1.9
PRPF40B-214ENST00000551320 DNAL4O96015 105 aa3.19□□□□□ -1.9
PRPF40B-214ENST00000551320 RBM3P98179 157 aaKnown RBP3.19□□□□□ -1.9
PRPF40B-214ENST00000551320 LYRM7Q5U5X0 104 aa3.19□□□□□ -1.9
PRPF40B-214ENST00000551320 MTURNQ8N3F0 131 aa3.19□□□□□ -1.9
PRPF40B-214ENST00000551320 VAMP8Q9BV40 100 aa3.18□□□□□ -1.9
PRPF40B-214ENST00000551320 A0A1B0GX51 115 aa3.17□□□□□ -1.9
PRPF40B-214ENST00000551320 A8MWP4 228 aa3.17□□□□□ -1.9
PRPF40B-214ENST00000551320 C8orf87E5RJ46 101 aa3.17□□□□□ -1.9
PRPF40B-214ENST00000551320 NAA38Q9BRA0 125 aaKnown RBP3.17□□□□□ -1.9
PRPF40B-214ENST00000551320 LINC00846Q9NV44 126 aa3.17□□□□□ -1.9
PRPF40B-214ENST00000551320 MDN1Q9NU22 5596 aa3.17□□□□□ -1.9
PRPF40B-214ENST00000551320 IGKV3D-7A0A0C4DH55 119 aa3.16□□□□□ -1.9
PRPF40B-214ENST00000551320 TMEM256-PLSCR3K7ERE1 68 aa3.16□□□□□ -1.9
PRPF40B-214ENST00000551320 C8orf17Q9NRJ1 99 aa3.16□□□□□ -1.9
PRPF40B-214ENST00000551320 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
PRPF40B-214ENST00000551320 BAALC-AS2P0C853 105 aa3.14□□□□□ -1.91
PRPF40B-214ENST00000551320 Q6ZQT0 140 aa3.14□□□□□ -1.91
PRPF40B-214ENST00000551320 SCGB1C2P0DMR2 95 aa3.13□□□□□ -1.91
PRPF40B-214ENST00000551320 S100A1P23297 94 aa3.13□□□□□ -1.91
PRPF40B-214ENST00000551320 H1FX-AS1Q4G0G2 97 aa3.13□□□□□ -1.91
PRPF40B-214ENST00000551320 DSCR8Q96T75 97 aa3.13□□□□□ -1.91
PRPF40B-214ENST00000551320 OCR1Q9BZK8 76 aa3.13□□□□□ -1.91
PRPF40B-214ENST00000551320 KMT2DO14686 5537 aa3.13□□□□□ -1.91
PRPF40B-214ENST00000551320 C9JAW5 83 aa3.12□□□□□ -1.91
PRPF40B-214ENST00000551320 MT1BP07438 61 aa3.12□□□□□ -1.91
PRPF40B-214ENST00000551320 HSD52Q0P140 79 aa3.12□□□□□ -1.91
PRPF40B-214ENST00000551320 Q5W150 140 aa3.12□□□□□ -1.91
PRPF40B-214ENST00000551320 A6NN06 94 aa3.11□□□□□ -1.91
PRPF40B-214ENST00000551320 NDUFS5O43920 106 aa3.11□□□□□ -1.91
PRPF40B-214ENST00000551320 NDUFB1O75438 58 aa3.11□□□□□ -1.91
PRPF40B-214ENST00000551320 C5orf47Q569G3 176 aa3.11□□□□□ -1.91
PRPF40B-214ENST00000551320 PYY3Q5JQD4 70 aa3.11□□□□□ -1.91
PRPF40B-214ENST00000551320 MMP24-AS1A0A0U1RRL7 71 aa3.1□□□□□ -1.91
PRPF40B-214ENST00000551320 J3KT08 172 aa3.1□□□□□ -1.91
PRPF40B-214ENST00000551320 COX6CP09669 75 aa3.1□□□□□ -1.91
PRPF40B-214ENST00000551320 C4orf26Q17RF5 130 aa3.1□□□□□ -1.91
PRPF40B-214ENST00000551320 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
PRPF40B-214ENST00000551320 C14orf132Q9NPU4 83 aa3.1□□□□□ -1.91
PRPF40B-214ENST00000551320 K7EQZ3 153 aa3.08□□□□□ -1.92
PRPF40B-214ENST00000551320 PRR15Q8IV56 129 aa3.08□□□□□ -1.92
PRPF40B-214ENST00000551320 Q8N9L7 120 aa3.08□□□□□ -1.92
PRPF40B-214ENST00000551320 FAM236AA0A1B0GUQ0 79 aa3.07□□□□□ -1.92
PRPF40B-214ENST00000551320 FAM236BA0A1B0GV22 79 aa3.07□□□□□ -1.92
PRPF40B-214ENST00000551320 H3BQ85 93 aa3.07□□□□□ -1.92
PRPF40B-214ENST00000551320 MRPL34Q9BQ48 92 aaKnown RBP3.07□□□□□ -1.92
PRPF40B-214ENST00000551320 KRTAP10-7P60409 375 aaPredicted RBP3.06□□□□□ -1.92
PRPF40B-214ENST00000551320 hDV103S1A0JD37 113 aa3.05□□□□□ -1.92
PRPF40B-214ENST00000551320 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
PRPF40B-214ENST00000551320 NREPQ16612 68 aa3.05□□□□□ -1.92
PRPF40B-214ENST00000551320 TMEM254Q8TBM7 123 aa3.05□□□□□ -1.92
PRPF40B-214ENST00000551320 LOC110117498A0A087WWA1 95 aa3.04□□□□□ -1.92
PRPF40B-214ENST00000551320 KRTAP10-5P60370 271 aa3.04□□□□□ -1.92
PRPF40B-214ENST00000551320 Q5VV11 94 aa3.04□□□□□ -1.92
PRPF40B-214ENST00000551320 UQCR10Q9UDW1 63 aa3.03□□□□□ -1.92
PRPF40B-214ENST00000551320 BPY2O14599 106 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms