RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 Q5W150 140 aa7.28□□□□□ -1.24
VDR-208ENST00000550325 LINC01554Q52M75 96 aa7.26□□□□□ -1.25
VDR-208ENST00000550325 H3BS24 57 aa7.25□□□□□ -1.25
VDR-208ENST00000550325 C14orf177Q52M58 125 aa7.25□□□□□ -1.25
VDR-208ENST00000550325 CIRBP-AS1Q8TBR5 109 aa7.25□□□□□ -1.25
VDR-208ENST00000550325 DYNC2H1Q8NCM8 4307 aaKnown RBP7.22□□□□□ -1.25
VDR-208ENST00000550325 MIR22HGQ0VDD5 57 aa7.22□□□□□ -1.25
VDR-208ENST00000550325 DNAH10Q8IVF4 4471 aa7.21□□□□□ -1.25
VDR-208ENST00000550325 ASB16-AS1Q495Z4 193 aa7.21□□□□□ -1.26
VDR-208ENST00000550325 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.2□□□□□ -1.26
VDR-208ENST00000550325 SPINK1P00995 79 aa7.19□□□□□ -1.26
VDR-208ENST00000550325 CSAG1Q6PB30 78 aa7.19□□□□□ -1.26
VDR-208ENST00000550325 LY6G6CO95867 125 aa7.18□□□□□ -1.26
VDR-208ENST00000550325 UQCR11O14957 56 aa7.17□□□□□ -1.26
VDR-208ENST00000550325 PLA2G1BP04054 148 aaKnown RBP7.17□□□□□ -1.26
VDR-208ENST00000550325 ZNF706Q9Y5V0 76 aaPredicted RBP7.17□□□□□ -1.26
VDR-208ENST00000550325 IGKV2D-30A0A075B6S6 120 aa7.16□□□□□ -1.26
VDR-208ENST00000550325 IGKV2-30P06310 120 aa7.16□□□□□ -1.26
VDR-208ENST00000550325 LYSTQ99698 3801 aa7.16□□□□□ -1.26
VDR-208ENST00000550325 WWC2-AS2Q96NR7 200 aa7.15□□□□□ -1.26
VDR-208ENST00000550325 KRTAP13-1Q8IUC0 172 aa7.14□□□□□ -1.27
VDR-208ENST00000550325 DNAH7Q8WXX0 4024 aa7.14□□□□□ -1.27
VDR-208ENST00000550325 PSORS1C2Q9UIG4 136 aa7.14□□□□□ -1.27
VDR-208ENST00000550325 RTL8CO15255 209 aa7.13□□□□□ -1.27
VDR-208ENST00000550325 SPATA8Q6RVD6 105 aa7.11□□□□□ -1.27
VDR-208ENST00000550325 DMAC1Q96GE9 116 aa7.11□□□□□ -1.27
VDR-208ENST00000550325 PRKDCP78527 4128 aaKnown RBP7.09□□□□□ -1.27
VDR-208ENST00000550325 LINC00483Q53H64 154 aa7.07□□□□□ -1.28
VDR-208ENST00000550325 NBDYA0A0U1RRE5 68 aa7.06□□□□□ -1.28
VDR-208ENST00000550325 FAM229AH3BQW9 127 aa7.06□□□□□ -1.28
VDR-208ENST00000550325 ZNF861PO60384 105 aa7.06□□□□□ -1.28
VDR-208ENST00000550325 SPACA4Q8TDM5 124 aa7.06□□□□□ -1.28
VDR-208ENST00000550325 IGLV5-52A0A0A0MRZ9 124 aa7.04□□□□□ -1.28
VDR-208ENST00000550325 FLG2Q5D862 2391 aaPredicted RBP7.04□□□□□ -1.28
VDR-208ENST00000550325 APLNQ9ULZ1 77 aa7.04□□□□□ -1.28
VDR-208ENST00000550325 KRTAP13-3Q3SY46 172 aa7.03□□□□□ -1.28
VDR-208ENST00000550325 Q8N1X5 172 aa7□□□□□ -1.29
VDR-208ENST00000550325 NUPR2A6NF83 97 aa7□□□□□ -1.29
VDR-208ENST00000550325 DNAH9Q9NYC9 4486 aa6.99□□□□□ -1.29
VDR-208ENST00000550325 C1orf134Q5TEV5 83 aa6.98□□□□□ -1.29
VDR-208ENST00000550325 CRIPTQ9P021 101 aa6.96□□□□□ -1.29
VDR-208ENST00000550325 A0A087WTM6 91 aa6.96□□□□□ -1.3
VDR-208ENST00000550325 IGLV7-43P04211 117 aa6.94□□□□□ -1.3
VDR-208ENST00000550325 HUWE1Q7Z6Z7 4374 aaKnown RBP6.93□□□□□ -1.3
VDR-208ENST00000550325 Q6ZRN7 208 aaPredicted RBP6.93□□□□□ -1.3
VDR-208ENST00000550325 DNHD1Q96M86 4753 aa6.91□□□□□ -1.3
VDR-208ENST00000550325 FRAS1Q86XX4 4008 aa6.91□□□□□ -1.3
VDR-208ENST00000550325 FBN3Q75N90 2809 aa6.89□□□□□ -1.31
VDR-208ENST00000550325 SSBP3-AS1Q7Z2R9 100 aa6.89□□□□□ -1.31
VDR-208ENST00000550325 ALMS1Q8TCU4 4167 aa6.86□□□□□ -1.31
VDR-208ENST00000550325 MEGF8Q7Z7M0 2845 aa6.85□□□□□ -1.31
VDR-208ENST00000550325 DMBT1Q9UGM3 2413 aaPredicted RBP6.82□□□□□ -1.32
VDR-208ENST00000550325 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
VDR-208ENST00000550325 Q6ZSA8 131 aa6.8□□□□□ -1.32
VDR-208ENST00000550325 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
VDR-208ENST00000550325 H0YAA0 97 aa6.8□□□□□ -1.32
VDR-208ENST00000550325 DNAH8Q96JB1 4490 aa6.8□□□□□ -1.32
VDR-208ENST00000550325 LINC00304Q8N9R0 145 aa6.8□□□□□ -1.32
VDR-208ENST00000550325 DNAH6Q9C0G6 4158 aa6.79□□□□□ -1.32
VDR-208ENST00000550325 A0A1B0GU33 70 aa6.79□□□□□ -1.32
VDR-208ENST00000550325 KRTAP13-2Q52LG2 175 aa6.79□□□□□ -1.32
VDR-208ENST00000550325 ROMO1P60602 79 aa6.78□□□□□ -1.32
VDR-208ENST00000550325 KRTAP16-1A8MUX0 517 aa6.78□□□□□ -1.32
VDR-208ENST00000550325 DNAH2Q9P225 4427 aa6.76□□□□□ -1.33
VDR-208ENST00000550325 A8MUU9 505 aa6.76□□□□□ -1.33
VDR-208ENST00000550325 K7ERS5 55 aa6.75□□□□□ -1.33
VDR-208ENST00000550325 PLECQ15149 4684 aaKnown RBP6.74□□□□□ -1.33
VDR-208ENST00000550325 STARD9Q9P2P6 4700 aa6.73□□□□□ -1.33
VDR-208ENST00000550325 KRTAP21-3Q3LHN1 58 aa6.73□□□□□ -1.33
VDR-208ENST00000550325 HECTD4Q9Y4D8 3996 aa6.72□□□□□ -1.33
VDR-208ENST00000550325 C9orf92A6NGG3 77 aa6.71□□□□□ -1.33
VDR-208ENST00000550325 SPINT4Q6UDR6 99 aa6.68□□□□□ -1.34
VDR-208ENST00000550325 H1FX-AS1Q4G0G2 97 aa6.68□□□□□ -1.34
VDR-208ENST00000550325 PKD1P98161 4303 aa6.68□□□□□ -1.34
VDR-208ENST00000550325 DNAH17Q9UFH2 4485 aa6.68□□□□□ -1.34
VDR-208ENST00000550325 VPS13DQ5THJ4 4388 aa6.67□□□□□ -1.34
VDR-208ENST00000550325 KRTAP10-2P60368 255 aa6.67□□□□□ -1.34
VDR-208ENST00000550325 SMR3BP02814 79 aaPredicted RBP6.65□□□□□ -1.34
VDR-208ENST00000550325 A0A0D9SG42 100 aa6.64□□□□□ -1.35
VDR-208ENST00000550325 FAT2Q9NYQ8 4349 aa6.63□□□□□ -1.35
VDR-208ENST00000550325 KMT2AQ03164 3969 aa6.62□□□□□ -1.35
VDR-208ENST00000550325 DNAH11Q96DT5 4516 aa6.59□□□□□ -1.35
VDR-208ENST00000550325 P0C880 135 aa6.59□□□□□ -1.35
VDR-208ENST00000550325 HYDINQ4G0P3 5121 aa6.58□□□□□ -1.36
VDR-208ENST00000550325 KRTAP10-1P60331 282 aa6.57□□□□□ -1.36
VDR-208ENST00000550325 COX6B2Q6YFQ2 88 aa6.56□□□□□ -1.36
VDR-208ENST00000550325 KRTAP1-4P0C5Y4 121 aa6.56□□□□□ -1.36
VDR-208ENST00000550325 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
VDR-208ENST00000550325 C10orf95Q9H7T3 257 aa6.51□□□□□ -1.37
VDR-208ENST00000550325 NDUFAF8A1L188 74 aa6.48□□□□□ -1.37
VDR-208ENST00000550325 RPL37P61927 97 aaKnown RBP6.47□□□□□ -1.37
VDR-208ENST00000550325 DNAH5Q8TE73 4624 aa6.45□□□□□ -1.38
VDR-208ENST00000550325 LRP1BQ9NZR2 4599 aa6.44□□□□□ -1.38
VDR-208ENST00000550325 TPRXLQ17RH7 258 aa6.43□□□□□ -1.38
VDR-208ENST00000550325 SACSQ9NZJ4 4579 aa6.41□□□□□ -1.38
VDR-208ENST00000550325 PKHD1P08F94 4074 aa6.4□□□□□ -1.38
VDR-208ENST00000550325 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
VDR-208ENST00000550325 C20orf166-AS1Q96NR2 134 aa6.36□□□□□ -1.39
VDR-208ENST00000550325 PKHD1L1Q86WI1 4243 aa6.35□□□□□ -1.39
VDR-208ENST00000550325 VPS13BQ7Z7G8 4022 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms