RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 LINC00304Q8N9R0 145 aa10.14□□□□□ -0.79
ATXN2-219ENST00000550104 CDC42SE1Q9NRR8 79 aa10.14□□□□□ -0.79
ATXN2-219ENST00000550104 SPANXA2-OT1Q8N9U9 137 aa10.12□□□□□ -0.79
ATXN2-219ENST00000550104 PRAC1Q96KF2 57 aa10.11□□□□□ -0.79
ATXN2-219ENST00000550104 TENM2Q9NT68 2774 aa10.1□□□□□ -0.79
ATXN2-219ENST00000550104 KRTAP10-1P60331 282 aa10.1□□□□□ -0.79
ATXN2-219ENST00000550104 LINC00483Q53H64 154 aa10.1□□□□□ -0.79
ATXN2-219ENST00000550104 Q5VV11 94 aa10.08□□□□□ -0.8
ATXN2-219ENST00000550104 Q8N9P0 234 aaPredicted RBP10.08□□□□□ -0.8
ATXN2-219ENST00000550104 C9orf92A6NGG3 77 aa10.05□□□□□ -0.8
ATXN2-219ENST00000550104 KRTAP29-1A8MX34 341 aaPredicted RBP10.05□□□□□ -0.8
ATXN2-219ENST00000550104 PRR26Q8N8Z3 221 aa10.05□□□□□ -0.8
ATXN2-219ENST00000550104 UQCR11O14957 56 aa10.03□□□□□ -0.8
ATXN2-219ENST00000550104 KRTAP13-1Q8IUC0 172 aa10.03□□□□□ -0.8
ATXN2-219ENST00000550104 AKAP9Q99996 3911 aa10.03□□□□□ -0.8
ATXN2-219ENST00000550104 MIR22HGQ0VDD5 57 aa10.02□□□□□ -0.81
ATXN2-219ENST00000550104 TGP01266 2768 aa10□□□□□ -0.81
ATXN2-219ENST00000550104 IGLV7-46A0A075B6I9 117 aa10□□□□□ -0.81
ATXN2-219ENST00000550104 Q75L30 129 aa9.97□□□□□ -0.81
ATXN2-219ENST00000550104 LINC01554Q52M75 96 aa9.97□□□□□ -0.81
ATXN2-219ENST00000550104 SPINT4Q6UDR6 99 aa9.96□□□□□ -0.82
ATXN2-219ENST00000550104 A0A087X002 238 aa9.95□□□□□ -0.82
ATXN2-219ENST00000550104 ZCCHC13Q8WW36 166 aaKnown RBP9.95□□□□□ -0.82
ATXN2-219ENST00000550104 NOTCH2NLQ7Z3S9 236 aa9.94□□□□□ -0.82
ATXN2-219ENST00000550104 A8MU10 97 aa9.91□□□□□ -0.82
ATXN2-219ENST00000550104 SPINK7P58062 85 aa9.91□□□□□ -0.82
ATXN2-219ENST00000550104 HRES1P13985 223 aa9.9□□□□□ -0.82
ATXN2-219ENST00000550104 Q8N1X5 172 aa9.87□□□□□ -0.83
ATXN2-219ENST00000550104 LCE6AA0A183 80 aa9.86□□□□□ -0.83
ATXN2-219ENST00000550104 Q5W150 140 aa9.85□□□□□ -0.83
ATXN2-219ENST00000550104 LINC01558Q9Y6Z2 57 aa9.82□□□□□ -0.84
ATXN2-219ENST00000550104 DMBT1Q9UGM3 2413 aaPredicted RBP9.78□□□□□ -0.84
ATXN2-219ENST00000550104 CSAG1Q6PB30 78 aa9.77□□□□□ -0.85
ATXN2-219ENST00000550104 KRTAP13-2Q52LG2 175 aa9.77□□□□□ -0.85
ATXN2-219ENST00000550104 KRTAP21-3Q3LHN1 58 aa9.74□□□□□ -0.85
ATXN2-219ENST00000550104 SRRM2Q9UQ35 2752 aaKnown RBP9.69□□□□□ -0.86
ATXN2-219ENST00000550104 FLG2Q5D862 2391 aaPredicted RBP9.68□□□□□ -0.86
ATXN2-219ENST00000550104 ASB16-AS1Q495Z4 193 aa9.67□□□□□ -0.86
ATXN2-219ENST00000550104 J3QL48 77 aa9.64□□□□□ -0.87
ATXN2-219ENST00000550104 A6NN06 94 aa9.63□□□□□ -0.87
ATXN2-219ENST00000550104 ADM2Q7Z4H4 148 aa9.61□□□□□ -0.87
ATXN2-219ENST00000550104 CRIPTQ9P021 101 aa9.61□□□□□ -0.87
ATXN2-219ENST00000550104 Q6ZSA8 131 aa9.61□□□□□ -0.87
ATXN2-219ENST00000550104 DMAC1Q96GE9 116 aa9.59□□□□□ -0.87
ATXN2-219ENST00000550104 HUWE1Q7Z6Z7 4374 aaKnown RBP9.57□□□□□ -0.88
ATXN2-219ENST00000550104 FBN3Q75N90 2809 aa9.56□□□□□ -0.88
ATXN2-219ENST00000550104 Q5VSD8 79 aa9.56□□□□□ -0.88
ATXN2-219ENST00000550104 MEGF8Q7Z7M0 2845 aa9.52□□□□□ -0.89
ATXN2-219ENST00000550104 KRTAP1-4P0C5Y4 121 aa9.52□□□□□ -0.89
ATXN2-219ENST00000550104 A0A0D9SG42 100 aa9.5□□□□□ -0.89
ATXN2-219ENST00000550104 CSMD3Q7Z407 3707 aa9.48□□□□□ -0.89
ATXN2-219ENST00000550104 RPS29P62273 56 aaKnown RBP9.41□□□□□ -0.9
ATXN2-219ENST00000550104 A0A1B0GU33 70 aa9.4□□□□□ -0.9
ATXN2-219ENST00000550104 COL7A1Q02388 2944 aa9.35□□□□□ -0.91
ATXN2-219ENST00000550104 DNAH9Q9NYC9 4486 aa9.28□□□□□ -0.92
ATXN2-219ENST00000550104 SPATA8Q6RVD6 105 aa9.27□□□□□ -0.93
ATXN2-219ENST00000550104 KRTAP16-1A8MUX0 517 aa9.25□□□□□ -0.93
ATXN2-219ENST00000550104 COX6B2Q6YFQ2 88 aa9.25□□□□□ -0.93
ATXN2-219ENST00000550104 S4R3F8 94 aa9.21□□□□□ -0.93
ATXN2-219ENST00000550104 A8MUU9 505 aa9.19□□□□□ -0.94
ATXN2-219ENST00000550104 C20orf166-AS1Q96NR2 134 aa9.18□□□□□ -0.94
ATXN2-219ENST00000550104 PLECQ15149 4684 aaKnown RBP9.16□□□□□ -0.94
ATXN2-219ENST00000550104 KRTAP13-3Q3SY46 172 aa9.16□□□□□ -0.94
ATXN2-219ENST00000550104 DNAH10Q8IVF4 4471 aa9.16□□□□□ -0.94
ATXN2-219ENST00000550104 KRTAP25-1Q3LHN0 102 aa9.12□□□□□ -0.95
ATXN2-219ENST00000550104 ANK2Q01484 3957 aa9.12□□□□□ -0.95
ATXN2-219ENST00000550104 H1FX-AS1Q4G0G2 97 aa9.11□□□□□ -0.95
ATXN2-219ENST00000550104 A0A1B0GVY2 172 aa9.1□□□□□ -0.95
ATXN2-219ENST00000550104 ROMO1P60602 79 aa9.07□□□□□ -0.96
ATXN2-219ENST00000550104 RPL37P61927 97 aaKnown RBP9.06□□□□□ -0.96
ATXN2-219ENST00000550104 LUZP6Q538Z0 58 aa9.06□□□□□ -0.96
ATXN2-219ENST00000550104 NDUFAF8A1L188 74 aa9.04□□□□□ -0.96
ATXN2-219ENST00000550104 DNAH1Q9P2D7 4330 aa9.01□□□□□ -0.97
ATXN2-219ENST00000550104 SEC61BP60468 96 aaKnown RBP8.99□□□□□ -0.97
ATXN2-219ENST00000550104 STARD9Q9P2P6 4700 aa8.95□□□□□ -0.98
ATXN2-219ENST00000550104 XP32Q5T750 250 aa8.94□□□□□ -0.98
ATXN2-219ENST00000550104 CMYA5Q8N3K9 4069 aa8.91□□□□□ -0.98
ATXN2-219ENST00000550104 PRKDCP78527 4128 aaKnown RBP8.91□□□□□ -0.98
ATXN2-219ENST00000550104 DNHD1Q96M86 4753 aa8.9□□□□□ -0.99
ATXN2-219ENST00000550104 DNAH3Q8TD57 4116 aa8.89□□□□□ -0.99
ATXN2-219ENST00000550104 VPS13DQ5THJ4 4388 aa8.89□□□□□ -0.99
ATXN2-219ENST00000550104 A0A0A0MQY5 61 aa8.87□□□□□ -0.99
ATXN2-219ENST00000550104 DNAH11Q96DT5 4516 aa8.86□□□□□ -0.99
ATXN2-219ENST00000550104 KRTAP10-8P60410 259 aa8.85□□□□□ -0.99
ATXN2-219ENST00000550104 R4GN34 69 aa8.85□□□□□ -0.99
ATXN2-219ENST00000550104 LYSTQ99698 3801 aa8.8□□□□□ -1
ATXN2-219ENST00000550104 M0QZ58 72 aa8.79□□□□□ -1
ATXN2-219ENST00000550104 DNAH17Q9UFH2 4485 aa8.75□□□□□ -1.01
ATXN2-219ENST00000550104 KMT2AQ03164 3969 aa8.74□□□□□ -1.01
ATXN2-219ENST00000550104 H0YAA0 97 aa8.74□□□□□ -1.01
ATXN2-219ENST00000550104 CAMK2N1Q7Z7J9 78 aa8.72□□□□□ -1.01
ATXN2-219ENST00000550104 DNAH5Q8TE73 4624 aa8.72□□□□□ -1.01
ATXN2-219ENST00000550104 M0R2T5 61 aa8.68□□□□□ -1.02
ATXN2-219ENST00000550104 KRTAP3-1Q9BYR8 98 aa8.67□□□□□ -1.02
ATXN2-219ENST00000550104 C10orf95Q9H7T3 257 aa8.66□□□□□ -1.02
ATXN2-219ENST00000550104 KRTAP10-4P60372 401 aaPredicted RBP8.66□□□□□ -1.02
ATXN2-219ENST00000550104 TPRXLQ17RH7 258 aa8.66□□□□□ -1.02
ATXN2-219ENST00000550104 ALMS1Q8TCU4 4167 aa8.65□□□□□ -1.03
ATXN2-219ENST00000550104 DNAH2Q9P225 4427 aa8.64□□□□□ -1.03
ATXN2-219ENST00000550104 DNAH8Q96JB1 4490 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms