RNA–Protein interactions for RNA: ENST00000549400.1

PTPRB-207, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 4

Gene PTPRB, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-207ENST00000549400 DNAH5Q8TE73 4624 aa2.46□□□□□ -2.01
PTPRB-207ENST00000549400 LYSTQ99698 3801 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 IGLV7-46A0A075B6I9 117 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 A8MWP4 228 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 SPART-AS1P0CW21 52 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 DEFB130BP0DP73 79 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 DEFB130AP0DP74 79 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 LINC00158P58513 81 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 KRTAP24-1Q3LI83 254 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 LUZP6Q538Z0 58 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 KRTAP26-1Q6PEX3 210 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.46□□□□□ -2.02
PTPRB-207ENST00000549400 LINC00575Q6W349 94 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 C15orf56Q8N910 161 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 DHRS4-AS1Q9P1J3 65 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 MGAM2Q2M2H8 2515 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 RYR3Q15413 4870 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 BIRC6Q9NR09 4857 aa2.46□□□□□ -2.02
PTPRB-207ENST00000549400 CSMD3Q7Z407 3707 aa2.45□□□□□ -2.02
PTPRB-207ENST00000549400 IGLV10-54A0A075B6I4 117 aa2.45□□□□□ -2.02
PTPRB-207ENST00000549400 CCL18P55774 89 aa2.45□□□□□ -2.02
PTPRB-207ENST00000549400 C1orf137Q5JT78 98 aa2.45□□□□□ -2.02
PTPRB-207ENST00000549400 C10orf25Q5T742 122 aa2.45□□□□□ -2.02
PTPRB-207ENST00000549400 LCE1AQ5T7P2 110 aa2.45□□□□□ -2.02
PTPRB-207ENST00000549400 SMIM29Q86T20 159 aa2.45□□□□□ -2.02
PTPRB-207ENST00000549400 IGLV8-61A0A075B6I0 122 aa2.44□□□□□ -2.02
PTPRB-207ENST00000549400 UQCR11O14957 56 aa2.44□□□□□ -2.02
PTPRB-207ENST00000549400 P0C880 135 aa2.44□□□□□ -2.02
PTPRB-207ENST00000549400 KRTAP25-1Q3LHN0 102 aa2.44□□□□□ -2.02
PTPRB-207ENST00000549400 SACSQ9NZJ4 4579 aa2.44□□□□□ -2.02
PTPRB-207ENST00000549400 COL7A1Q02388 2944 aa2.44□□□□□ -2.02
PTPRB-207ENST00000549400 FAT2Q9NYQ8 4349 aa2.43□□□□□ -2.02
PTPRB-207ENST00000549400 A0A1B0GVX0 72 aa2.43□□□□□ -2.02
PTPRB-207ENST00000549400 LINC01556Q5JQF7 62 aa2.43□□□□□ -2.02
PTPRB-207ENST00000549400 DMAC1Q96GE9 116 aa2.43□□□□□ -2.02
PTPRB-207ENST00000549400 KRTAP1-5Q9BYS1 174 aa2.43□□□□□ -2.02
PTPRB-207ENST00000549400 HYDINQ4G0P3 5121 aa2.43□□□□□ -2.02
PTPRB-207ENST00000549400 HECTD4Q9Y4D8 3996 aa2.42□□□□□ -2.02
PTPRB-207ENST00000549400 KIAA1109Q2LD37 5005 aa2.42□□□□□ -2.02
PTPRB-207ENST00000549400 IGLV1-50A0A075B6I6 118 aa2.42□□□□□ -2.02
PTPRB-207ENST00000549400 M0R2N4 97 aa2.42□□□□□ -2.02
PTPRB-207ENST00000549400 PRB2P02812 416 aaPredicted RBP2.42□□□□□ -2.02
PTPRB-207ENST00000549400 DNAH10OSP0CZ25 163 aa2.42□□□□□ -2.02
PTPRB-207ENST00000549400 LINC00483Q53H64 154 aa2.42□□□□□ -2.02
PTPRB-207ENST00000549400 C9orf163Q8N9P6 203 aa2.42□□□□□ -2.02
PTPRB-207ENST00000549400 ST20-AS1Q8NBB2 130 aa2.42□□□□□ -2.02
PTPRB-207ENST00000549400 C20orf166-AS1Q96NR2 134 aa2.42□□□□□ -2.02
PTPRB-207ENST00000549400 SPRR4Q96PI1 79 aa2.42□□□□□ -2.02
PTPRB-207ENST00000549400 ALMS1Q8TCU4 4167 aa2.42□□□□□ -2.02
PTPRB-207ENST00000549400 DEFB4AO15263 64 aa2.41□□□□□ -2.02
PTPRB-207ENST00000549400 IGLV6-57P01721 117 aa2.41□□□□□ -2.02
PTPRB-207ENST00000549400 ANGP03950 147 aaKnown RBP2.41□□□□□ -2.02
PTPRB-207ENST00000549400 TLX1NBP0CAT3 122 aa2.41□□□□□ -2.02
PTPRB-207ENST00000549400 CAMK2N1Q7Z7J9 78 aa2.41□□□□□ -2.02
PTPRB-207ENST00000549400 Q8N9L7 120 aa2.41□□□□□ -2.02
PTPRB-207ENST00000549400 CIRBP-AS1Q8TBR5 109 aa2.41□□□□□ -2.02
PTPRB-207ENST00000549400 TOMM7Q9P0U1 55 aa2.41□□□□□ -2.02
PTPRB-207ENST00000549400 WFDC10BQ8IUB3 73 aa2.4□□□□□ -2.03
PTPRB-207ENST00000549400 C6orf48Q9UBA6 75 aa2.4□□□□□ -2.03
PTPRB-207ENST00000549400 KMT2CQ8NEZ4 4911 aaKnown RBP2.4□□□□□ -2.03
PTPRB-207ENST00000549400 IGKV3OR2-268A0A0C4DH90 116 aa2.39□□□□□ -2.03
PTPRB-207ENST00000549400 NUPR2A6NF83 97 aa2.39□□□□□ -2.03
PTPRB-207ENST00000549400 ZNF861PO60384 105 aa2.39□□□□□ -2.03
PTPRB-207ENST00000549400 CLPSL2Q6UWE3 100 aa2.39□□□□□ -2.03
PTPRB-207ENST00000549400 Q6ZQY7 126 aa2.39□□□□□ -2.03
PTPRB-207ENST00000549400 KLK12Q9UKR0 248 aa2.39□□□□□ -2.03
PTPRB-207ENST00000549400 EPPK1P58107 5090 aaKnown RBP2.39□□□□□ -2.03
PTPRB-207ENST00000549400 LRP1BQ9NZR2 4599 aa2.39□□□□□ -2.03
PTPRB-207ENST00000549400 MEGF8Q7Z7M0 2845 aa2.39□□□□□ -2.03
PTPRB-207ENST00000549400 FRAS1Q86XX4 4008 aa2.39□□□□□ -2.03
PTPRB-207ENST00000549400 DEFB131BA0A096LNP1 70 aa2.38□□□□□ -2.03
PTPRB-207ENST00000549400 A8MUU9 505 aa2.38□□□□□ -2.03
PTPRB-207ENST00000549400 K7EIL1 84 aa2.38□□□□□ -2.03
PTPRB-207ENST00000549400 KMT2AQ03164 3969 aa2.38□□□□□ -2.03
PTPRB-207ENST00000549400 UNQ6190/PRO20217Q6UXQ8 127 aa2.38□□□□□ -2.03
PTPRB-207ENST00000549400 IGKV2D-24A0A075B6R9 120 aa2.37□□□□□ -2.03
PTPRB-207ENST00000549400 NDUFAF8A1L188 74 aa2.37□□□□□ -2.03
PTPRB-207ENST00000549400 SPRR1AP35321 89 aa2.37□□□□□ -2.03
PTPRB-207ENST00000549400 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
PTPRB-207ENST00000549400 DYNC1H1Q14204 4646 aaKnown RBP2.37□□□□□ -2.03
PTPRB-207ENST00000549400 TENM2Q9NT68 2774 aa2.36□□□□□ -2.03
PTPRB-207ENST00000549400 PANO1I0J062 215 aa2.36□□□□□ -2.03
PTPRB-207ENST00000549400 HTN3P15516 51 aa2.36□□□□□ -2.03
PTPRB-207ENST00000549400 PKD1P98161 4303 aa2.36□□□□□ -2.03
PTPRB-207ENST00000549400 A0A1B0GU69 56 aa2.35□□□□□ -2.03
PTPRB-207ENST00000549400 Q5W150 140 aa2.35□□□□□ -2.03
PTPRB-207ENST00000549400 Q8NBF4 154 aa2.35□□□□□ -2.03
PTPRB-207ENST00000549400 HRES1P13985 223 aa2.34□□□□□ -2.03
PTPRB-207ENST00000549400 DSCR10P59022 87 aa2.34□□□□□ -2.03
PTPRB-207ENST00000549400 SPINT4Q6UDR6 99 aa2.34□□□□□ -2.03
PTPRB-207ENST00000549400 KRTAP7-1Q8IUC3 87 aa2.34□□□□□ -2.03
PTPRB-207ENST00000549400 KRTAP2-2Q9BYT5 123 aa2.34□□□□□ -2.03
PTPRB-207ENST00000549400 IGLV5-48A0A075B6I7 105 aa2.33□□□□□ -2.04
PTPRB-207ENST00000549400 ACYP2P14621 99 aa2.33□□□□□ -2.04
PTPRB-207ENST00000549400 TP53AIP1Q9HCN2 124 aa2.33□□□□□ -2.04
PTPRB-207ENST00000549400 APLNQ9ULZ1 77 aa2.33□□□□□ -2.04
PTPRB-207ENST00000549400 APOBP04114 4563 aaKnown RBP2.33□□□□□ -2.04
PTPRB-207ENST00000549400 K7EQZ3 153 aa2.32□□□□□ -2.04
PTPRB-207ENST00000549400 LINC00472Q9H8W2 130 aa2.32□□□□□ -2.04
PTPRB-207ENST00000549400 MUC2Q02817 5179 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms