RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 KRTAP10-2P60368 255 aa8.49□□□□□ -1.05
CACNB3-209ENST00000548860 ZCCHC13Q8WW36 166 aaKnown RBP8.49□□□□□ -1.05
CACNB3-209ENST00000548860 WWC2-AS2Q96NR7 200 aa8.48□□□□□ -1.05
CACNB3-209ENST00000548860 MEGF8Q7Z7M0 2845 aa8.48□□□□□ -1.05
CACNB3-209ENST00000548860 Q96NJ1 140 aa8.46□□□□□ -1.05
CACNB3-209ENST00000548860 H3BPC8 53 aa8.46□□□□□ -1.06
CACNB3-209ENST00000548860 SPRR1BP22528 89 aa8.45□□□□□ -1.06
CACNB3-209ENST00000548860 Q6ZRN7 208 aaPredicted RBP8.44□□□□□ -1.06
CACNB3-209ENST00000548860 TYMSOSQ8TAI1 123 aa8.44□□□□□ -1.06
CACNB3-209ENST00000548860 CYP4F30PQ9H0H9 118 aa8.44□□□□□ -1.06
CACNB3-209ENST00000548860 C9orf92A6NGG3 77 aa8.43□□□□□ -1.06
CACNB3-209ENST00000548860 Q1T7F1 81 aa8.43□□□□□ -1.06
CACNB3-209ENST00000548860 C7orf65Q6ZTY9 151 aa8.43□□□□□ -1.06
CACNB3-209ENST00000548860 DNAH9Q9NYC9 4486 aa8.43□□□□□ -1.06
CACNB3-209ENST00000548860 Q5VV11 94 aa8.42□□□□□ -1.06
CACNB3-209ENST00000548860 DNAH7Q8WXX0 4024 aa8.41□□□□□ -1.06
CACNB3-209ENST00000548860 Q5W150 140 aa8.41□□□□□ -1.06
CACNB3-209ENST00000548860 Q8N1X5 172 aa8.4□□□□□ -1.06
CACNB3-209ENST00000548860 A0A1B0GU69 56 aa8.39□□□□□ -1.07
CACNB3-209ENST00000548860 LOC101927531A0A1B0GV80 90 aa8.39□□□□□ -1.07
CACNB3-209ENST00000548860 ACYP2P14621 99 aa8.39□□□□□ -1.07
CACNB3-209ENST00000548860 HRES1P13985 223 aa8.39□□□□□ -1.07
CACNB3-209ENST00000548860 IGLV7-46A0A075B6I9 117 aa8.38□□□□□ -1.07
CACNB3-209ENST00000548860 PRAC1Q96KF2 57 aa8.38□□□□□ -1.07
CACNB3-209ENST00000548860 SPANXA2-OT1Q8N9U9 137 aa8.37□□□□□ -1.07
CACNB3-209ENST00000548860 PLAC8Q9NZF1 115 aa8.36□□□□□ -1.07
CACNB3-209ENST00000548860 C8orf87E5RJ46 101 aa8.36□□□□□ -1.07
CACNB3-209ENST00000548860 SPINK7P58062 85 aa8.35□□□□□ -1.07
CACNB3-209ENST00000548860 PLECQ15149 4684 aaKnown RBP8.34□□□□□ -1.07
CACNB3-209ENST00000548860 KRTAP10-1P60331 282 aa8.34□□□□□ -1.07
CACNB3-209ENST00000548860 LCE6AA0A183 80 aa8.33□□□□□ -1.08
CACNB3-209ENST00000548860 SSBP3-AS1Q7Z2R9 100 aa8.32□□□□□ -1.08
CACNB3-209ENST00000548860 KRTAP13-1Q8IUC0 172 aa8.32□□□□□ -1.08
CACNB3-209ENST00000548860 DNAH3Q8TD57 4116 aa8.32□□□□□ -1.08
CACNB3-209ENST00000548860 ATP11AUNQ6ZP68 121 aa8.31□□□□□ -1.08
CACNB3-209ENST00000548860 FAM229AH3BQW9 127 aa8.31□□□□□ -1.08
CACNB3-209ENST00000548860 LCA10Q71F78 164 aa8.3□□□□□ -1.08
CACNB3-209ENST00000548860 Q6ZR54 194 aa8.26□□□□□ -1.09
CACNB3-209ENST00000548860 PRKDCP78527 4128 aaKnown RBP8.24□□□□□ -1.09
CACNB3-209ENST00000548860 LINC00483Q53H64 154 aa8.24□□□□□ -1.09
CACNB3-209ENST00000548860 DNAH1Q9P2D7 4330 aa8.23□□□□□ -1.09
CACNB3-209ENST00000548860 STARD9Q9P2P6 4700 aa8.22□□□□□ -1.09
CACNB3-209ENST00000548860 KMT2AQ03164 3969 aa8.21□□□□□ -1.1
CACNB3-209ENST00000548860 LINC00304Q8N9R0 145 aa8.2□□□□□ -1.1
CACNB3-209ENST00000548860 K7ERS5 55 aa8.19□□□□□ -1.1
CACNB3-209ENST00000548860 KRTAP13-2Q52LG2 175 aa8.18□□□□□ -1.1
CACNB3-209ENST00000548860 DNHD1Q96M86 4753 aa8.17□□□□□ -1.1
CACNB3-209ENST00000548860 Q75L30 129 aa8.17□□□□□ -1.1
CACNB3-209ENST00000548860 CDC42SE1Q9NRR8 79 aa8.17□□□□□ -1.1
CACNB3-209ENST00000548860 LINC01554Q52M75 96 aa8.15□□□□□ -1.1
CACNB3-209ENST00000548860 FRAS1Q86XX4 4008 aa8.15□□□□□ -1.1
CACNB3-209ENST00000548860 LINC01558Q9Y6Z2 57 aa8.15□□□□□ -1.1
CACNB3-209ENST00000548860 ADM2Q7Z4H4 148 aa8.15□□□□□ -1.11
CACNB3-209ENST00000548860 MIR22HGQ0VDD5 57 aa8.13□□□□□ -1.11
CACNB3-209ENST00000548860 A6NN06 94 aa8.1□□□□□ -1.11
CACNB3-209ENST00000548860 UQCR11O14957 56 aa8.1□□□□□ -1.11
CACNB3-209ENST00000548860 CRIPTQ9P021 101 aa8.04□□□□□ -1.12
CACNB3-209ENST00000548860 VPS13DQ5THJ4 4388 aa8.01□□□□□ -1.13
CACNB3-209ENST00000548860 DNAH2Q9P225 4427 aa8□□□□□ -1.13
CACNB3-209ENST00000548860 DMAC1Q96GE9 116 aa7.99□□□□□ -1.13
CACNB3-209ENST00000548860 DNAH11Q96DT5 4516 aa7.99□□□□□ -1.13
CACNB3-209ENST00000548860 DNAH6Q9C0G6 4158 aa7.98□□□□□ -1.13
CACNB3-209ENST00000548860 A0A0D9SG42 100 aa7.98□□□□□ -1.13
CACNB3-209ENST00000548860 DNAH8Q96JB1 4490 aa7.97□□□□□ -1.13
CACNB3-209ENST00000548860 DNAH17Q9UFH2 4485 aa7.96□□□□□ -1.14
CACNB3-209ENST00000548860 CSAG1Q6PB30 78 aa7.95□□□□□ -1.14
CACNB3-209ENST00000548860 HECTD4Q9Y4D8 3996 aa7.95□□□□□ -1.14
CACNB3-209ENST00000548860 ASB16-AS1Q495Z4 193 aa7.95□□□□□ -1.14
CACNB3-209ENST00000548860 KRTAP1-4P0C5Y4 121 aa7.91□□□□□ -1.14
CACNB3-209ENST00000548860 SPATA8Q6RVD6 105 aa7.88□□□□□ -1.15
CACNB3-209ENST00000548860 DYNC2H1Q8NCM8 4307 aaKnown RBP7.85□□□□□ -1.15
CACNB3-209ENST00000548860 HYDINQ4G0P3 5121 aa7.83□□□□□ -1.16
CACNB3-209ENST00000548860 LRP1BQ9NZR2 4599 aa7.83□□□□□ -1.16
CACNB3-209ENST00000548860 A0A1B0GU33 70 aa7.82□□□□□ -1.16
CACNB3-209ENST00000548860 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
CACNB3-209ENST00000548860 J3QL48 77 aa7.78□□□□□ -1.16
CACNB3-209ENST00000548860 Q6ZSA8 131 aa7.78□□□□□ -1.16
CACNB3-209ENST00000548860 KRTAP16-1A8MUX0 517 aa7.77□□□□□ -1.17
CACNB3-209ENST00000548860 DNAH5Q8TE73 4624 aa7.75□□□□□ -1.17
CACNB3-209ENST00000548860 SPINT4Q6UDR6 99 aa7.7□□□□□ -1.18
CACNB3-209ENST00000548860 PKHD1P08F94 4074 aa7.69□□□□□ -1.18
CACNB3-209ENST00000548860 COX6B2Q6YFQ2 88 aa7.68□□□□□ -1.18
CACNB3-209ENST00000548860 ALMS1Q8TCU4 4167 aa7.68□□□□□ -1.18
CACNB3-209ENST00000548860 Q5VSD8 79 aa7.68□□□□□ -1.18
CACNB3-209ENST00000548860 VPS13BQ7Z7G8 4022 aa7.68□□□□□ -1.18
CACNB3-209ENST00000548860 FAT1Q14517 4588 aa7.66□□□□□ -1.18
CACNB3-209ENST00000548860 FAT2Q9NYQ8 4349 aa7.64□□□□□ -1.19
CACNB3-209ENST00000548860 H1FX-AS1Q4G0G2 97 aa7.6□□□□□ -1.19
CACNB3-209ENST00000548860 A0A0A0MQY5 61 aa7.57□□□□□ -1.2
CACNB3-209ENST00000548860 H0YAA0 97 aa7.55□□□□□ -1.2
CACNB3-209ENST00000548860 ROMO1P60602 79 aa7.54□□□□□ -1.2
CACNB3-209ENST00000548860 S4R3F8 94 aa7.52□□□□□ -1.21
CACNB3-209ENST00000548860 PKD1P98161 4303 aa7.51□□□□□ -1.21
CACNB3-209ENST00000548860 A8MUU9 505 aa7.51□□□□□ -1.21
CACNB3-209ENST00000548860 MYCBP2O75592 4640 aa7.51□□□□□ -1.21
CACNB3-209ENST00000548860 C20orf166-AS1Q96NR2 134 aa7.49□□□□□ -1.21
CACNB3-209ENST00000548860 KRTAP3-1Q9BYR8 98 aa7.47□□□□□ -1.21
CACNB3-209ENST00000548860 DYNC1H1Q14204 4646 aaKnown RBP7.47□□□□□ -1.21
CACNB3-209ENST00000548860 SACSQ9NZJ4 4579 aa7.45□□□□□ -1.22
CACNB3-209ENST00000548860 NDUFAF8A1L188 74 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms