RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 IGKV2-24A0A0C4DH68 120 aa4.08□□□□□ -1.76
CASC18-202ENST00000548557 Q9BRP9 147 aa4.08□□□□□ -1.76
CASC18-202ENST00000548557 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
CASC18-202ENST00000548557 SPACA4Q8TDM5 124 aa4.07□□□□□ -1.76
CASC18-202ENST00000548557 NREPQ16612 68 aa4.07□□□□□ -1.76
CASC18-202ENST00000548557 Q6ZSA8 131 aa4.07□□□□□ -1.76
CASC18-202ENST00000548557 ETDCA0A1B0GVM5 59 aa4.06□□□□□ -1.76
CASC18-202ENST00000548557 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.06□□□□□ -1.76
CASC18-202ENST00000548557 IGKV4-1P06312 121 aa4.06□□□□□ -1.76
CASC18-202ENST00000548557 KRTAP10-1P60331 282 aa4.06□□□□□ -1.76
CASC18-202ENST00000548557 IGLV8-61A0A075B6I0 122 aa4.05□□□□□ -1.76
CASC18-202ENST00000548557 LOC100996750A0A140TA64 210 aa4.05□□□□□ -1.76
CASC18-202ENST00000548557 ERC2-IT1O76042 136 aa4.05□□□□□ -1.76
CASC18-202ENST00000548557 Q8N9L7 120 aa4.05□□□□□ -1.76
CASC18-202ENST00000548557 ST20-AS1Q8NBB2 130 aa4.05□□□□□ -1.76
CASC18-202ENST00000548557 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
CASC18-202ENST00000548557 PLAC8Q9NZF1 115 aa4.05□□□□□ -1.76
CASC18-202ENST00000548557 PKD1P98161 4303 aa4.05□□□□□ -1.76
CASC18-202ENST00000548557 A0A1W2PNM2 257 aa4.05□□□□□ -1.76
CASC18-202ENST00000548557 A0A1W2PNN7 141 aa4.05□□□□□ -1.76
CASC18-202ENST00000548557 PANO1I0J062 215 aa4.05□□□□□ -1.76
CASC18-202ENST00000548557 XP32Q5T750 250 aa4.05□□□□□ -1.76
CASC18-202ENST00000548557 DNAH11Q96DT5 4516 aa4.05□□□□□ -1.76
CASC18-202ENST00000548557 HECTD4Q9Y4D8 3996 aa4.05□□□□□ -1.76
CASC18-202ENST00000548557 BPY2O14599 106 aa4.04□□□□□ -1.76
CASC18-202ENST00000548557 C1orf137Q5JT78 98 aa4.04□□□□□ -1.76
CASC18-202ENST00000548557 Q8NBF4 154 aa4.03□□□□□ -1.76
CASC18-202ENST00000548557 CIRBP-AS1Q8TBR5 109 aa4.03□□□□□ -1.76
CASC18-202ENST00000548557 SPRR4Q96PI1 79 aa4.03□□□□□ -1.76
CASC18-202ENST00000548557 TMEM254Q8TBM7 123 aa4.02□□□□□ -1.77
CASC18-202ENST00000548557 MIR22HGQ0VDD5 57 aa4.02□□□□□ -1.77
CASC18-202ENST00000548557 SMIM29Q86T20 159 aa4.01□□□□□ -1.77
CASC18-202ENST00000548557 DNAH5Q8TE73 4624 aa4.01□□□□□ -1.77
CASC18-202ENST00000548557 PKHD1P08F94 4074 aa4.01□□□□□ -1.77
CASC18-202ENST00000548557 PRR15LQ9BU68 103 aa4.01□□□□□ -1.77
CASC18-202ENST00000548557 DSCR10P59022 87 aa3.99□□□□□ -1.77
CASC18-202ENST00000548557 LOC101927531A0A1B0GV80 90 aa3.98□□□□□ -1.77
CASC18-202ENST00000548557 PRLHP81277 87 aa3.98□□□□□ -1.77
CASC18-202ENST00000548557 CSAG1Q6PB30 78 aa3.98□□□□□ -1.77
CASC18-202ENST00000548557 IGFL1Q6UW32 110 aa3.98□□□□□ -1.77
CASC18-202ENST00000548557 P0C880 135 aa3.97□□□□□ -1.77
CASC18-202ENST00000548557 CAMK2N1Q7Z7J9 78 aa3.97□□□□□ -1.77
CASC18-202ENST00000548557 LRP1BQ9NZR2 4599 aa3.97□□□□□ -1.77
CASC18-202ENST00000548557 A0A1B0GVX0 72 aa3.97□□□□□ -1.77
CASC18-202ENST00000548557 K7EQZ3 153 aa3.97□□□□□ -1.77
CASC18-202ENST00000548557 KRTAP11-1Q8IUC1 163 aa3.97□□□□□ -1.77
CASC18-202ENST00000548557 DYNC1H1Q14204 4646 aaKnown RBP3.97□□□□□ -1.77
CASC18-202ENST00000548557 A0A0G2JQZ4 141 aa3.96□□□□□ -1.77
CASC18-202ENST00000548557 HIGD2AQ9BW72 106 aa3.96□□□□□ -1.77
CASC18-202ENST00000548557 PSORS1C2Q9UIG4 136 aa3.96□□□□□ -1.77
CASC18-202ENST00000548557 Q8N9P0 234 aaPredicted RBP3.96□□□□□ -1.78
CASC18-202ENST00000548557 C20orf166-AS1Q96NR2 134 aa3.95□□□□□ -1.78
CASC18-202ENST00000548557 DNAH8Q96JB1 4490 aa3.95□□□□□ -1.78
CASC18-202ENST00000548557 SPRR1BP22528 89 aa3.94□□□□□ -1.78
CASC18-202ENST00000548557 EPPK1P58107 5090 aaKnown RBP3.94□□□□□ -1.78
CASC18-202ENST00000548557 A0A087WSZ3 146 aa3.94□□□□□ -1.78
CASC18-202ENST00000548557 A8MUU9 505 aa3.93□□□□□ -1.78
CASC18-202ENST00000548557 ZNF861PO60384 105 aa3.93□□□□□ -1.78
CASC18-202ENST00000548557 SMR3BP02814 79 aaPredicted RBP3.93□□□□□ -1.78
CASC18-202ENST00000548557 IGLV7-43P04211 117 aa3.93□□□□□ -1.78
CASC18-202ENST00000548557 RPL37AP61513 92 aaKnown RBP3.93□□□□□ -1.78
CASC18-202ENST00000548557 KRTAP13-1Q8IUC0 172 aa3.93□□□□□ -1.78
CASC18-202ENST00000548557 DEFB116Q30KQ4 102 aa3.92□□□□□ -1.78
CASC18-202ENST00000548557 ZCCHC13Q8WW36 166 aaKnown RBP3.92□□□□□ -1.78
CASC18-202ENST00000548557 APOBP04114 4563 aaKnown RBP3.92□□□□□ -1.78
CASC18-202ENST00000548557 SRRM2Q9UQ35 2752 aaKnown RBP3.9□□□□□ -1.79
CASC18-202ENST00000548557 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
CASC18-202ENST00000548557 KRTAP29-1A8MX34 341 aaPredicted RBP3.9□□□□□ -1.79
CASC18-202ENST00000548557 WFDC13Q8IUB5 93 aa3.9□□□□□ -1.79
CASC18-202ENST00000548557 Q8N1X5 172 aa3.9□□□□□ -1.79
CASC18-202ENST00000548557 H3BPC8 53 aa3.89□□□□□ -1.79
CASC18-202ENST00000548557 KRTAP10-4P60372 401 aaPredicted RBP3.89□□□□□ -1.79
CASC18-202ENST00000548557 LINC00483Q53H64 154 aa3.89□□□□□ -1.79
CASC18-202ENST00000548557 SPINK6Q6UWN8 80 aa3.89□□□□□ -1.79
CASC18-202ENST00000548557 LINC00472Q9H8W2 130 aa3.89□□□□□ -1.79
CASC18-202ENST00000548557 RYR1P21817 5038 aa3.89□□□□□ -1.79
CASC18-202ENST00000548557 Q5VSD8 79 aa3.89□□□□□ -1.79
CASC18-202ENST00000548557 SPAG11AQ6PDA7 123 aa3.89□□□□□ -1.79
CASC18-202ENST00000548557 KIAA1109Q2LD37 5005 aa3.89□□□□□ -1.79
CASC18-202ENST00000548557 VPS13BQ7Z7G8 4022 aa3.87□□□□□ -1.79
CASC18-202ENST00000548557 KRTAP19-4Q3LI73 84 aa3.87□□□□□ -1.79
CASC18-202ENST00000548557 HSPG2P98160 4391 aa3.86□□□□□ -1.79
CASC18-202ENST00000548557 BIRC6Q9NR09 4857 aa3.86□□□□□ -1.79
CASC18-202ENST00000548557 FAT1Q14517 4588 aa3.85□□□□□ -1.79
CASC18-202ENST00000548557 NDUFB1O75438 58 aa3.85□□□□□ -1.79
CASC18-202ENST00000548557 MMP24-AS1A0A0U1RRL7 71 aa3.84□□□□□ -1.8
CASC18-202ENST00000548557 LINC00208Q96KT6 92 aa3.84□□□□□ -1.8
CASC18-202ENST00000548557 Q96NJ1 140 aa3.84□□□□□ -1.8
CASC18-202ENST00000548557 H0Y9P7 68 aa3.83□□□□□ -1.8
CASC18-202ENST00000548557 KRTAP17-1Q9BYP8 105 aa3.83□□□□□ -1.8
CASC18-202ENST00000548557 KRTAP1-4P0C5Y4 121 aa3.83□□□□□ -1.8
CASC18-202ENST00000548557 KRTAP4-8Q9BYQ9 185 aa3.82□□□□□ -1.8
CASC18-202ENST00000548557 SPINK7P58062 85 aa3.81□□□□□ -1.8
CASC18-202ENST00000548557 SPANXA2-OT1Q8N9U9 137 aa3.81□□□□□ -1.8
CASC18-202ENST00000548557 LINC01558Q9Y6Z2 57 aa3.81□□□□□ -1.8
CASC18-202ENST00000548557 KRTAP25-1Q3LHN0 102 aa3.8□□□□□ -1.8
CASC18-202ENST00000548557 ANAPC11Q9NYG5 84 aa3.8□□□□□ -1.8
CASC18-202ENST00000548557 SSBP3-AS1Q7Z2R9 100 aa3.79□□□□□ -1.8
CASC18-202ENST00000548557 HERC2O95714 4834 aa3.78□□□□□ -1.8
CASC18-202ENST00000548557 KRTAP4-5Q9BYR2 181 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms