RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 COX17Q14061 63 aa1.41□□□□□ -2.18
SCAF11-210ENST00000547654 PRR15LQ9BU68 103 aa1.41□□□□□ -2.18
SCAF11-210ENST00000547654 CACFD1Q9UGQ2 172 aa1.41□□□□□ -2.18
SCAF11-210ENST00000547654 A0A0G2JND7 137 aa1.4□□□□□ -2.19
SCAF11-210ENST00000547654 DEFB104AQ8WTQ1 72 aa1.4□□□□□ -2.19
SCAF11-210ENST00000547654 APLNQ9ULZ1 77 aa1.4□□□□□ -2.19
SCAF11-210ENST00000547654 TRBV7-7A0A0K0K1E9 115 aa1.39□□□□□ -2.19
SCAF11-210ENST00000547654 H3BUX3 64 aa1.39□□□□□ -2.19
SCAF11-210ENST00000547654 HAMPP81172 84 aa1.39□□□□□ -2.19
SCAF11-210ENST00000547654 PMCHL1Q16048 86 aa1.39□□□□□ -2.19
SCAF11-210ENST00000547654 C9orf62Q8N4C0 152 aa1.39□□□□□ -2.19
SCAF11-210ENST00000547654 MGPP08493 103 aa1.38□□□□□ -2.19
SCAF11-210ENST00000547654 SAA2P0DJI9 122 aaPredicted RBP1.38□□□□□ -2.19
SCAF11-210ENST00000547654 PYY3Q5JQD4 70 aa1.38□□□□□ -2.19
SCAF11-210ENST00000547654 FAM223AQ8IWN6 122 aa1.38□□□□□ -2.19
SCAF11-210ENST00000547654 MDN1Q9NU22 5596 aa1.37□□□□□ -2.19
SCAF11-210ENST00000547654 A0A1B0GWA3 101 aa1.37□□□□□ -2.19
SCAF11-210ENST00000547654 SYS1-DBNDD2H3BUS1 97 aa1.37□□□□□ -2.19
SCAF11-210ENST00000547654 DEFB136Q30KP8 78 aa1.37□□□□□ -2.19
SCAF11-210ENST00000547654 AHNAK2Q8IVF2 5795 aa1.37□□□□□ -2.19
SCAF11-210ENST00000547654 M0R3E3 92 aa1.36□□□□□ -2.19
SCAF11-210ENST00000547654 CCL22O00626 93 aa1.36□□□□□ -2.19
SCAF11-210ENST00000547654 PRO1933Q9H354 126 aa1.36□□□□□ -2.19
SCAF11-210ENST00000547654 TRBV25-1A0A075B6N4 114 aa1.35□□□□□ -2.19
SCAF11-210ENST00000547654 ZNF815PA8K554 130 aa1.35□□□□□ -2.19
SCAF11-210ENST00000547654 H7BZZ5 65 aa1.35□□□□□ -2.19
SCAF11-210ENST00000547654 PRB3Q04118 309 aaPredicted RBP1.35□□□□□ -2.19
SCAF11-210ENST00000547654 NCBP2-AS2Q69YL0 99 aa1.35□□□□□ -2.19
SCAF11-210ENST00000547654 FAM223BA6NKX1 122 aa1.34□□□□□ -2.19
SCAF11-210ENST00000547654 H3BSH0 61 aa1.34□□□□□ -2.19
SCAF11-210ENST00000547654 SMIM11AP58511 58 aa1.33□□□□□ -2.2
SCAF11-210ENST00000547654 PSMG4Q5JS54 123 aa1.33□□□□□ -2.2
SCAF11-210ENST00000547654 C20orf78Q9BR46 151 aa1.33□□□□□ -2.2
SCAF11-210ENST00000547654 C7orf77A4D0Y5 90 aa1.32□□□□□ -2.2
SCAF11-210ENST00000547654 G3V318 75 aa1.32□□□□□ -2.2
SCAF11-210ENST00000547654 K7EP34 96 aa1.32□□□□□ -2.2
SCAF11-210ENST00000547654 CYB5AP00167 134 aa1.32□□□□□ -2.2
SCAF11-210ENST00000547654 S100A3P33764 101 aa1.32□□□□□ -2.2
SCAF11-210ENST00000547654 UBE2DNLQ8IWF7 75 aa1.32□□□□□ -2.2
SCAF11-210ENST00000547654 KRTAP2-3P0C7H8 128 aa1.31□□□□□ -2.2
SCAF11-210ENST00000547654 S100A16Q96FQ6 103 aaKnown RBP1.31□□□□□ -2.2
SCAF11-210ENST00000547654 KRTAP2-4Q9BYR9 128 aa1.31□□□□□ -2.2
SCAF11-210ENST00000547654 FLGP20930 4061 aaPredicted RBP1.31□□□□□ -2.2
SCAF11-210ENST00000547654 BCE1O60756 84 aa1.3□□□□□ -2.2
SCAF11-210ENST00000547654 MRPL33O75394 65 aaKnown RBP1.3□□□□□ -2.2
SCAF11-210ENST00000547654 NMBP08949 121 aa1.3□□□□□ -2.2
SCAF11-210ENST00000547654 Q6JHZ5 121 aa1.3□□□□□ -2.2
SCAF11-210ENST00000547654 TMEM263Q8WUH6 116 aaKnown RBP1.3□□□□□ -2.2
SCAF11-210ENST00000547654 SPRR4Q96PI1 79 aa1.3□□□□□ -2.2
SCAF11-210ENST00000547654 LINC00472Q9H8W2 130 aa1.3□□□□□ -2.2
SCAF11-210ENST00000547654 PEA15Q15121 130 aa1.29□□□□□ -2.2
SCAF11-210ENST00000547654 RABAC1Q9UI14 185 aa1.29□□□□□ -2.2
SCAF11-210ENST00000547654 A0A0D9SG42 100 aa1.28□□□□□ -2.2
SCAF11-210ENST00000547654 HMGN3Q15651 99 aa1.28□□□□□ -2.2
SCAF11-210ENST00000547654 DEFB135Q30KP9 77 aa1.28□□□□□ -2.2
SCAF11-210ENST00000547654 ETDBQ3ZM63 59 aa1.28□□□□□ -2.2
SCAF11-210ENST00000547654 LINC00846Q9NV44 126 aa1.28□□□□□ -2.2
SCAF11-210ENST00000547654 HIGD1BQ9P298 99 aa1.28□□□□□ -2.2
SCAF11-210ENST00000547654 ARMS2P0C7Q2 107 aa1.26□□□□□ -2.21
SCAF11-210ENST00000547654 MT1HP80294 61 aa1.26□□□□□ -2.21
SCAF11-210ENST00000547654 SSBP3-AS1Q7Z2R9 100 aa1.26□□□□□ -2.21
SCAF11-210ENST00000547654 C10orf95Q9H7T3 257 aa1.26□□□□□ -2.21
SCAF11-210ENST00000547654 M0R1W7 72 aa1.25□□□□□ -2.21
SCAF11-210ENST00000547654 C10orf113Q5VZT2 155 aa1.25□□□□□ -2.21
SCAF11-210ENST00000547654 ALKAL2Q6UX46 152 aa1.25□□□□□ -2.21
SCAF11-210ENST00000547654 KRTAP2-1Q9BYU5 128 aa1.25□□□□□ -2.21
SCAF11-210ENST00000547654 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
SCAF11-210ENST00000547654 A0A087WVE0 104 aa1.24□□□□□ -2.21
SCAF11-210ENST00000547654 F8WEM9 126 aa1.24□□□□□ -2.21
SCAF11-210ENST00000547654 H3BQF6 201 aa1.24□□□□□ -2.21
SCAF11-210ENST00000547654 DEFB4AO15263 64 aa1.24□□□□□ -2.21
SCAF11-210ENST00000547654 LEPROTL1O95214 131 aa1.24□□□□□ -2.21
SCAF11-210ENST00000547654 KRTAP19-2Q3LHN2 52 aa1.24□□□□□ -2.21
SCAF11-210ENST00000547654 S100A13Q99584 98 aa1.24□□□□□ -2.21
SCAF11-210ENST00000547654 KAAG1Q9UBP8 84 aa1.24□□□□□ -2.21
SCAF11-210ENST00000547654 D6R8Y8 96 aa1.23□□□□□ -2.21
SCAF11-210ENST00000547654 MUSTN1Q8IVN3 82 aa1.23□□□□□ -2.21
SCAF11-210ENST00000547654 LINC01600Q96MT4 127 aa1.23□□□□□ -2.21
SCAF11-210ENST00000547654 PSENENQ9NZ42 101 aa1.23□□□□□ -2.21
SCAF11-210ENST00000547654 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
SCAF11-210ENST00000547654 DEFB131BA0A096LNP1 70 aa1.22□□□□□ -2.21
SCAF11-210ENST00000547654 TRBV6-1A0A0K0K1D8 114 aa1.22□□□□□ -2.21
SCAF11-210ENST00000547654 KRTAP19-6Q3LI70 58 aa1.22□□□□□ -2.21
SCAF11-210ENST00000547654 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
SCAF11-210ENST00000547654 SPINK7P58062 85 aa1.21□□□□□ -2.22
SCAF11-210ENST00000547654 COX6A2Q02221 97 aa1.21□□□□□ -2.22
SCAF11-210ENST00000547654 TDRG1Q3Y452 100 aa1.21□□□□□ -2.22
SCAF11-210ENST00000547654 FAM103A1Q9BTL3 118 aaKnown RBP1.21□□□□□ -2.22
SCAF11-210ENST00000547654 HILPDAQ9Y5L2 63 aa1.21□□□□□ -2.22
SCAF11-210ENST00000547654 KANTRA0A1W2PQU2 76 aa1.2□□□□□ -2.22
SCAF11-210ENST00000547654 HMGN2P05204 90 aaKnown RBP1.2□□□□□ -2.22
SCAF11-210ENST00000547654 GNGT1P63211 74 aa1.2□□□□□ -2.22
SCAF11-210ENST00000547654 ADIRFQ15847 76 aa1.2□□□□□ -2.22
SCAF11-210ENST00000547654 DEFB107AQ8IZN7 70 aa1.2□□□□□ -2.22
SCAF11-210ENST00000547654 MINOS1Q5TGZ0 78 aa1.19□□□□□ -2.22
SCAF11-210ENST00000547654 SPATA8Q6RVD6 105 aa1.19□□□□□ -2.22
SCAF11-210ENST00000547654 GAFA1Q96PS6 74 aa1.19□□□□□ -2.22
SCAF11-210ENST00000547654 SPCS1Q9Y6A9 102 aa1.19□□□□□ -2.22
SCAF11-210ENST00000547654 DSTQ03001 7570 aaKnown RBP1.19□□□□□ -2.22
SCAF11-210ENST00000547654 H0Y9P7 68 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms