RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	WWC2-AS2	Q96NR7	200 aa		6.02	□□□□□ -1.45
UBC-213	ENST00000546120	CSAG1	Q6PB30	78 aa		6.01	□□□□□ -1.45
UBC-213	ENST00000546120	TRRAP	Q9Y4A5	3859 aa		6	□□□□□ -1.45
UBC-213	ENST00000546120	ZNF861P	O60384	105 aa		6	□□□□□ -1.45
UBC-213	ENST00000546120		Q5W150	140 aa		6	□□□□□ -1.45
UBC-213	ENST00000546120	NOTCH2NL	Q7Z3S9	236 aa		6	□□□□□ -1.45
UBC-213	ENST00000546120	CHTF8	P0CG12	524 aa		5.99	□□□□□ -1.45
UBC-213	ENST00000546120	LY6G6C	O95867	125 aa		5.98	□□□□□ -1.45
UBC-213	ENST00000546120	MGAM2	Q2M2H8	2515 aa		5.97	□□□□□ -1.45
UBC-213	ENST00000546120	ADM2	Q7Z4H4	148 aa		5.97	□□□□□ -1.45
UBC-213	ENST00000546120	IGKV2D-30	A0A075B6S6	120 aa		5.96	□□□□□ -1.46
UBC-213	ENST00000546120	KRTAP10-11	P60412	298 aa		5.96	□□□□□ -1.46
UBC-213	ENST00000546120		K7ERS5	55 aa		5.95	□□□□□ -1.46
UBC-213	ENST00000546120	KRTAP25-1	Q3LHN0	102 aa		5.95	□□□□□ -1.46
UBC-213	ENST00000546120	KRTAP11-1	Q8IUC1	163 aa		5.95	□□□□□ -1.46
UBC-213	ENST00000546120	SPACA4	Q8TDM5	124 aa		5.95	□□□□□ -1.46
UBC-213	ENST00000546120	NBEAL2	Q6ZNJ1	2754 aa		5.95	□□□□□ -1.46
UBC-213	ENST00000546120	VWF	P04275	2813 aa		5.94	□□□□□ -1.46
UBC-213	ENST00000546120	IGLV5-52	A0A0A0MRZ9	124 aa		5.93	□□□□□ -1.46
UBC-213	ENST00000546120	ROMO1	P60602	79 aa		5.92	□□□□□ -1.46
UBC-213	ENST00000546120	C1orf134	Q5TEV5	83 aa		5.92	□□□□□ -1.46
UBC-213	ENST00000546120	UBE2DNL	Q8IWF7	75 aa		5.92	□□□□□ -1.46
UBC-213	ENST00000546120	ANAPC11	Q9NYG5	84 aa		5.91	□□□□□ -1.46
UBC-213	ENST00000546120	MEGF8	Q7Z7M0	2845 aa		5.9	□□□□□ -1.47
UBC-213	ENST00000546120	NOTCH1	P46531	2555 aa		5.9	□□□□□ -1.47
UBC-213	ENST00000546120	ALMS1	Q8TCU4	4167 aa		5.9	□□□□□ -1.47
UBC-213	ENST00000546120		A8MUU9	505 aa		5.89	□□□□□ -1.47
UBC-213	ENST00000546120		K7EIL1	84 aa		5.88	□□□□□ -1.47
UBC-213	ENST00000546120	TG	P01266	2768 aa		5.86	□□□□□ -1.47
UBC-213	ENST00000546120	SPINK6	Q6UWN8	80 aa		5.85	□□□□□ -1.47
UBC-213	ENST00000546120	PRKDC	P78527	4128 aa	Known RBP	5.84	□□□□□ -1.47
UBC-213	ENST00000546120	NBDY	A0A0U1RRE5	68 aa		5.84	□□□□□ -1.47
UBC-213	ENST00000546120	PSORS1C2	Q9UIG4	136 aa		5.84	□□□□□ -1.47
UBC-213	ENST00000546120	KRTAP1-5	Q9BYS1	174 aa		5.83	□□□□□ -1.48
UBC-213	ENST00000546120	APLN	Q9ULZ1	77 aa		5.83	□□□□□ -1.48
UBC-213	ENST00000546120	DNAH3	Q8TD57	4116 aa		5.83	□□□□□ -1.48
UBC-213	ENST00000546120	PANO1	I0J062	215 aa		5.81	□□□□□ -1.48
UBC-213	ENST00000546120		A0A1B0GU33	70 aa		5.8	□□□□□ -1.48
UBC-213	ENST00000546120	TENM2	Q9NT68	2774 aa		5.8	□□□□□ -1.48
UBC-213	ENST00000546120	KRTAP16-1	A8MUX0	517 aa		5.79	□□□□□ -1.48
UBC-213	ENST00000546120		Q6ZRN7	208 aa	Predicted RBP	5.79	□□□□□ -1.48
UBC-213	ENST00000546120	CIRBP-AS1	Q8TBR5	109 aa		5.79	□□□□□ -1.48
UBC-213	ENST00000546120	DNAH1	Q9P2D7	4330 aa		5.78	□□□□□ -1.48
UBC-213	ENST00000546120	LINC00304	Q8N9R0	145 aa		5.78	□□□□□ -1.48
UBC-213	ENST00000546120	NUPR2	A6NF83	97 aa		5.77	□□□□□ -1.49
UBC-213	ENST00000546120	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.77	□□□□□ -1.49
UBC-213	ENST00000546120	COX6B2	Q6YFQ2	88 aa		5.76	□□□□□ -1.49
UBC-213	ENST00000546120		Q6ZSA8	131 aa		5.76	□□□□□ -1.49
UBC-213	ENST00000546120		A0A087WTM6	91 aa		5.74	□□□□□ -1.49
UBC-213	ENST00000546120	RPS29	P62273	56 aa	Known RBP	5.74	□□□□□ -1.49
UBC-213	ENST00000546120	H1FX-AS1	Q4G0G2	97 aa		5.74	□□□□□ -1.49
UBC-213	ENST00000546120	DNAH9	Q9NYC9	4486 aa		5.74	□□□□□ -1.49
UBC-213	ENST00000546120		H0YAA0	97 aa		5.72	□□□□□ -1.49
UBC-213	ENST00000546120	COL7A1	Q02388	2944 aa		5.71	□□□□□ -1.5
UBC-213	ENST00000546120	SPINK1	P00995	79 aa		5.69	□□□□□ -1.5
UBC-213	ENST00000546120	HUWE1	Q7Z6Z7	4374 aa	Known RBP	5.64	□□□□□ -1.51
UBC-213	ENST00000546120	RPL37	P61927	97 aa	Known RBP	5.6	□□□□□ -1.51
UBC-213	ENST00000546120	DNAH7	Q8WXX0	4024 aa		5.58	□□□□□ -1.52
UBC-213	ENST00000546120	TENM3	Q9P273	2699 aa		5.58	□□□□□ -1.52
UBC-213	ENST00000546120	KRTAP13-2	Q52LG2	175 aa		5.56	□□□□□ -1.52
UBC-213	ENST00000546120	SPINT4	Q6UDR6	99 aa		5.56	□□□□□ -1.52
UBC-213	ENST00000546120	C20orf166-AS1	Q96NR2	134 aa		5.56	□□□□□ -1.52
UBC-213	ENST00000546120	STAB2	Q8WWQ8	2551 aa		5.55	□□□□□ -1.52
UBC-213	ENST00000546120		P0C880	135 aa		5.55	□□□□□ -1.52
UBC-213	ENST00000546120		Q8N1X5	172 aa		5.55	□□□□□ -1.52
UBC-213	ENST00000546120	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.55	□□□□□ -1.52
UBC-213	ENST00000546120	SRRM2	Q9UQ35	2752 aa	Known RBP	5.54	□□□□□ -1.52
UBC-213	ENST00000546120	TYMSOS	Q8TAI1	123 aa		5.53	□□□□□ -1.52
UBC-213	ENST00000546120	CRIPT	Q9P021	101 aa		5.52	□□□□□ -1.53
UBC-213	ENST00000546120	DYNC2H1	Q8NCM8	4307 aa	Known RBP	5.52	□□□□□ -1.53
UBC-213	ENST00000546120	RYR3	Q15413	4870 aa		5.51	□□□□□ -1.53
UBC-213	ENST00000546120	STARD9	Q9P2P6	4700 aa		5.48	□□□□□ -1.53
UBC-213	ENST00000546120	SACS	Q9NZJ4	4579 aa		5.48	□□□□□ -1.53
UBC-213	ENST00000546120	CSMD3	Q7Z407	3707 aa		5.48	□□□□□ -1.53
UBC-213	ENST00000546120	KRTAP1-4	P0C5Y4	121 aa		5.46	□□□□□ -1.54
UBC-213	ENST00000546120	KRTAP15-1	Q3LI76	137 aa		5.46	□□□□□ -1.54
UBC-213	ENST00000546120	LYST	Q99698	3801 aa		5.46	□□□□□ -1.54
UBC-213	ENST00000546120	RYR2	Q92736	4967 aa		5.45	□□□□□ -1.54
UBC-213	ENST00000546120	PLEC	Q15149	4684 aa	Known RBP	5.45	□□□□□ -1.54
UBC-213	ENST00000546120	KRTAP3-1	Q9BYR8	98 aa		5.43	□□□□□ -1.54
UBC-213	ENST00000546120	HYDIN	Q4G0P3	5121 aa		5.43	□□□□□ -1.54
UBC-213	ENST00000546120	NDUFAF8	A1L188	74 aa		5.38	□□□□□ -1.55
UBC-213	ENST00000546120	TPRXL	Q17RH7	258 aa		5.37	□□□□□ -1.55
UBC-213	ENST00000546120	VPS13D	Q5THJ4	4388 aa		5.37	□□□□□ -1.55
UBC-213	ENST00000546120	DNAH10	Q8IVF4	4471 aa		5.36	□□□□□ -1.55
UBC-213	ENST00000546120	DNAH8	Q96JB1	4490 aa		5.36	□□□□□ -1.55
UBC-213	ENST00000546120	EPPK1	P58107	5090 aa	Known RBP	5.33	□□□□□ -1.56
UBC-213	ENST00000546120	KRTAP10-6	P60371	365 aa	Predicted RBP	5.32	□□□□□ -1.56
UBC-213	ENST00000546120	KMT2A	Q03164	3969 aa		5.32	□□□□□ -1.56
UBC-213	ENST00000546120	DNAH6	Q9C0G6	4158 aa		5.32	□□□□□ -1.56
UBC-213	ENST00000546120		M0QZ58	72 aa		5.3	□□□□□ -1.56
UBC-213	ENST00000546120	LCE2B	O14633	110 aa		5.3	□□□□□ -1.56
UBC-213	ENST00000546120		S4R3F8	94 aa		5.29	□□□□□ -1.56
UBC-213	ENST00000546120	BIRC6	Q9NR09	4857 aa		5.29	□□□□□ -1.56
UBC-213	ENST00000546120	DNAH17	Q9UFH2	4485 aa		5.28	□□□□□ -1.56
UBC-213	ENST00000546120	XP32	Q5T750	250 aa		5.27	□□□□□ -1.57
UBC-213	ENST00000546120	FRAS1	Q86XX4	4008 aa		5.26	□□□□□ -1.57
UBC-213	ENST00000546120	HECTD4	Q9Y4D8	3996 aa		5.26	□□□□□ -1.57
UBC-213	ENST00000546120		A0A0A0MQY5	61 aa		5.25	□□□□□ -1.57
UBC-213	ENST00000546120	KRTAP10-1	P60331	282 aa		5.22	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms