RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 KRTAP10-10P60014 251 aa7.91□□□□□ -1.14
CLSTN3-216ENST00000545663 C21orf62-AS1Q17RA5 79 aa7.91□□□□□ -1.14
CLSTN3-216ENST00000545663 GTF2H5Q6ZYL4 71 aa7.91□□□□□ -1.14
CLSTN3-216ENST00000545663 RBM3P98179 157 aaKnown RBP7.9□□□□□ -1.14
CLSTN3-216ENST00000545663 Q5XG85 94 aa7.89□□□□□ -1.15
CLSTN3-216ENST00000545663 IGFL1Q6UW32 110 aa7.89□□□□□ -1.15
CLSTN3-216ENST00000545663 DSCR8Q96T75 97 aa7.89□□□□□ -1.15
CLSTN3-216ENST00000545663 PDE6GP18545 87 aa7.88□□□□□ -1.15
CLSTN3-216ENST00000545663 TEN1Q86WV5 123 aa7.88□□□□□ -1.15
CLSTN3-216ENST00000545663 K7EP34 96 aa7.87□□□□□ -1.15
CLSTN3-216ENST00000545663 SS18L2Q9UHA2 77 aa7.86□□□□□ -1.15
CLSTN3-216ENST00000545663 TRBV7-7A0A0K0K1E9 115 aa7.84□□□□□ -1.15
CLSTN3-216ENST00000545663 TRBV7-4A0A0J9YYF1 115 aa7.83□□□□□ -1.16
CLSTN3-216ENST00000545663 A0A1B0GW54 56 aa7.83□□□□□ -1.16
CLSTN3-216ENST00000545663 LOC110117498A0A087WWA1 95 aa7.8□□□□□ -1.16
CLSTN3-216ENST00000545663 F8W1H4 67 aa7.8□□□□□ -1.16
CLSTN3-216ENST00000545663 CCKP06307 115 aa7.8□□□□□ -1.16
CLSTN3-216ENST00000545663 OBSCN-AS1Q96MR7 158 aa7.79□□□□□ -1.16
CLSTN3-216ENST00000545663 A0A0G2JQZ4 141 aa7.78□□□□□ -1.16
CLSTN3-216ENST00000545663 A0A1B0GV72 72 aa7.78□□□□□ -1.16
CLSTN3-216ENST00000545663 A0A1W2PNM2 257 aa7.76□□□□□ -1.17
CLSTN3-216ENST00000545663 C1orf195Q5TG92 126 aa7.76□□□□□ -1.17
CLSTN3-216ENST00000545663 A0A087WSZ3 146 aa7.75□□□□□ -1.17
CLSTN3-216ENST00000545663 MTURNQ8N3F0 131 aa7.75□□□□□ -1.17
CLSTN3-216ENST00000545663 Q6ZQT0 140 aa7.74□□□□□ -1.17
CLSTN3-216ENST00000545663 VPS25Q9BRG1 176 aa7.74□□□□□ -1.17
CLSTN3-216ENST00000545663 PRO0461Q9UI25 63 aa7.74□□□□□ -1.17
CLSTN3-216ENST00000545663 C14orf132Q9NPU4 83 aa7.73□□□□□ -1.17
CLSTN3-216ENST00000545663 SMCPP49901 116 aaPredicted RBP7.71□□□□□ -1.18
CLSTN3-216ENST00000545663 MDN1Q9NU22 5596 aa7.69□□□□□ -1.18
CLSTN3-216ENST00000545663 ATP11AUNQ6ZP68 121 aa7.69□□□□□ -1.18
CLSTN3-216ENST00000545663 KMT2DO14686 5537 aa7.66□□□□□ -1.18
CLSTN3-216ENST00000545663 J3KT08 172 aa7.66□□□□□ -1.18
CLSTN3-216ENST00000545663 A0A1B0GV90 55 aa7.64□□□□□ -1.19
CLSTN3-216ENST00000545663 ETDBQ3ZM63 59 aa7.64□□□□□ -1.19
CLSTN3-216ENST00000545663 C20orf166-AS1Q96NR2 134 aa7.63□□□□□ -1.19
CLSTN3-216ENST00000545663 NREPQ16612 68 aa7.62□□□□□ -1.19
CLSTN3-216ENST00000545663 LINC00472Q9H8W2 130 aa7.62□□□□□ -1.19
CLSTN3-216ENST00000545663 IGKV4-1P06312 121 aa7.6□□□□□ -1.19
CLSTN3-216ENST00000545663 Q96NJ1 140 aa7.6□□□□□ -1.19
CLSTN3-216ENST00000545663 SIGMAR1Q99720 223 aa7.6□□□□□ -1.19
CLSTN3-216ENST00000545663 Q75L30 129 aa7.59□□□□□ -1.19
CLSTN3-216ENST00000545663 NDUFB1O75438 58 aa7.58□□□□□ -1.2
CLSTN3-216ENST00000545663 KRTAP2-3P0C7H8 128 aa7.57□□□□□ -1.2
CLSTN3-216ENST00000545663 KRTAP2-4Q9BYR9 128 aa7.57□□□□□ -1.2
CLSTN3-216ENST00000545663 UBL5Q9BZL1 73 aa7.57□□□□□ -1.2
CLSTN3-216ENST00000545663 ACYP1P07311 99 aa7.56□□□□□ -1.2
CLSTN3-216ENST00000545663 FAM236DA0A1B0GTK5 79 aa7.54□□□□□ -1.2
CLSTN3-216ENST00000545663 FAM236CP0DP71 79 aa7.54□□□□□ -1.2
CLSTN3-216ENST00000545663 C8orf87E5RJ46 101 aa7.53□□□□□ -1.2
CLSTN3-216ENST00000545663 FAM240AA0A1B0GVK7 77 aa7.52□□□□□ -1.21
CLSTN3-216ENST00000545663 A0A1B0GVX0 72 aa7.51□□□□□ -1.21
CLSTN3-216ENST00000545663 A8MWP4 228 aa7.51□□□□□ -1.21
CLSTN3-216ENST00000545663 J3QR89 54 aa7.51□□□□□ -1.21
CLSTN3-216ENST00000545663 BPY2O14599 106 aa7.51□□□□□ -1.21
CLSTN3-216ENST00000545663 LINC00313P59037 77 aa7.51□□□□□ -1.21
CLSTN3-216ENST00000545663 DEFB116Q30KQ4 102 aa7.51□□□□□ -1.21
CLSTN3-216ENST00000545663 Q6ZVQ6 151 aa7.51□□□□□ -1.21
CLSTN3-216ENST00000545663 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
CLSTN3-216ENST00000545663 PRR15Q8IV56 129 aa7.46□□□□□ -1.22
CLSTN3-216ENST00000545663 Q8N9P0 234 aaPredicted RBP7.46□□□□□ -1.22
CLSTN3-216ENST00000545663 KRTAP5-9P26371 169 aa7.45□□□□□ -1.22
CLSTN3-216ENST00000545663 IGKV3D-7A0A0C4DH55 119 aa7.43□□□□□ -1.22
CLSTN3-216ENST00000545663 DSCR10P59022 87 aa7.43□□□□□ -1.22
CLSTN3-216ENST00000545663 CXCL6P80162 114 aa7.43□□□□□ -1.22
CLSTN3-216ENST00000545663 GPR98Q8WXG9 6306 aa7.41□□□□□ -1.22
CLSTN3-216ENST00000545663 ATP5EP2Q5VTU8 51 aa7.41□□□□□ -1.22
CLSTN3-216ENST00000545663 KRTAP16-1A8MUX0 517 aa7.4□□□□□ -1.22
CLSTN3-216ENST00000545663 MPLKIPQ8TAP9 179 aa7.4□□□□□ -1.22
CLSTN3-216ENST00000545663 C8orf17Q9NRJ1 99 aa7.4□□□□□ -1.22
CLSTN3-216ENST00000545663 A8MUU9 505 aa7.39□□□□□ -1.23
CLSTN3-216ENST00000545663 K7EQZ3 153 aa7.38□□□□□ -1.23
CLSTN3-216ENST00000545663 HRES1P13985 223 aa7.36□□□□□ -1.23
CLSTN3-216ENST00000545663 LINC00643Q86TS7 51 aa7.36□□□□□ -1.23
CLSTN3-216ENST00000545663 K7ERU9 68 aa7.35□□□□□ -1.23
CLSTN3-216ENST00000545663 NOTCH2NLQ7Z3S9 236 aa7.35□□□□□ -1.23
CLSTN3-216ENST00000545663 TMEM254Q8TBM7 123 aa7.35□□□□□ -1.23
CLSTN3-216ENST00000545663 RBM12B-AS1Q9P1G2 102 aa7.35□□□□□ -1.23
CLSTN3-216ENST00000545663 hDV103S1A0JD37 113 aa7.34□□□□□ -1.23
CLSTN3-216ENST00000545663 MMP24-AS1A0A0U1RRL7 71 aa7.33□□□□□ -1.24
CLSTN3-216ENST00000545663 MRPL34Q9BQ48 92 aaKnown RBP7.33□□□□□ -1.24
CLSTN3-216ENST00000545663 A6NN06 94 aa7.32□□□□□ -1.24
CLSTN3-216ENST00000545663 HCG22E2RYF7 251 aa7.3□□□□□ -1.24
CLSTN3-216ENST00000545663 CASC2Q6XLA1 102 aa7.3□□□□□ -1.24
CLSTN3-216ENST00000545663 Q8N9L7 120 aa7.3□□□□□ -1.24
CLSTN3-216ENST00000545663 KRTAP2-2Q9BYT5 123 aa7.27□□□□□ -1.25
CLSTN3-216ENST00000545663 KRTAP2-1Q9BYU5 128 aa7.27□□□□□ -1.25
CLSTN3-216ENST00000545663 NDUFS5O43920 106 aa7.25□□□□□ -1.25
CLSTN3-216ENST00000545663 WFDC13Q8IUB5 93 aa7.25□□□□□ -1.25
CLSTN3-216ENST00000545663 ZCCHC13Q8WW36 166 aaKnown RBP7.25□□□□□ -1.25
CLSTN3-216ENST00000545663 HIST1H4AP62805 103 aaKnown RBP7.23□□□□□ -1.25
CLSTN3-216ENST00000545663 TP53AIP1Q9HCN2 124 aa7.22□□□□□ -1.25
CLSTN3-216ENST00000545663 SPRR2EP22531 72 aa7.17□□□□□ -1.26
CLSTN3-216ENST00000545663 SPRR2BP35325 72 aa7.17□□□□□ -1.26
CLSTN3-216ENST00000545663 SPRR2AP35326 72 aa7.17□□□□□ -1.26
CLSTN3-216ENST00000545663 IMUPQ9GZP8 106 aa7.17□□□□□ -1.26
CLSTN3-216ENST00000545663 MT1BP07438 61 aa7.1□□□□□ -1.27
CLSTN3-216ENST00000545663 SPINK7P58062 85 aa7.1□□□□□ -1.27
CLSTN3-216ENST00000545663 A0A087WVE0 104 aa7.09□□□□□ -1.27
CLSTN3-216ENST00000545663 UQCRQO14949 82 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms