RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 H3BQ85 93 aa4.06□□□□□ -1.76
SNHG1-223ENST00000545440 K7ERJ3 54 aa4.06□□□□□ -1.76
SNHG1-223ENST00000545440 FABP2P12104 132 aa4.06□□□□□ -1.76
SNHG1-223ENST00000545440 OBSCN-AS1Q96MR7 158 aa4.06□□□□□ -1.76
SNHG1-223ENST00000545440 A0A087WSZ3 146 aa4.05□□□□□ -1.76
SNHG1-223ENST00000545440 COX6CP09669 75 aa4.05□□□□□ -1.76
SNHG1-223ENST00000545440 PSMB2P49721 201 aa4.05□□□□□ -1.76
SNHG1-223ENST00000545440 MT1HP80294 61 aa4.05□□□□□ -1.76
SNHG1-223ENST00000545440 ORMDL1Q9P0S3 153 aa4.05□□□□□ -1.76
SNHG1-223ENST00000545440 Q96NJ1 140 aa4.04□□□□□ -1.76
SNHG1-223ENST00000545440 TMEM256-PLSCR3K7ERE1 68 aa4.03□□□□□ -1.76
SNHG1-223ENST00000545440 ATP11AUNQ6ZP68 121 aa4.03□□□□□ -1.76
SNHG1-223ENST00000545440 TRBV7-4A0A0J9YYF1 115 aa4.02□□□□□ -1.77
SNHG1-223ENST00000545440 A0A1W2PNM2 257 aa4.02□□□□□ -1.77
SNHG1-223ENST00000545440 TRACP01848 142 aa4.02□□□□□ -1.77
SNHG1-223ENST00000545440 ANKRD29Q8N6D5 301 aa4.02□□□□□ -1.77
SNHG1-223ENST00000545440 C20orf166-AS1Q96NR2 134 aa4.02□□□□□ -1.77
SNHG1-223ENST00000545440 COX6B2Q6YFQ2 88 aa4.01□□□□□ -1.77
SNHG1-223ENST00000545440 SIGMAR1Q99720 223 aa4.01□□□□□ -1.77
SNHG1-223ENST00000545440 A8MUU9 505 aa4□□□□□ -1.77
SNHG1-223ENST00000545440 A0A1B0GV72 72 aa3.99□□□□□ -1.77
SNHG1-223ENST00000545440 CCKP06307 115 aa3.99□□□□□ -1.77
SNHG1-223ENST00000545440 FLGP20930 4061 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-223ENST00000545440 M0R143 59 aa3.97□□□□□ -1.77
SNHG1-223ENST00000545440 IGKV4-1P06312 121 aa3.97□□□□□ -1.77
SNHG1-223ENST00000545440 SCGB1C2P0DMR2 95 aa3.97□□□□□ -1.77
SNHG1-223ENST00000545440 DSCR10P59022 87 aa3.97□□□□□ -1.77
SNHG1-223ENST00000545440 KRTAP10-6P60371 365 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-223ENST00000545440 LINC00472Q9H8W2 130 aa3.97□□□□□ -1.77
SNHG1-223ENST00000545440 M0R2T5 61 aa3.96□□□□□ -1.78
SNHG1-223ENST00000545440 SMIM6P0DI80 62 aa3.96□□□□□ -1.78
SNHG1-223ENST00000545440 RBM3P98179 157 aaKnown RBP3.96□□□□□ -1.78
SNHG1-223ENST00000545440 DSCR8Q96T75 97 aa3.96□□□□□ -1.78
SNHG1-223ENST00000545440 LINC00313P59037 77 aa3.95□□□□□ -1.78
SNHG1-223ENST00000545440 MTURNQ8N3F0 131 aa3.95□□□□□ -1.78
SNHG1-223ENST00000545440 VPS25Q9BRG1 176 aa3.94□□□□□ -1.78
SNHG1-223ENST00000545440 C9JAW5 83 aa3.93□□□□□ -1.78
SNHG1-223ENST00000545440 BAALC-AS2P0C853 105 aa3.93□□□□□ -1.78
SNHG1-223ENST00000545440 ATXN8Q156A1 80 aa3.93□□□□□ -1.78
SNHG1-223ENST00000545440 TRBV20-1A0A075B6N2 111 aa3.92□□□□□ -1.78
SNHG1-223ENST00000545440 IGHV6-1A0A0B4J1U7 121 aa3.92□□□□□ -1.78
SNHG1-223ENST00000545440 A0A1B0GVX0 72 aa3.92□□□□□ -1.78
SNHG1-223ENST00000545440 C8orf87E5RJ46 101 aa3.92□□□□□ -1.78
SNHG1-223ENST00000545440 DEFB116Q30KQ4 102 aa3.92□□□□□ -1.78
SNHG1-223ENST00000545440 LYRM7Q5U5X0 104 aa3.92□□□□□ -1.78
SNHG1-223ENST00000545440 A0A1B0GW54 56 aa3.91□□□□□ -1.78
SNHG1-223ENST00000545440 JMJD7-PLA2G4BH0Y9G9 81 aa3.91□□□□□ -1.78
SNHG1-223ENST00000545440 J3KT08 172 aa3.91□□□□□ -1.78
SNHG1-223ENST00000545440 LOC110117498A0A087WWA1 95 aa3.9□□□□□ -1.79
SNHG1-223ENST00000545440 TSTD3H0UI37 97 aa3.9□□□□□ -1.79
SNHG1-223ENST00000545440 Q6ZQT0 140 aa3.9□□□□□ -1.79
SNHG1-223ENST00000545440 NAA38Q9BRA0 125 aaKnown RBP3.9□□□□□ -1.79
SNHG1-223ENST00000545440 PDE6GP18545 87 aa3.89□□□□□ -1.79
SNHG1-223ENST00000545440 CXCL6P80162 114 aa3.89□□□□□ -1.79
SNHG1-223ENST00000545440 CRCT1Q9UGL9 99 aa3.89□□□□□ -1.79
SNHG1-223ENST00000545440 NDUFB1O75438 58 aa3.87□□□□□ -1.79
SNHG1-223ENST00000545440 A8MWP4 228 aa3.86□□□□□ -1.79
SNHG1-223ENST00000545440 HRES1P13985 223 aa3.86□□□□□ -1.79
SNHG1-223ENST00000545440 C14orf132Q9NPU4 83 aa3.86□□□□□ -1.79
SNHG1-223ENST00000545440 RBM12B-AS1Q9P1G2 102 aa3.86□□□□□ -1.79
SNHG1-223ENST00000545440 FAM236DA0A1B0GTK5 79 aa3.85□□□□□ -1.79
SNHG1-223ENST00000545440 FAM236CP0DP71 79 aa3.85□□□□□ -1.79
SNHG1-223ENST00000545440 BATFQ16520 125 aa3.85□□□□□ -1.79
SNHG1-223ENST00000545440 ZCCHC13Q8WW36 166 aaKnown RBP3.85□□□□□ -1.79
SNHG1-223ENST00000545440 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
SNHG1-223ENST00000545440 H3BT86 120 aa3.84□□□□□ -1.79
SNHG1-223ENST00000545440 C8orf17Q9NRJ1 99 aa3.83□□□□□ -1.8
SNHG1-223ENST00000545440 IGKV3D-7A0A0C4DH55 119 aa3.82□□□□□ -1.8
SNHG1-223ENST00000545440 LOC105371267A0A1B0GV96 52 aa3.82□□□□□ -1.8
SNHG1-223ENST00000545440 A0A1W2PPM0 123 aa3.81□□□□□ -1.8
SNHG1-223ENST00000545440 PCP4L1A6NKN8 68 aa3.81□□□□□ -1.8
SNHG1-223ENST00000545440 TAX1BP3O14907 124 aa3.81□□□□□ -1.8
SNHG1-223ENST00000545440 NREPQ16612 68 aa3.81□□□□□ -1.8
SNHG1-223ENST00000545440 PRR15Q8IV56 129 aa3.81□□□□□ -1.8
SNHG1-223ENST00000545440 SPINK7P58062 85 aa3.8□□□□□ -1.8
SNHG1-223ENST00000545440 MMP24-AS1A0A0U1RRL7 71 aa3.79□□□□□ -1.8
SNHG1-223ENST00000545440 TMEM254Q8TBM7 123 aa3.79□□□□□ -1.8
SNHG1-223ENST00000545440 MRPL34Q9BQ48 92 aaKnown RBP3.78□□□□□ -1.8
SNHG1-223ENST00000545440 K7EQZ3 153 aa3.77□□□□□ -1.81
SNHG1-223ENST00000545440 MT2AP02795 61 aa3.77□□□□□ -1.81
SNHG1-223ENST00000545440 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
SNHG1-223ENST00000545440 WFDC13Q8IUB5 93 aa3.77□□□□□ -1.81
SNHG1-223ENST00000545440 hDV103S1A0JD37 113 aa3.76□□□□□ -1.81
SNHG1-223ENST00000545440 SPCS1Q9Y6A9 102 aa3.76□□□□□ -1.81
SNHG1-223ENST00000545440 BPY2O14599 106 aa3.75□□□□□ -1.81
SNHG1-223ENST00000545440 MT1FP04733 61 aa3.74□□□□□ -1.81
SNHG1-223ENST00000545440 NDUFS5O43920 106 aa3.73□□□□□ -1.81
SNHG1-223ENST00000545440 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
SNHG1-223ENST00000545440 COL5A1-AS1Q5SY13 56 aa3.73□□□□□ -1.81
SNHG1-223ENST00000545440 K7EP34 96 aa3.71□□□□□ -1.82
SNHG1-223ENST00000545440 PRO0461Q9UI25 63 aa3.71□□□□□ -1.82
SNHG1-223ENST00000545440 A8MU10 97 aa3.7□□□□□ -1.82
SNHG1-223ENST00000545440 KRTAP10-10P60014 251 aa3.7□□□□□ -1.82
SNHG1-223ENST00000545440 KRTAP10-7P60409 375 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-223ENST00000545440 CASC2Q6XLA1 102 aa3.7□□□□□ -1.82
SNHG1-223ENST00000545440 C7orf65Q6ZTY9 151 aa3.7□□□□□ -1.82
SNHG1-223ENST00000545440 Q8N9L7 120 aa3.7□□□□□ -1.82
SNHG1-223ENST00000545440 UBL5Q9BZL1 73 aa3.69□□□□□ -1.82
SNHG1-223ENST00000545440 HCG22E2RYF7 251 aa3.68□□□□□ -1.82
SNHG1-223ENST00000545440 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms