RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 RBM12B-AS1Q9P1G2 102 aa7.56□□□□□ -1.2
CD4-212ENST00000544344 SS18L2Q9UHA2 77 aa7.56□□□□□ -1.2
CD4-212ENST00000544344 PRO0461Q9UI25 63 aa7.56□□□□□ -1.2
CD4-212ENST00000544344 NOTCH2NLQ7Z3S9 236 aa7.55□□□□□ -1.2
CD4-212ENST00000544344 H3BMG7 143 aa7.54□□□□□ -1.2
CD4-212ENST00000544344 COX6CP09669 75 aa7.53□□□□□ -1.2
CD4-212ENST00000544344 TEN1Q86WV5 123 aa7.52□□□□□ -1.21
CD4-212ENST00000544344 A0A087WSZ3 146 aa7.51□□□□□ -1.21
CD4-212ENST00000544344 J3QR89 54 aa7.51□□□□□ -1.21
CD4-212ENST00000544344 SCGB1C2P0DMR2 95 aa7.51□□□□□ -1.21
CD4-212ENST00000544344 PSMB2P49721 201 aa7.51□□□□□ -1.21
CD4-212ENST00000544344 ATXN8Q156A1 80 aa7.51□□□□□ -1.21
CD4-212ENST00000544344 TRIAP1O43715 76 aa7.49□□□□□ -1.21
CD4-212ENST00000544344 SMCPP49901 116 aaPredicted RBP7.47□□□□□ -1.21
CD4-212ENST00000544344 LINC00313P59037 77 aa7.47□□□□□ -1.21
CD4-212ENST00000544344 NEBP20929 6669 aa7.46□□□□□ -1.22
CD4-212ENST00000544344 H3BT86 120 aa7.45□□□□□ -1.22
CD4-212ENST00000544344 TRACP01848 142 aa7.44□□□□□ -1.22
CD4-212ENST00000544344 ETDBQ3ZM63 59 aa7.44□□□□□ -1.22
CD4-212ENST00000544344 SIGMAR1Q99720 223 aa7.44□□□□□ -1.22
CD4-212ENST00000544344 NDUFV3P56181 108 aaKnown RBP7.43□□□□□ -1.22
CD4-212ENST00000544344 ANKRD29Q8N6D5 301 aa7.43□□□□□ -1.22
CD4-212ENST00000544344 C9JAW5 83 aa7.42□□□□□ -1.22
CD4-212ENST00000544344 H0YGX0 51 aa7.42□□□□□ -1.22
CD4-212ENST00000544344 A0A1W2PNM2 257 aa7.4□□□□□ -1.22
CD4-212ENST00000544344 VPS25Q9BRG1 176 aa7.4□□□□□ -1.22
CD4-212ENST00000544344 IGKV4-1P06312 121 aa7.39□□□□□ -1.23
CD4-212ENST00000544344 Q8N9P0 234 aaPredicted RBP7.39□□□□□ -1.23
CD4-212ENST00000544344 A0A1B0GX51 115 aa7.38□□□□□ -1.23
CD4-212ENST00000544344 MTURNQ8N3F0 131 aa7.38□□□□□ -1.23
CD4-212ENST00000544344 A8MWP4 228 aa7.37□□□□□ -1.23
CD4-212ENST00000544344 FAM218AQ96MZ4 157 aa7.37□□□□□ -1.23
CD4-212ENST00000544344 DEFB116Q30KQ4 102 aa7.33□□□□□ -1.24
CD4-212ENST00000544344 LINC00472Q9H8W2 130 aa7.33□□□□□ -1.24
CD4-212ENST00000544344 SPINK7P58062 85 aa7.32□□□□□ -1.24
CD4-212ENST00000544344 IGHV6-1A0A0B4J1U7 121 aa7.31□□□□□ -1.24
CD4-212ENST00000544344 FAM240AA0A1B0GVK7 77 aa7.31□□□□□ -1.24
CD4-212ENST00000544344 MUC12Q9UKN1 5478 aa7.31□□□□□ -1.24
CD4-212ENST00000544344 SNCGO76070 127 aa7.3□□□□□ -1.24
CD4-212ENST00000544344 TRBV7-4A0A0J9YYF1 115 aa7.29□□□□□ -1.24
CD4-212ENST00000544344 H3BQ85 93 aa7.29□□□□□ -1.24
CD4-212ENST00000544344 DNAL4O96015 105 aa7.29□□□□□ -1.24
CD4-212ENST00000544344 BAALC-AS2P0C853 105 aa7.29□□□□□ -1.24
CD4-212ENST00000544344 SCGB1A1P11684 91 aa7.29□□□□□ -1.24
CD4-212ENST00000544344 ZCCHC13Q8WW36 166 aaKnown RBP7.29□□□□□ -1.24
CD4-212ENST00000544344 ACYP1P07311 99 aa7.28□□□□□ -1.24
CD4-212ENST00000544344 KRTAP20-1Q3LI63 56 aa7.26□□□□□ -1.25
CD4-212ENST00000544344 ORMDL1Q9P0S3 153 aa7.24□□□□□ -1.25
CD4-212ENST00000544344 GHRHP01286 108 aa7.23□□□□□ -1.25
CD4-212ENST00000544344 WFDC13Q8IUB5 93 aa7.23□□□□□ -1.25
CD4-212ENST00000544344 A0A1B0GVX0 72 aa7.22□□□□□ -1.25
CD4-212ENST00000544344 C8orf87E5RJ46 101 aa7.22□□□□□ -1.25
CD4-212ENST00000544344 TMEM256-PLSCR3K7ERE1 68 aa7.21□□□□□ -1.26
CD4-212ENST00000544344 PCP4P48539 62 aa7.21□□□□□ -1.26
CD4-212ENST00000544344 JMJD7-PLA2G4BH0Y9G9 81 aa7.2□□□□□ -1.26
CD4-212ENST00000544344 A0A1B0GV72 72 aa7.19□□□□□ -1.26
CD4-212ENST00000544344 C21orf62-AS1Q17RA5 79 aa7.19□□□□□ -1.26
CD4-212ENST00000544344 CCKP06307 115 aa7.17□□□□□ -1.26
CD4-212ENST00000544344 MT-ATP8P03928 68 aa7.14□□□□□ -1.27
CD4-212ENST00000544344 LINC00643Q86TS7 51 aa7.14□□□□□ -1.27
CD4-212ENST00000544344 IMUPQ9GZP8 106 aa7.14□□□□□ -1.27
CD4-212ENST00000544344 PDE6GP18545 87 aa7.13□□□□□ -1.27
CD4-212ENST00000544344 A6NN06 94 aa7.12□□□□□ -1.27
CD4-212ENST00000544344 LOC110117498A0A087WWA1 95 aa7.11□□□□□ -1.27
CD4-212ENST00000544344 KRTAP5-9P26371 169 aa7.1□□□□□ -1.27
CD4-212ENST00000544344 H1FX-AS1Q4G0G2 97 aa7.1□□□□□ -1.27
CD4-212ENST00000544344 MT1BP07438 61 aa7.09□□□□□ -1.27
CD4-212ENST00000544344 C14orf132Q9NPU4 83 aa7.09□□□□□ -1.27
CD4-212ENST00000544344 RBM3P98179 157 aaKnown RBP7.07□□□□□ -1.28
CD4-212ENST00000544344 KMT2DO14686 5537 aa7.07□□□□□ -1.28
CD4-212ENST00000544344 J3KT08 172 aa7.05□□□□□ -1.28
CD4-212ENST00000544344 Q6ZQT0 140 aa7.04□□□□□ -1.28
CD4-212ENST00000544344 MDN1Q9NU22 5596 aa7.03□□□□□ -1.28
CD4-212ENST00000544344 A0A1B0GW54 56 aa7.03□□□□□ -1.28
CD4-212ENST00000544344 ATP5EP2Q5VTU8 51 aa7.03□□□□□ -1.28
CD4-212ENST00000544344 DSCR8Q96T75 97 aa7.03□□□□□ -1.28
CD4-212ENST00000544344 C8orf17Q9NRJ1 99 aa7.03□□□□□ -1.28
CD4-212ENST00000544344 IGKV3D-7A0A0C4DH55 119 aa7.01□□□□□ -1.29
CD4-212ENST00000544344 KRTAP10-5P60370 271 aa7□□□□□ -1.29
CD4-212ENST00000544344 NDUFB1O75438 58 aa6.99□□□□□ -1.29
CD4-212ENST00000544344 KRTAP19-8Q3LI54 63 aa6.99□□□□□ -1.29
CD4-212ENST00000544344 UBL5Q9BZL1 73 aa6.98□□□□□ -1.29
CD4-212ENST00000544344 Q5VV11 94 aa6.97□□□□□ -1.29
CD4-212ENST00000544344 Q6ZVQ6 151 aa6.97□□□□□ -1.29
CD4-212ENST00000544344 KRTAP2-3P0C7H8 128 aa6.95□□□□□ -1.3
CD4-212ENST00000544344 ANAPC13Q9BS18 74 aa6.95□□□□□ -1.3
CD4-212ENST00000544344 KRTAP2-4Q9BYR9 128 aa6.95□□□□□ -1.3
CD4-212ENST00000544344 HIST1H4AP62805 103 aaKnown RBP6.94□□□□□ -1.3
CD4-212ENST00000544344 SPRR2GQ9BYE4 73 aa6.94□□□□□ -1.3
CD4-212ENST00000544344 CXCL6P80162 114 aa6.92□□□□□ -1.3
CD4-212ENST00000544344 FAM236AA0A1B0GUQ0 79 aa6.89□□□□□ -1.31
CD4-212ENST00000544344 FAM236BA0A1B0GV22 79 aa6.89□□□□□ -1.31
CD4-212ENST00000544344 ATOX1O00244 68 aa6.88□□□□□ -1.31
CD4-212ENST00000544344 MRPL34Q9BQ48 92 aaKnown RBP6.88□□□□□ -1.31
CD4-212ENST00000544344 MMP24-AS1A0A0U1RRL7 71 aa6.87□□□□□ -1.31
CD4-212ENST00000544344 PRR15Q8IV56 129 aa6.87□□□□□ -1.31
CD4-212ENST00000544344 TMEM254Q8TBM7 123 aa6.86□□□□□ -1.31
CD4-212ENST00000544344 IGKV2D-30A0A075B6S6 120 aa6.85□□□□□ -1.31
CD4-212ENST00000544344 IGKV2-30P06310 120 aa6.85□□□□□ -1.31
CD4-212ENST00000544344 C5orf47Q569G3 176 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms