RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 SPACA4Q8TDM5 124 aa14.1□□□□□ -0.15
SHD-201ENST00000543264 Q5W150 140 aa14.09□□□□□ -0.15
SHD-201ENST00000543264 SPINK6Q6UWN8 80 aa14.09□□□□□ -0.15
SHD-201ENST00000543264 C7orf65Q6ZTY9 151 aa14.08□□□□□ -0.16
SHD-201ENST00000543264 NBDYA0A0U1RRE5 68 aa14.08□□□□□ -0.16
SHD-201ENST00000543264 ZNF706Q9Y5V0 76 aaPredicted RBP14.08□□□□□ -0.16
SHD-201ENST00000543264 MDFIQ99750 246 aa14.05□□□□□ -0.16
SHD-201ENST00000543264 Q6ZRN7 208 aaPredicted RBP14.04□□□□□ -0.16
SHD-201ENST00000543264 PSORS1C2Q9UIG4 136 aa14.04□□□□□ -0.16
SHD-201ENST00000543264 PLECQ15149 4684 aaKnown RBP13.97□□□□□ -0.17
SHD-201ENST00000543264 IGLV5-52A0A0A0MRZ9 124 aa13.97□□□□□ -0.17
SHD-201ENST00000543264 FRAS1Q86XX4 4008 aa13.97□□□□□ -0.17
SHD-201ENST00000543264 ACYP2P14621 99 aa13.96□□□□□ -0.17
SHD-201ENST00000543264 KRTAP13-3Q3SY46 172 aa13.96□□□□□ -0.17
SHD-201ENST00000543264 DNAH8Q96JB1 4490 aa13.95□□□□□ -0.18
SHD-201ENST00000543264 ZNF861PO60384 105 aa13.95□□□□□ -0.18
SHD-201ENST00000543264 DYNC2H1Q8NCM8 4307 aaKnown RBP13.9□□□□□ -0.18
SHD-201ENST00000543264 CIRBP-AS1Q8TBR5 109 aa13.9□□□□□ -0.18
SHD-201ENST00000543264 ALMS1Q8TCU4 4167 aa13.88□□□□□ -0.19
SHD-201ENST00000543264 A0A087WTM6 91 aa13.87□□□□□ -0.19
SHD-201ENST00000543264 RETNLBQ9BQ08 111 aa13.85□□□□□ -0.19
SHD-201ENST00000543264 RTL8CO15255 209 aa13.84□□□□□ -0.19
SHD-201ENST00000543264 HECTD4Q9Y4D8 3996 aa13.82□□□□□ -0.2
SHD-201ENST00000543264 LINC00313P59037 77 aa13.81□□□□□ -0.2
SHD-201ENST00000543264 DMAC1Q96GE9 116 aa13.81□□□□□ -0.2
SHD-201ENST00000543264 PRAC1Q96KF2 57 aa13.78□□□□□ -0.2
SHD-201ENST00000543264 A0A1B0GU69 56 aa13.78□□□□□ -0.2
SHD-201ENST00000543264 C8orf87E5RJ46 101 aa13.76□□□□□ -0.21
SHD-201ENST00000543264 NUPR2A6NF83 97 aa13.74□□□□□ -0.21
SHD-201ENST00000543264 IGLV7-43P04211 117 aa13.72□□□□□ -0.21
SHD-201ENST00000543264 ADM2Q7Z4H4 148 aa13.72□□□□□ -0.21
SHD-201ENST00000543264 FAM229AH3BQW9 127 aa13.7□□□□□ -0.22
SHD-201ENST00000543264 DNAH17Q9UFH2 4485 aa13.7□□□□□ -0.22
SHD-201ENST00000543264 VPS13DQ5THJ4 4388 aa13.66□□□□□ -0.22
SHD-201ENST00000543264 IGKV2-30P06310 120 aa13.66□□□□□ -0.22
SHD-201ENST00000543264 SSBP3-AS1Q7Z2R9 100 aa13.65□□□□□ -0.22
SHD-201ENST00000543264 DNHD1Q96M86 4753 aa13.65□□□□□ -0.22
SHD-201ENST00000543264 SPATA8Q6RVD6 105 aa13.65□□□□□ -0.22
SHD-201ENST00000543264 STARD9Q9P2P6 4700 aa13.63□□□□□ -0.23
SHD-201ENST00000543264 PLA2G1BP04054 148 aaKnown RBP13.62□□□□□ -0.23
SHD-201ENST00000543264 MIR22HGQ0VDD5 57 aa13.6□□□□□ -0.23
SHD-201ENST00000543264 DNAH2Q9P225 4427 aa13.58□□□□□ -0.24
SHD-201ENST00000543264 KMT2AQ03164 3969 aa13.57□□□□□ -0.24
SHD-201ENST00000543264 UQCR11O14957 56 aa13.57□□□□□ -0.24
SHD-201ENST00000543264 TGP01266 2768 aa13.56□□□□□ -0.24
SHD-201ENST00000543264 FBN3Q75N90 2809 aa13.55□□□□□ -0.24
SHD-201ENST00000543264 MEGF8Q7Z7M0 2845 aa13.55□□□□□ -0.24
SHD-201ENST00000543264 IGKV2D-30A0A075B6S6 120 aa13.54□□□□□ -0.24
SHD-201ENST00000543264 KRTAP16-1A8MUX0 517 aa13.48□□□□□ -0.25
SHD-201ENST00000543264 KRTAP13-2Q52LG2 175 aa13.46□□□□□ -0.26
SHD-201ENST00000543264 LINC01554Q52M75 96 aa13.42□□□□□ -0.26
SHD-201ENST00000543264 PRKDCP78527 4128 aaKnown RBP13.42□□□□□ -0.26
SHD-201ENST00000543264 C1orf134Q5TEV5 83 aa13.41□□□□□ -0.26
SHD-201ENST00000543264 DNAH11Q96DT5 4516 aa13.38□□□□□ -0.27
SHD-201ENST00000543264 DNAH6Q9C0G6 4158 aa13.37□□□□□ -0.27
SHD-201ENST00000543264 SPINK1P00995 79 aa13.36□□□□□ -0.27
SHD-201ENST00000543264 CSAG1Q6PB30 78 aa13.3□□□□□ -0.28
SHD-201ENST00000543264 KRTAP10-2P60368 255 aa13.27□□□□□ -0.29
SHD-201ENST00000543264 Q8N1X5 172 aa13.27□□□□□ -0.29
SHD-201ENST00000543264 DNAH5Q8TE73 4624 aa13.24□□□□□ -0.29
SHD-201ENST00000543264 LY6G6CO95867 125 aa13.21□□□□□ -0.29
SHD-201ENST00000543264 LRP1BQ9NZR2 4599 aa13.19□□□□□ -0.3
SHD-201ENST00000543264 C4orf48Q5BLP8 95 aa13.18□□□□□ -0.3
SHD-201ENST00000543264 KRTAP1-4P0C5Y4 121 aa13.17□□□□□ -0.3
SHD-201ENST00000543264 KRTAP10-1P60331 282 aa13.1□□□□□ -0.31
SHD-201ENST00000543264 TYMSOSQ8TAI1 123 aa13.08□□□□□ -0.32
SHD-201ENST00000543264 Q6ZSA8 131 aa13.06□□□□□ -0.32
SHD-201ENST00000543264 H0YAA0 97 aa13.02□□□□□ -0.32
SHD-201ENST00000543264 VPS13BQ7Z7G8 4022 aa13.02□□□□□ -0.33
SHD-201ENST00000543264 A8MUU9 505 aa12.95□□□□□ -0.34
SHD-201ENST00000543264 PKD1P98161 4303 aa12.93□□□□□ -0.34
SHD-201ENST00000543264 A0A1B0GU33 70 aa12.9□□□□□ -0.34
SHD-201ENST00000543264 LINC00304Q8N9R0 145 aa12.9□□□□□ -0.34
SHD-201ENST00000543264 KRTAP21-3Q3LHN1 58 aa12.89□□□□□ -0.35
SHD-201ENST00000543264 H3BS24 57 aa12.87□□□□□ -0.35
SHD-201ENST00000543264 C9orf92A6NGG3 77 aa12.85□□□□□ -0.35
SHD-201ENST00000543264 KRTAP3-1Q9BYR8 98 aa12.84□□□□□ -0.35
SHD-201ENST00000543264 KRTAP25-1Q3LHN0 102 aa12.82□□□□□ -0.36
SHD-201ENST00000543264 H1FX-AS1Q4G0G2 97 aa12.81□□□□□ -0.36
SHD-201ENST00000543264 FAT2Q9NYQ8 4349 aa12.79□□□□□ -0.36
SHD-201ENST00000543264 FLG2Q5D862 2391 aaPredicted RBP12.78□□□□□ -0.36
SHD-201ENST00000543264 HYDINQ4G0P3 5121 aa12.74□□□□□ -0.37
SHD-201ENST00000543264 RPS29P62273 56 aaKnown RBP12.71□□□□□ -0.38
SHD-201ENST00000543264 C20orf166-AS1Q96NR2 134 aa12.71□□□□□ -0.38
SHD-201ENST00000543264 CRIPTQ9P021 101 aa12.68□□□□□ -0.38
SHD-201ENST00000543264 K7ERS5 55 aa12.6□□□□□ -0.39
SHD-201ENST00000543264 ROMO1P60602 79 aa12.6□□□□□ -0.39
SHD-201ENST00000543264 COX6B2Q6YFQ2 88 aa12.59□□□□□ -0.39
SHD-201ENST00000543264 SMR3BP02814 79 aaPredicted RBP12.56□□□□□ -0.4
SHD-201ENST00000543264 SACSQ9NZJ4 4579 aa12.54□□□□□ -0.4
SHD-201ENST00000543264 PKHD1P08F94 4074 aa12.52□□□□□ -0.41
SHD-201ENST00000543264 FAT1Q14517 4588 aa12.37□□□□□ -0.43
SHD-201ENST00000543264 PKHD1L1Q86WI1 4243 aa12.36□□□□□ -0.43
SHD-201ENST00000543264 A0A0D9SG42 100 aa12.32□□□□□ -0.44
SHD-201ENST00000543264 RPL37P61927 97 aaKnown RBP12.32□□□□□ -0.44
SHD-201ENST00000543264 DMBT1Q9UGM3 2413 aaPredicted RBP12.31□□□□□ -0.44
SHD-201ENST00000543264 KRTAP10-6P60371 365 aaPredicted RBP12.3□□□□□ -0.44
SHD-201ENST00000543264 DYNC1H1Q14204 4646 aaKnown RBP12.29□□□□□ -0.44
SHD-201ENST00000543264 KRTAP13-4Q3LI77 160 aa12.28□□□□□ -0.44
SHD-201ENST00000543264 P0C880 135 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms