RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 TRAV22A0A0B4J277 110 aa4.63□□□□□ -1.67
LRP6-206ENST00000543091 FP248Q71RG6 208 aaPredicted RBP4.62□□□□□ -1.67
LRP6-206ENST00000543091 PCOTHQ58A44 107 aa4.62□□□□□ -1.67
LRP6-206ENST00000543091 OCR1Q9BZK8 76 aa4.61□□□□□ -1.67
LRP6-206ENST00000543091 A0A087X002 238 aa4.61□□□□□ -1.67
LRP6-206ENST00000543091 A0A1B0GVY2 172 aa4.61□□□□□ -1.67
LRP6-206ENST00000543091 LOC101927531A0A1B0GV80 90 aa4.6□□□□□ -1.67
LRP6-206ENST00000543091 ASB16-AS1Q495Z4 193 aa4.6□□□□□ -1.67
LRP6-206ENST00000543091 KRTAP13-1Q8IUC0 172 aa4.6□□□□□ -1.67
LRP6-206ENST00000543091 CDC42SE1Q9NRR8 79 aa4.6□□□□□ -1.67
LRP6-206ENST00000543091 RPS29P62273 56 aaKnown RBP4.58□□□□□ -1.68
LRP6-206ENST00000543091 SEC61BP60468 96 aaKnown RBP4.58□□□□□ -1.68
LRP6-206ENST00000543091 RBM12B-AS1Q9P1G2 102 aa4.57□□□□□ -1.68
LRP6-206ENST00000543091 ACYP2P14621 99 aa4.57□□□□□ -1.68
LRP6-206ENST00000543091 TRRAPQ9Y4A5 3859 aa4.57□□□□□ -1.68
LRP6-206ENST00000543091 Q75L30 129 aa4.54□□□□□ -1.68
LRP6-206ENST00000543091 LINC00472Q9H8W2 130 aa4.54□□□□□ -1.68
LRP6-206ENST00000543091 AKAP9Q99996 3911 aa4.54□□□□□ -1.68
LRP6-206ENST00000543091 A8MUN3 132 aa4.53□□□□□ -1.68
LRP6-206ENST00000543091 KRTAP13-2Q52LG2 175 aa4.53□□□□□ -1.68
LRP6-206ENST00000543091 SVEP1Q4LDE5 3571 aa4.53□□□□□ -1.68
LRP6-206ENST00000543091 A0A1B0GU69 56 aa4.52□□□□□ -1.69
LRP6-206ENST00000543091 COA5Q86WW8 74 aa4.51□□□□□ -1.69
LRP6-206ENST00000543091 CYSTM1Q9H1C7 97 aa4.5□□□□□ -1.69
LRP6-206ENST00000543091 ZNF469Q96JG9 3925 aaPredicted RBP4.49□□□□□ -1.69
LRP6-206ENST00000543091 ZCCHC13Q8WW36 166 aaKnown RBP4.49□□□□□ -1.69
LRP6-206ENST00000543091 MMP24-AS1A0A0U1RRL7 71 aa4.48□□□□□ -1.69
LRP6-206ENST00000543091 UQCR11O14957 56 aa4.48□□□□□ -1.69
LRP6-206ENST00000543091 MEGF8Q7Z7M0 2845 aa4.47□□□□□ -1.69
LRP6-206ENST00000543091 KRTAP1-4P0C5Y4 121 aa4.47□□□□□ -1.69
LRP6-206ENST00000543091 LINC01558Q9Y6Z2 57 aa4.45□□□□□ -1.7
LRP6-206ENST00000543091 KRTAP29-1A8MX34 341 aaPredicted RBP4.44□□□□□ -1.7
LRP6-206ENST00000543091 LINC01554Q52M75 96 aa4.44□□□□□ -1.7
LRP6-206ENST00000543091 M0R2T5 61 aa4.41□□□□□ -1.7
LRP6-206ENST00000543091 MIR22HGQ0VDD5 57 aa4.41□□□□□ -1.7
LRP6-206ENST00000543091 SPINK7P58062 85 aa4.4□□□□□ -1.7
LRP6-206ENST00000543091 Q8N9P0 234 aaPredicted RBP4.4□□□□□ -1.71
LRP6-206ENST00000543091 Q5VV11 94 aa4.38□□□□□ -1.71
LRP6-206ENST00000543091 VPS13CQ709C8 3753 aa4.38□□□□□ -1.71
LRP6-206ENST00000543091 COL7A1Q02388 2944 aa4.37□□□□□ -1.71
LRP6-206ENST00000543091 H3BS24 57 aa4.37□□□□□ -1.71
LRP6-206ENST00000543091 KRTAP10-8P60410 259 aa4.37□□□□□ -1.71
LRP6-206ENST00000543091 Q5W150 140 aa4.37□□□□□ -1.71
LRP6-206ENST00000543091 HUWE1Q7Z6Z7 4374 aaKnown RBP4.35□□□□□ -1.71
LRP6-206ENST00000543091 RPL37P61927 97 aaKnown RBP4.35□□□□□ -1.71
LRP6-206ENST00000543091 DNHD1Q96M86 4753 aa4.34□□□□□ -1.71
LRP6-206ENST00000543091 HRES1P13985 223 aa4.33□□□□□ -1.72
LRP6-206ENST00000543091 TPRXLQ17RH7 258 aa4.33□□□□□ -1.72
LRP6-206ENST00000543091 CSAG1Q6PB30 78 aa4.31□□□□□ -1.72
LRP6-206ENST00000543091 NOTCH2NLQ7Z3S9 236 aa4.31□□□□□ -1.72
LRP6-206ENST00000543091 DNAH9Q9NYC9 4486 aa4.31□□□□□ -1.72
LRP6-206ENST00000543091 DMAC1Q96GE9 116 aa4.3□□□□□ -1.72
LRP6-206ENST00000543091 A6NN06 94 aa4.29□□□□□ -1.72
LRP6-206ENST00000543091 CUBNO60494 3623 aa4.29□□□□□ -1.72
LRP6-206ENST00000543091 A8MUU9 505 aa4.29□□□□□ -1.72
LRP6-206ENST00000543091 SPINT4Q6UDR6 99 aa4.28□□□□□ -1.72
LRP6-206ENST00000543091 S4R3F8 94 aa4.28□□□□□ -1.72
LRP6-206ENST00000543091 C20orf166-AS1Q96NR2 134 aa4.28□□□□□ -1.72
LRP6-206ENST00000543091 XP32Q5T750 250 aa4.27□□□□□ -1.73
LRP6-206ENST00000543091 SRRM2Q9UQ35 2752 aaKnown RBP4.26□□□□□ -1.73
LRP6-206ENST00000543091 ALMS1Q8TCU4 4167 aa4.26□□□□□ -1.73
LRP6-206ENST00000543091 KRTAP13-3Q3SY46 172 aa4.24□□□□□ -1.73
LRP6-206ENST00000543091 ANK2Q01484 3957 aa4.23□□□□□ -1.73
LRP6-206ENST00000543091 CRIPTQ9P021 101 aa4.22□□□□□ -1.73
LRP6-206ENST00000543091 H1FX-AS1Q4G0G2 97 aa4.21□□□□□ -1.74
LRP6-206ENST00000543091 SPATA8Q6RVD6 105 aa4.19□□□□□ -1.74
LRP6-206ENST00000543091 KRTAP10-4P60372 401 aaPredicted RBP4.19□□□□□ -1.74
LRP6-206ENST00000543091 MT1HL1P0DM35 61 aa4.17□□□□□ -1.74
LRP6-206ENST00000543091 KRTAP4-5Q9BYR2 181 aa4.16□□□□□ -1.74
LRP6-206ENST00000543091 PRKDCP78527 4128 aaKnown RBP4.13□□□□□ -1.75
LRP6-206ENST00000543091 KRTAP16-1A8MUX0 517 aa4.13□□□□□ -1.75
LRP6-206ENST00000543091 PLECQ15149 4684 aaKnown RBP4.13□□□□□ -1.75
LRP6-206ENST00000543091 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
LRP6-206ENST00000543091 R4GN34 69 aa4.12□□□□□ -1.75
LRP6-206ENST00000543091 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
LRP6-206ENST00000543091 A0A1B0GU33 70 aa4.1□□□□□ -1.75
LRP6-206ENST00000543091 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
LRP6-206ENST00000543091 VPS13DQ5THJ4 4388 aa4.08□□□□□ -1.76
LRP6-206ENST00000543091 A0A0D9SG42 100 aa4.07□□□□□ -1.76
LRP6-206ENST00000543091 DNAH11Q96DT5 4516 aa4.07□□□□□ -1.76
LRP6-206ENST00000543091 KRTAP25-1Q3LHN0 102 aa4.07□□□□□ -1.76
LRP6-206ENST00000543091 CAMK2N1Q7Z7J9 78 aa4.06□□□□□ -1.76
LRP6-206ENST00000543091 ROMO1P60602 79 aa4.05□□□□□ -1.76
LRP6-206ENST00000543091 ADM2Q7Z4H4 148 aa4.05□□□□□ -1.76
LRP6-206ENST00000543091 DNAH3Q8TD57 4116 aa4.05□□□□□ -1.76
LRP6-206ENST00000543091 DNAH1Q9P2D7 4330 aa4.04□□□□□ -1.76
LRP6-206ENST00000543091 STARD9Q9P2P6 4700 aa4.04□□□□□ -1.76
LRP6-206ENST00000543091 M0QZ58 72 aa4.04□□□□□ -1.76
LRP6-206ENST00000543091 DNAH5Q8TE73 4624 aa4.03□□□□□ -1.76
LRP6-206ENST00000543091 DNAH10Q8IVF4 4471 aa4□□□□□ -1.77
LRP6-206ENST00000543091 PLAC4Q8WY50 150 aa3.99□□□□□ -1.77
LRP6-206ENST00000543091 CMYA5Q8N3K9 4069 aa3.97□□□□□ -1.77
LRP6-206ENST00000543091 DYNC1H1Q14204 4646 aaKnown RBP3.96□□□□□ -1.78
LRP6-206ENST00000543091 DNAH17Q9UFH2 4485 aa3.95□□□□□ -1.78
LRP6-206ENST00000543091 DYNC2H1Q8NCM8 4307 aaKnown RBP3.94□□□□□ -1.78
LRP6-206ENST00000543091 KRTAP10-10P60014 251 aa3.92□□□□□ -1.78
LRP6-206ENST00000543091 A8MU10 97 aa3.92□□□□□ -1.78
LRP6-206ENST00000543091 LRP1BQ9NZR2 4599 aa3.91□□□□□ -1.78
LRP6-206ENST00000543091 RYR2Q92736 4967 aa3.89□□□□□ -1.79
LRP6-206ENST00000543091 KIAA1109Q2LD37 5005 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms