RNA–Protein interactions for RNA: ENST00000542953.1

NPIPB3-211, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-211ENST00000542953 A0A0B4J2C4 111 aa2.42□□□□□ -2.02
NPIPB3-211ENST00000542953 KRTAP9-6A8MVA2 160 aa2.42□□□□□ -2.02
NPIPB3-211ENST00000542953 TCL1BO95988 128 aa2.42□□□□□ -2.02
NPIPB3-211ENST00000542953 BVES-AS1Q5T3Y7 98 aa2.42□□□□□ -2.02
NPIPB3-211ENST00000542953 Q6JHZ5 121 aa2.42□□□□□ -2.02
NPIPB3-211ENST00000542953 PPDPFLQ8WWR9 84 aa2.42□□□□□ -2.02
NPIPB3-211ENST00000542953 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
NPIPB3-211ENST00000542953 F8WEM9 126 aa2.41□□□□□ -2.02
NPIPB3-211ENST00000542953 FXYD2P54710 66 aa2.41□□□□□ -2.02
NPIPB3-211ENST00000542953 CEND1Q8N111 149 aa2.41□□□□□ -2.02
NPIPB3-211ENST00000542953 H0YGX0 51 aa2.4□□□□□ -2.03
NPIPB3-211ENST00000542953 NDUFV3P56181 108 aaKnown RBP2.4□□□□□ -2.03
NPIPB3-211ENST00000542953 PYY3Q5JQD4 70 aa2.4□□□□□ -2.03
NPIPB3-211ENST00000542953 RAB37Q96AX2 223 aa2.4□□□□□ -2.03
NPIPB3-211ENST00000542953 OBSCN-AS1Q96MR7 158 aa2.4□□□□□ -2.03
NPIPB3-211ENST00000542953 Q96NJ1 140 aa2.4□□□□□ -2.03
NPIPB3-211ENST00000542953 VAMP8Q9BV40 100 aa2.4□□□□□ -2.03
NPIPB3-211ENST00000542953 SNHG12Q9BXW3 62 aa2.4□□□□□ -2.03
NPIPB3-211ENST00000542953 PRO1854Q9UHT4 67 aa2.4□□□□□ -2.03
NPIPB3-211ENST00000542953 A0A1W2PNM2 257 aa2.39□□□□□ -2.03
NPIPB3-211ENST00000542953 Q75L30 129 aa2.39□□□□□ -2.03
NPIPB3-211ENST00000542953 A0A1B0GX51 115 aa2.38□□□□□ -2.03
NPIPB3-211ENST00000542953 H3BMG7 143 aa2.38□□□□□ -2.03
NPIPB3-211ENST00000542953 K7ERJ3 54 aa2.38□□□□□ -2.03
NPIPB3-211ENST00000542953 LST1O00453 97 aa2.38□□□□□ -2.03
NPIPB3-211ENST00000542953 TEN1Q86WV5 123 aa2.38□□□□□ -2.03
NPIPB3-211ENST00000542953 A0A087WSZ3 146 aa2.37□□□□□ -2.03
NPIPB3-211ENST00000542953 A8MUU9 505 aa2.37□□□□□ -2.03
NPIPB3-211ENST00000542953 KRTAP16-1A8MUX0 517 aa2.37□□□□□ -2.03
NPIPB3-211ENST00000542953 C20orf166-AS1Q96NR2 134 aa2.37□□□□□ -2.03
NPIPB3-211ENST00000542953 FABP2P12104 132 aa2.36□□□□□ -2.03
NPIPB3-211ENST00000542953 DSCR10P59022 87 aa2.36□□□□□ -2.03
NPIPB3-211ENST00000542953 HSD52Q0P140 79 aa2.36□□□□□ -2.03
NPIPB3-211ENST00000542953 NOTCH2NLQ7Z3S9 236 aa2.36□□□□□ -2.03
NPIPB3-211ENST00000542953 KRTAP2-1Q9BYU5 128 aa2.36□□□□□ -2.03
NPIPB3-211ENST00000542953 SNCGO76070 127 aa2.35□□□□□ -2.03
NPIPB3-211ENST00000542953 ATP11AUNQ6ZP68 121 aa2.35□□□□□ -2.03
NPIPB3-211ENST00000542953 LINC00472Q9H8W2 130 aa2.35□□□□□ -2.03
NPIPB3-211ENST00000542953 SS18L2Q9UHA2 77 aa2.35□□□□□ -2.03
NPIPB3-211ENST00000542953 TRBV20-1A0A075B6N2 111 aa2.34□□□□□ -2.03
NPIPB3-211ENST00000542953 TRBV7-4A0A0J9YYF1 115 aa2.34□□□□□ -2.03
NPIPB3-211ENST00000542953 A0A1B0GV72 72 aa2.34□□□□□ -2.03
NPIPB3-211ENST00000542953 DEFB116Q30KQ4 102 aa2.34□□□□□ -2.03
NPIPB3-211ENST00000542953 ANKRD29Q8N6D5 301 aa2.34□□□□□ -2.03
NPIPB3-211ENST00000542953 ORMDL1Q9P0S3 153 aa2.34□□□□□ -2.03
NPIPB3-211ENST00000542953 UQCR10Q9UDW1 63 aa2.34□□□□□ -2.03
NPIPB3-211ENST00000542953 TMEM256-PLSCR3K7ERE1 68 aa2.33□□□□□ -2.04
NPIPB3-211ENST00000542953 PSMB2P49721 201 aa2.33□□□□□ -2.04
NPIPB3-211ENST00000542953 UBE2V1Q13404 147 aa2.33□□□□□ -2.04
NPIPB3-211ENST00000542953 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
NPIPB3-211ENST00000542953 H3BQ85 93 aa2.32□□□□□ -2.04
NPIPB3-211ENST00000542953 DNAL4O96015 105 aa2.32□□□□□ -2.04
NPIPB3-211ENST00000542953 TRACP01848 142 aa2.32□□□□□ -2.04
NPIPB3-211ENST00000542953 CCKP06307 115 aa2.32□□□□□ -2.04
NPIPB3-211ENST00000542953 IGKV4-1P06312 121 aa2.32□□□□□ -2.04
NPIPB3-211ENST00000542953 PCP4P48539 62 aa2.32□□□□□ -2.04
NPIPB3-211ENST00000542953 LINC00313P59037 77 aa2.32□□□□□ -2.04
NPIPB3-211ENST00000542953 MPLKIPQ8TAP9 179 aa2.32□□□□□ -2.04
NPIPB3-211ENST00000542953 COX6CP09669 75 aa2.31□□□□□ -2.04
NPIPB3-211ENST00000542953 HRES1P13985 223 aa2.31□□□□□ -2.04
NPIPB3-211ENST00000542953 SIGMAR1Q99720 223 aa2.31□□□□□ -2.04
NPIPB3-211ENST00000542953 IGHV6-1A0A0B4J1U7 121 aa2.3□□□□□ -2.04
NPIPB3-211ENST00000542953 A6NN06 94 aa2.3□□□□□ -2.04
NPIPB3-211ENST00000542953 BAALC-AS2P0C853 105 aa2.3□□□□□ -2.04
NPIPB3-211ENST00000542953 NAA38Q9BRA0 125 aaKnown RBP2.3□□□□□ -2.04
NPIPB3-211ENST00000542953 FAM236DA0A1B0GTK5 79 aa2.29□□□□□ -2.04
NPIPB3-211ENST00000542953 SCGB1C2P0DMR2 95 aa2.29□□□□□ -2.04
NPIPB3-211ENST00000542953 FAM236CP0DP71 79 aa2.29□□□□□ -2.04
NPIPB3-211ENST00000542953 RBM3P98179 157 aaKnown RBP2.29□□□□□ -2.04
NPIPB3-211ENST00000542953 Q6ZQT0 140 aa2.29□□□□□ -2.04
NPIPB3-211ENST00000542953 A0A1B0GVX0 72 aa2.28□□□□□ -2.04
NPIPB3-211ENST00000542953 VPS25Q9BRG1 176 aa2.28□□□□□ -2.04
NPIPB3-211ENST00000542953 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
NPIPB3-211ENST00000542953 A8MWP4 228 aa2.27□□□□□ -2.05
NPIPB3-211ENST00000542953 C9JAW5 83 aa2.27□□□□□ -2.05
NPIPB3-211ENST00000542953 C8orf87E5RJ46 101 aa2.27□□□□□ -2.05
NPIPB3-211ENST00000542953 SPRR2EP22531 72 aa2.27□□□□□ -2.05
NPIPB3-211ENST00000542953 SPRR2BP35325 72 aa2.27□□□□□ -2.05
NPIPB3-211ENST00000542953 SPRR2AP35326 72 aa2.27□□□□□ -2.05
NPIPB3-211ENST00000542953 DSCR8Q96T75 97 aa2.27□□□□□ -2.05
NPIPB3-211ENST00000542953 LOC110117498A0A087WWA1 95 aa2.26□□□□□ -2.05
NPIPB3-211ENST00000542953 IGKV3D-7A0A0C4DH55 119 aa2.26□□□□□ -2.05
NPIPB3-211ENST00000542953 J3KT08 172 aa2.26□□□□□ -2.05
NPIPB3-211ENST00000542953 M0R143 59 aa2.26□□□□□ -2.05
NPIPB3-211ENST00000542953 KRTAP10-12P60413 245 aa2.26□□□□□ -2.05
NPIPB3-211ENST00000542953 ATXN8Q156A1 80 aa2.26□□□□□ -2.05
NPIPB3-211ENST00000542953 ZCCHC13Q8WW36 166 aaKnown RBP2.26□□□□□ -2.05
NPIPB3-211ENST00000542953 RBM12B-AS1Q9P1G2 102 aa2.26□□□□□ -2.05
NPIPB3-211ENST00000542953 JMJD7-PLA2G4BH0Y9G9 81 aa2.25□□□□□ -2.05
NPIPB3-211ENST00000542953 SMIM6P0DI80 62 aa2.25□□□□□ -2.05
NPIPB3-211ENST00000542953 SPINK7P58062 85 aa2.25□□□□□ -2.05
NPIPB3-211ENST00000542953 C8orf17Q9NRJ1 99 aa2.25□□□□□ -2.05
NPIPB3-211ENST00000542953 LOC105371267A0A1B0GV96 52 aa2.24□□□□□ -2.05
NPIPB3-211ENST00000542953 A0A1B0GW54 56 aa2.24□□□□□ -2.05
NPIPB3-211ENST00000542953 C14orf132Q9NPU4 83 aa2.24□□□□□ -2.05
NPIPB3-211ENST00000542953 TAX1BP3O14907 124 aa2.23□□□□□ -2.05
NPIPB3-211ENST00000542953 MT1BP07438 61 aa2.23□□□□□ -2.05
NPIPB3-211ENST00000542953 PDE6GP18545 87 aa2.23□□□□□ -2.05
NPIPB3-211ENST00000542953 PRR15Q8IV56 129 aa2.23□□□□□ -2.05
NPIPB3-211ENST00000542953 SPRR2FQ96RM1 72 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms