RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 LYNX1G3V0Z9 82 aa2.05□□□□□ -2.08
SFSWAP-211ENST00000542813 NCR3O14931 201 aa2.05□□□□□ -2.08
SFSWAP-211ENST00000542813 LYNX1P0DP58 116 aa2.05□□□□□ -2.08
SFSWAP-211ENST00000542813 FAM74A4Q5TZK3 123 aa2.05□□□□□ -2.08
SFSWAP-211ENST00000542813 Q6ZQT0 140 aa2.05□□□□□ -2.08
SFSWAP-211ENST00000542813 PRO2289Q9P1D8 64 aa2.05□□□□□ -2.08
SFSWAP-211ENST00000542813 CDKN2A-AS1Q9UH64 79 aa2.05□□□□□ -2.08
SFSWAP-211ENST00000542813 DNAH3Q8TD57 4116 aa2.05□□□□□ -2.08
SFSWAP-211ENST00000542813 PLCE1Q9P212 2302 aa2.05□□□□□ -2.08
SFSWAP-211ENST00000542813 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.04□□□□□ -2.08
SFSWAP-211ENST00000542813 B4DSR2 109 aa2.04□□□□□ -2.08
SFSWAP-211ENST00000542813 G3V318 75 aa2.04□□□□□ -2.08
SFSWAP-211ENST00000542813 M0R2N4 97 aa2.04□□□□□ -2.08
SFSWAP-211ENST00000542813 NDUFB1O75438 58 aa2.04□□□□□ -2.08
SFSWAP-211ENST00000542813 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
SFSWAP-211ENST00000542813 SMIM11BQ8TCY0 68 aa2.04□□□□□ -2.08
SFSWAP-211ENST00000542813 ZCCHC13Q8WW36 166 aaKnown RBP2.04□□□□□ -2.08
SFSWAP-211ENST00000542813 LINC00467Q9BRT7 94 aa2.04□□□□□ -2.08
SFSWAP-211ENST00000542813 KIAA1109Q2LD37 5005 aa2.04□□□□□ -2.08
SFSWAP-211ENST00000542813 DNAH9Q9NYC9 4486 aa2.03□□□□□ -2.08
SFSWAP-211ENST00000542813 SPRR5A0A1B0GTR4 108 aa2.03□□□□□ -2.08
SFSWAP-211ENST00000542813 CRPP02741 224 aa2.03□□□□□ -2.08
SFSWAP-211ENST00000542813 Q6ZTI0 123 aa2.03□□□□□ -2.08
SFSWAP-211ENST00000542813 HERC1Q15751 4861 aa2.03□□□□□ -2.08
SFSWAP-211ENST00000542813 LYSTQ99698 3801 aa2.03□□□□□ -2.08
SFSWAP-211ENST00000542813 DNAH7Q8WXX0 4024 aa2.02□□□□□ -2.09
SFSWAP-211ENST00000542813 HECTD4Q9Y4D8 3996 aa2.02□□□□□ -2.09
SFSWAP-211ENST00000542813 TRBV10-1A0A0K0K1A3 114 aa2.02□□□□□ -2.09
SFSWAP-211ENST00000542813 P0C880 135 aa2.02□□□□□ -2.09
SFSWAP-211ENST00000542813 HAMPP81172 84 aa2.02□□□□□ -2.09
SFSWAP-211ENST00000542813 DEFB114Q30KQ6 69 aa2.02□□□□□ -2.09
SFSWAP-211ENST00000542813 CASC2Q6XLA1 102 aa2.02□□□□□ -2.09
SFSWAP-211ENST00000542813 PRR15LQ9BU68 103 aa2.02□□□□□ -2.09
SFSWAP-211ENST00000542813 IGKV3-7A0A075B6H7 116 aa2.01□□□□□ -2.09
SFSWAP-211ENST00000542813 CCL18P55774 89 aa2.01□□□□□ -2.09
SFSWAP-211ENST00000542813 MINOS1Q5TGZ0 78 aa2.01□□□□□ -2.09
SFSWAP-211ENST00000542813 Q8N814 137 aa2.01□□□□□ -2.09
SFSWAP-211ENST00000542813 A0A0G2JQZ4 141 aa2□□□□□ -2.09
SFSWAP-211ENST00000542813 NDUFA4O00483 81 aa2□□□□□ -2.09
SFSWAP-211ENST00000542813 SPINK13Q1W4C9 94 aa2□□□□□ -2.09
SFSWAP-211ENST00000542813 LINC00208Q96KT6 92 aa2□□□□□ -2.09
SFSWAP-211ENST00000542813 RHPN1-AS1Q9BWJ2 59 aa2□□□□□ -2.09
SFSWAP-211ENST00000542813 PLAC8Q9NZF1 115 aa2□□□□□ -2.09
SFSWAP-211ENST00000542813 STARD9Q9P2P6 4700 aa2□□□□□ -2.09
SFSWAP-211ENST00000542813 ALMS1Q8TCU4 4167 aa1.99□□□□□ -2.09
SFSWAP-211ENST00000542813 CNBPP62633 177 aaKnown RBP1.99□□□□□ -2.09
SFSWAP-211ENST00000542813 C5orf56Q8N8D9 126 aa1.99□□□□□ -2.09
SFSWAP-211ENST00000542813 C9orf163Q8N9P6 203 aa1.99□□□□□ -2.09
SFSWAP-211ENST00000542813 RETNLBQ9BQ08 111 aa1.99□□□□□ -2.09
SFSWAP-211ENST00000542813 LINC01558Q9Y6Z2 57 aa1.99□□□□□ -2.09
SFSWAP-211ENST00000542813 DMBT1Q9UGM3 2413 aaPredicted RBP1.99□□□□□ -2.09
SFSWAP-211ENST00000542813 TRBV6-4A0A1B0GX49 114 aa1.98□□□□□ -2.09
SFSWAP-211ENST00000542813 K7EIL1 84 aa1.98□□□□□ -2.09
SFSWAP-211ENST00000542813 IGLV1-51P01701 117 aa1.98□□□□□ -2.09
SFSWAP-211ENST00000542813 IGKV4-1P06312 121 aa1.98□□□□□ -2.09
SFSWAP-211ENST00000542813 PLECQ15149 4684 aaKnown RBP1.98□□□□□ -2.09
SFSWAP-211ENST00000542813 COX7B2Q8TF08 81 aa1.98□□□□□ -2.09
SFSWAP-211ENST00000542813 FRAS1Q86XX4 4008 aa1.98□□□□□ -2.09
SFSWAP-211ENST00000542813 WNK2Q9Y3S1 2297 aa1.97□□□□□ -2.09
SFSWAP-211ENST00000542813 TRGV2A0A075B6R0 118 aa1.97□□□□□ -2.09
SFSWAP-211ENST00000542813 TRGV4A0A0C4DH28 118 aa1.97□□□□□ -2.09
SFSWAP-211ENST00000542813 ETDCA0A1B0GVM5 59 aa1.97□□□□□ -2.09
SFSWAP-211ENST00000542813 A8MTW9 85 aa1.97□□□□□ -2.09
SFSWAP-211ENST00000542813 LINC00158P58513 81 aa1.97□□□□□ -2.09
SFSWAP-211ENST00000542813 TPRXLQ17RH7 258 aa1.97□□□□□ -2.09
SFSWAP-211ENST00000542813 LINC00575Q6W349 94 aa1.96□□□□□ -2.1
SFSWAP-211ENST00000542813 KCNQ1DNQ9H478 68 aa1.96□□□□□ -2.1
SFSWAP-211ENST00000542813 TOMM7Q9P0U1 55 aa1.96□□□□□ -2.1
SFSWAP-211ENST00000542813 COX7BP24311 80 aa1.95□□□□□ -2.1
SFSWAP-211ENST00000542813 ROMO1P60602 79 aa1.95□□□□□ -2.1
SFSWAP-211ENST00000542813 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
SFSWAP-211ENST00000542813 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
SFSWAP-211ENST00000542813 C1orf134Q5TEV5 83 aa1.95□□□□□ -2.1
SFSWAP-211ENST00000542813 C10orf99Q6UWK7 81 aa1.95□□□□□ -2.1
SFSWAP-211ENST00000542813 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.95□□□□□ -2.1
SFSWAP-211ENST00000542813 WFDC10AQ9H1F0 79 aa1.95□□□□□ -2.1
SFSWAP-211ENST00000542813 CSMD3Q7Z407 3707 aa1.95□□□□□ -2.1
SFSWAP-211ENST00000542813 DNAH10Q8IVF4 4471 aa1.94□□□□□ -2.1
SFSWAP-211ENST00000542813 H3BUA1 57 aa1.94□□□□□ -2.1
SFSWAP-211ENST00000542813 HTN1P15515 57 aa1.94□□□□□ -2.1
SFSWAP-211ENST00000542813 KRTAP10-1P60331 282 aa1.94□□□□□ -2.1
SFSWAP-211ENST00000542813 SPACA4Q8TDM5 124 aa1.94□□□□□ -2.1
SFSWAP-211ENST00000542813 USMG5Q96IX5 58 aa1.94□□□□□ -2.1
SFSWAP-211ENST00000542813 DNAH11Q96DT5 4516 aa1.93□□□□□ -2.1
SFSWAP-211ENST00000542813 HUWE1Q7Z6Z7 4374 aaKnown RBP1.93□□□□□ -2.1
SFSWAP-211ENST00000542813 IGKV3OR2-268A0A0C4DH90 116 aa1.93□□□□□ -2.1
SFSWAP-211ENST00000542813 SPINK7P58062 85 aa1.93□□□□□ -2.1
SFSWAP-211ENST00000542813 DEFB131AP59861 70 aa1.93□□□□□ -2.1
SFSWAP-211ENST00000542813 DEFB112Q30KQ8 113 aa1.93□□□□□ -2.1
SFSWAP-211ENST00000542813 PKHD1P08F94 4074 aa1.92□□□□□ -2.1
SFSWAP-211ENST00000542813 LINC00959A0A1B0GUT2 108 aa1.92□□□□□ -2.1
SFSWAP-211ENST00000542813 H0Y9P7 68 aa1.92□□□□□ -2.1
SFSWAP-211ENST00000542813 SPAG11BQ08648 103 aa1.92□□□□□ -2.1
SFSWAP-211ENST00000542813 CSAG1Q6PB30 78 aa1.92□□□□□ -2.1
SFSWAP-211ENST00000542813 SPAG11AQ6PDA7 123 aa1.92□□□□□ -2.1
SFSWAP-211ENST00000542813 BRD3OSQ6XYD6 125 aa1.92□□□□□ -2.1
SFSWAP-211ENST00000542813 Q6ZQY7 126 aa1.92□□□□□ -2.1
SFSWAP-211ENST00000542813 COA5Q86WW8 74 aa1.92□□□□□ -2.1
SFSWAP-211ENST00000542813 TRGV1A0A0A0MS02 117 aa1.91□□□□□ -2.1
SFSWAP-211ENST00000542813 H3BUX3 64 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms