RNA–Protein interactions for RNA: ENST00000542700.6

CHMP4A-209, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3

Gene CHMP4A, Length 847 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-209ENST00000542700 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
CHMP4A-209ENST00000542700 KMT2DO14686 5537 aa4.22□□□□□ -1.73
CHMP4A-209ENST00000542700 A0A0G2JQZ4 141 aa4.22□□□□□ -1.73
CHMP4A-209ENST00000542700 CCKP06307 115 aa4.22□□□□□ -1.73
CHMP4A-209ENST00000542700 LINC00483Q53H64 154 aa4.22□□□□□ -1.73
CHMP4A-209ENST00000542700 PDE6GP18545 87 aa4.21□□□□□ -1.74
CHMP4A-209ENST00000542700 MOBPQ13875 183 aa4.21□□□□□ -1.74
CHMP4A-209ENST00000542700 LOC110117498A0A087WWA1 95 aa4.2□□□□□ -1.74
CHMP4A-209ENST00000542700 TRBV7-4A0A0J9YYF1 115 aa4.2□□□□□ -1.74
CHMP4A-209ENST00000542700 K7ERU9 68 aa4.2□□□□□ -1.74
CHMP4A-209ENST00000542700 FAM229BQ4G0N7 80 aa4.2□□□□□ -1.74
CHMP4A-209ENST00000542700 Q6JHZ5 121 aa4.2□□□□□ -1.74
CHMP4A-209ENST00000542700 IGFL1Q6UW32 110 aa4.2□□□□□ -1.74
CHMP4A-209ENST00000542700 HRCT1Q6UXD1 115 aa4.2□□□□□ -1.74
CHMP4A-209ENST00000542700 Q6ZQT0 140 aa4.2□□□□□ -1.74
CHMP4A-209ENST00000542700 SSBP3-AS1Q7Z2R9 100 aa4.2□□□□□ -1.74
CHMP4A-209ENST00000542700 Q8NBF4 154 aa4.19□□□□□ -1.74
CHMP4A-209ENST00000542700 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
CHMP4A-209ENST00000542700 C21orf62-AS1Q17RA5 79 aa4.18□□□□□ -1.74
CHMP4A-209ENST00000542700 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
CHMP4A-209ENST00000542700 A0A1W2PNM2 257 aa4.17□□□□□ -1.74
CHMP4A-209ENST00000542700 ACYP1P07311 99 aa4.17□□□□□ -1.74
CHMP4A-209ENST00000542700 NREPQ16612 68 aa4.15□□□□□ -1.75
CHMP4A-209ENST00000542700 SPAG11AQ6PDA7 123 aa4.15□□□□□ -1.75
CHMP4A-209ENST00000542700 MT2AP02795 61 aa4.14□□□□□ -1.75
CHMP4A-209ENST00000542700 UBL5Q9BZL1 73 aa4.14□□□□□ -1.75
CHMP4A-209ENST00000542700 A0A087WSZ3 146 aa4.13□□□□□ -1.75
CHMP4A-209ENST00000542700 TRBV7-7A0A0K0K1E9 115 aa4.13□□□□□ -1.75
CHMP4A-209ENST00000542700 A0A1B0GW54 56 aa4.13□□□□□ -1.75
CHMP4A-209ENST00000542700 KRTAP9-3Q9BYQ3 159 aa4.13□□□□□ -1.75
CHMP4A-209ENST00000542700 FAM240AA0A1B0GVK7 77 aa4.12□□□□□ -1.75
CHMP4A-209ENST00000542700 CD164Q04900 197 aa4.12□□□□□ -1.75
CHMP4A-209ENST00000542700 Q6Q795 121 aa4.12□□□□□ -1.75
CHMP4A-209ENST00000542700 MT1FP04733 61 aa4.11□□□□□ -1.75
CHMP4A-209ENST00000542700 Q6ZVQ6 151 aa4.11□□□□□ -1.75
CHMP4A-209ENST00000542700 IGKV3D-7A0A0C4DH55 119 aa4.1□□□□□ -1.75
CHMP4A-209ENST00000542700 DEFB116Q30KQ4 102 aa4.1□□□□□ -1.75
CHMP4A-209ENST00000542700 SS18L2Q9UHA2 77 aa4.1□□□□□ -1.75
CHMP4A-209ENST00000542700 MDN1Q9NU22 5596 aa4.1□□□□□ -1.75
CHMP4A-209ENST00000542700 SPINK1P00995 79 aa4.09□□□□□ -1.75
CHMP4A-209ENST00000542700 LINC00643Q86TS7 51 aa4.09□□□□□ -1.75
CHMP4A-209ENST00000542700 LIMD2Q9BT23 127 aa4.09□□□□□ -1.75
CHMP4A-209ENST00000542700 BPY2O14599 106 aa4.08□□□□□ -1.76
CHMP4A-209ENST00000542700 IGKV4-1P06312 121 aa4.07□□□□□ -1.76
CHMP4A-209ENST00000542700 SIGMAR1Q99720 223 aa4.07□□□□□ -1.76
CHMP4A-209ENST00000542700 KRTAP10-10P60014 251 aa4.06□□□□□ -1.76
CHMP4A-209ENST00000542700 J3KT08 172 aa4.05□□□□□ -1.76
CHMP4A-209ENST00000542700 MT-ATP8P03928 68 aa4.05□□□□□ -1.76
CHMP4A-209ENST00000542700 HIST1H4AP62805 103 aaKnown RBP4.05□□□□□ -1.76
CHMP4A-209ENST00000542700 LINC00472Q9H8W2 130 aa4.05□□□□□ -1.76
CHMP4A-209ENST00000542700 NDUFB1O75438 58 aa4.04□□□□□ -1.76
CHMP4A-209ENST00000542700 C1orf195Q5TG92 126 aa4.04□□□□□ -1.76
CHMP4A-209ENST00000542700 C9orf92A6NGG3 77 aa4.03□□□□□ -1.76
CHMP4A-209ENST00000542700 RPS29P62273 56 aaKnown RBP4.03□□□□□ -1.76
CHMP4A-209ENST00000542700 CXCL6P80162 114 aa4.03□□□□□ -1.76
CHMP4A-209ENST00000542700 Q5XG85 94 aa4.03□□□□□ -1.76
CHMP4A-209ENST00000542700 DSCR10P59022 87 aa4.02□□□□□ -1.77
CHMP4A-209ENST00000542700 ATP5EP2Q5VTU8 51 aa4.02□□□□□ -1.77
CHMP4A-209ENST00000542700 Q96NJ1 140 aa4.02□□□□□ -1.77
CHMP4A-209ENST00000542700 Q8N9L7 120 aa4.01□□□□□ -1.77
CHMP4A-209ENST00000542700 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
CHMP4A-209ENST00000542700 KRTAP2-1Q9BYU5 128 aa4.01□□□□□ -1.77
CHMP4A-209ENST00000542700 IGHV6-1A0A0B4J1U7 121 aa4□□□□□ -1.77
CHMP4A-209ENST00000542700 A8MWP4 228 aa4□□□□□ -1.77
CHMP4A-209ENST00000542700 K7EQZ3 153 aa4□□□□□ -1.77
CHMP4A-209ENST00000542700 IMUPQ9GZP8 106 aa4□□□□□ -1.77
CHMP4A-209ENST00000542700 A0A087WVE0 104 aa3.99□□□□□ -1.77
CHMP4A-209ENST00000542700 A0A1B0GVX0 72 aa3.98□□□□□ -1.77
CHMP4A-209ENST00000542700 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
CHMP4A-209ENST00000542700 WFDC13Q8IUB5 93 aa3.98□□□□□ -1.77
CHMP4A-209ENST00000542700 PRR15Q8IV56 129 aa3.98□□□□□ -1.77
CHMP4A-209ENST00000542700 LINC00313P59037 77 aa3.97□□□□□ -1.77
CHMP4A-209ENST00000542700 C8orf17Q9NRJ1 99 aa3.97□□□□□ -1.77
CHMP4A-209ENST00000542700 SCGB1A1P11684 91 aa3.96□□□□□ -1.78
CHMP4A-209ENST00000542700 HCG22E2RYF7 251 aa3.95□□□□□ -1.78
CHMP4A-209ENST00000542700 C8orf87E5RJ46 101 aa3.95□□□□□ -1.78
CHMP4A-209ENST00000542700 CASC2Q6XLA1 102 aa3.95□□□□□ -1.78
CHMP4A-209ENST00000542700 FAM236AA0A1B0GUQ0 79 aa3.94□□□□□ -1.78
CHMP4A-209ENST00000542700 FAM236BA0A1B0GV22 79 aa3.94□□□□□ -1.78
CHMP4A-209ENST00000542700 hDV103S1A0JD37 113 aa3.94□□□□□ -1.78
CHMP4A-209ENST00000542700 NOTCH2NLQ7Z3S9 236 aa3.94□□□□□ -1.78
CHMP4A-209ENST00000542700 MMP24-AS1A0A0U1RRL7 71 aa3.93□□□□□ -1.78
CHMP4A-209ENST00000542700 NDUFS5O43920 106 aa3.93□□□□□ -1.78
CHMP4A-209ENST00000542700 RPL37P61927 97 aaKnown RBP3.93□□□□□ -1.78
CHMP4A-209ENST00000542700 TMEM254Q8TBM7 123 aa3.92□□□□□ -1.78
CHMP4A-209ENST00000542700 MRPL34Q9BQ48 92 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-209ENST00000542700 ATOX1O00244 68 aa3.88□□□□□ -1.79
CHMP4A-209ENST00000542700 KRTAP16-1A8MUX0 517 aa3.87□□□□□ -1.79
CHMP4A-209ENST00000542700 SPRR2EP22531 72 aa3.87□□□□□ -1.79
CHMP4A-209ENST00000542700 SPRR2BP35325 72 aa3.87□□□□□ -1.79
CHMP4A-209ENST00000542700 SPRR2AP35326 72 aa3.87□□□□□ -1.79
CHMP4A-209ENST00000542700 SMIM20Q8N5G0 67 aa3.87□□□□□ -1.79
CHMP4A-209ENST00000542700 ANAPC13Q9BS18 74 aa3.87□□□□□ -1.79
CHMP4A-209ENST00000542700 TRAV7A0A075B6U4 112 aa3.86□□□□□ -1.79
CHMP4A-209ENST00000542700 TP53AIP1Q9HCN2 124 aa3.86□□□□□ -1.79
CHMP4A-209ENST00000542700 UQCRQO14949 82 aa3.85□□□□□ -1.79
CHMP4A-209ENST00000542700 Q8N9P0 234 aaPredicted RBP3.85□□□□□ -1.79
CHMP4A-209ENST00000542700 C20orf166-AS1Q96NR2 134 aa3.85□□□□□ -1.79
CHMP4A-209ENST00000542700 A8MUU9 505 aa3.83□□□□□ -1.8
CHMP4A-209ENST00000542700 C5orf47Q569G3 176 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms